Cucurbita maxima (winter squash): 111488550
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Entry
111488550 CDS
T05246
Name
(RefSeq) pre-mRNA-processing protein 40C
KO
K12824
transcription elongation regulator 1
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111488550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmax03041
]
111488550
Spliceosome [BR:
cmax03041
]
Complex A
U1 snRNP components
U1 related factors
111488550
Complex B
111488550
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
Glyco_hyd_101C
RhoGAP-FF1
Motif
Other DBs
NCBI-GeneID:
111488550
NCBI-ProteinID:
XP_022992104
UniProt:
A0A6J1JUS6
LinkDB
All DBs
Position
Unknown
AA seq
841 aa
AA seq
DB search
MSSASTVSQSMSLPAPPTSNSAANGSSIPNLIPATLPVPPAQSFHIHQLAPGTPMVPGPP
GMSPSMPVMFPPSDSSASSTIPGPNMHAAPNSINTSVRPQICGSYPSLAPVVSPPHAIWF
QPPQLGGMPRPPFLPYPASYHGPLPFPARGMHLPSVPLPDPQPPGVTPVQVSSATAVPST
HGSHLTGNSLIQTDFNHPELDAHKHAQGMGQSESISLSKHSENWTAHKTESGIMYYYNAL
TGESTYEKPSGFKGEPDNLMVQPTSVSMSNLSGTDWVLVTMGDGKKYYYNNKTKISSWQI
PNEVTELRQQNDEKTKEHSAPLPNNHALTEPGSSPISMNTPAINTGGREAMPLRTVGVSG
PSSALDLIKKKLQESGTPVASSPISAPTIAQSDVNLPRDADAAVKALQTENSKVKPKDAN
GDGNVSDSSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFDPRFKAIP
SYSARRSLFEHFVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEDIDHTTSYQTFKKKWG
NDPRFEALDRKDRENLLSERVLCLKKAAVEKAQALWAASTTSFKSMLQERGDINVNSRWL
RVKDSLRDDPRYRSVKHEDREMLFNEYISELKAVEEEKQRESKAKKEEQEKLKEREREWR
KRKEREEQEMERVRLKVRKKEAVASFQALLVESIKDPQASWSESKVKLEKDPQGRASNPD
LDSSDTEKLFREHVKMLQERCANEFRTLLSEAFTAEVVSQASEDGKTVLNSWTMAKRTLK
PDPRYSKLPRKEREALWRRYADDTLRKQKSANDHKVEKHSNSKSRSTNVAGKLPSKPRIH
E
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgcatcaaccgtctcccaatctatgtcactacctgctcctcctacttctaat
tctgcagctaatggatcttcaattcccaatttgattccggccactttaccagttcctcct
gcccaatctttccatattcaccaactagcgcctggaactccgatggtacctggtccaccg
ggaatgtcaccgtctatgccagttatgtttccacctagcgattcatctgcttcttccact
atcccaggacccaatatgcatgcagctcctaactcaataaatacttctgttcgtccacaa
atatgtggttcctatccttctctagctcccgttgtttctccacctcatgcgatctggttt
cagcctcctcagttgggaggcatgcccagacctccctttctgccgtaccctgcttcttat
catggcccgcttccttttcctgcccgtggaatgcacctaccttctgttccattgcccgat
cctcaacctcctggtgttacccctgttcaagtttcatcggccactgctgtgccatctact
catggaagtcatcttactggaaattcgttgatccagacagacttcaatcatcctgaactt
gatgcccataaacacgctcaaggtatgggccaatctgagagtatttctttaagtaagcac
tcggagaattggactgcccacaagactgagtcaggaataatgtactactataatgccttg
acaggagaatctacttatgaaaagccttctggatttaaaggggagcctgacaatctcatg
gtgcaaccaacatctgtttcaatgtcaaacctgtccggtacggattgggttttggttact
atgggtgatggtaaaaagtattactacaacaacaagacaaagataagcagttggcagatc
ccaaatgaagtaactgaattgaggcagcagaatgatgaaaaaacaaaagaacattcagct
cctttgccaaataatcatgcgttgactgaaccaggatcttcccctatcagtatgaatact
cctgccatcaacacaggaggtcgtgaagccatgcctcttagaactgtaggagtttcaggg
ccatcttctgccctggatttgatcaagaaaaaattgcaagagtctggaactcctgtagct
tcctcgcctatttcagctccaacaatagctcaatcagatgtgaatctgccgagagatgct
gatgctgcagttaaggcactgcagactgagaacagcaaggttaagccgaaagatgccaat
ggtgatggaaatgtatccgactcctcctcggactctgaggatgtagacagtggaccaact
aatgagcagttaattattcagtttaaggaaatgcttaaggagcggggagtggcaccattc
tctaaatgggacaaggaattgccgaagatagtttttgatccccgttttaaggctattcct
agttattcagctaggaggtccttgtttgaacactttgttaagacccgtgctgaggaggaa
cgtaaggagaaaagagctgctcagaaggctgcaatagagggatttaaacagttactggat
agtgcatctgaggatattgatcacacaactagttatcaaacattcaaaaagaaatggggc
aatgacccgcggtttgaagctttggatcgtaaggatcgggagaatttattgagtgaaagg
gtcctttgtctgaagaaggctgccgttgaaaaggctcaagctttatgggctgcttccacc
acgagtttcaagtccatgctgcaggagagaggagatatcaacgtcaattcccgttggttg
agggtaaaagatagtctacgggatgacccaagatatagatctgttaagcatgaggaccgt
gagatgttattcaacgagtacatatctgaacttaaggctgttgaggaagaaaagcagcgc
gagtcaaaagctaaaaaggaggagcaggagaaactgaaggaaagggagagagaatggcgg
aaacggaaggaaagagaagagcaagaaatggaaagggtgcgcctaaaagtacggaagaaa
gaggctgttgcatcttttcaagcattgcttgttgagtcgatcaaagaccctcaggcctct
tggtctgagtcaaaagttaaattggagaaggatccgcaagggcgtgcatccaatcctgat
ttagattcatctgacacagaaaagctattcagagaacatgtaaagatgctgcaagagcgg
tgtgcaaacgagtttagaactctattatctgaagcatttacagccgaggtagtttctcag
gcatctgaagatggaaagacagttcttaattcatggacaatggccaaacgaacattgaaa
cccgatcccagatacagtaaactcccaaggaaggaaagggaagcactttggcgtcgatat
gctgatgatacattgcggaagcagaagtcagcaaatgatcacaaggtagaaaaacatagc
aattcaaagagtagatcaaccaatgtcgctggaaaattaccttctaaaccaagaattcac
gagtga
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