Clavibacter nebraskensis: CMN_00896
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Entry
CMN_00896 CDS
T02530
Symbol
gabD
Name
(GenBank) putative succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
cmc
Clavibacter nebraskensis
Pathway
cmc00250
Alanine, aspartate and glutamate metabolism
cmc00310
Lysine degradation
cmc00350
Tyrosine metabolism
cmc00650
Butanoate metabolism
cmc00760
Nicotinate and nicotinamide metabolism
cmc01100
Metabolic pathways
cmc01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
cmc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
CMN_00896 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CMN_00896 (gabD)
00310 Lysine degradation
CMN_00896 (gabD)
00350 Tyrosine metabolism
CMN_00896 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
CMN_00896 (gabD)
Enzymes [BR:
cmc01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
CMN_00896 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
CMN_00896 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
CMN_00896 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
CCE74852
UniProt:
M5B7D5
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Position
916259..917734
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AA seq
491 aa
AA seq
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MSASTETDLLSGTPTTLLIAGERVDAEGGSTFEVRDPATDAVIAHVADASPADGARALDA
AVDAQAAWAATAPRARGEILRRAFDLLQERKDEFALLMTLEMGKPLAESLGEVTYGGEFL
RWFSEEAVRITGRYGTNPEGTGRMIVSQHPVGPVLLITPWNFPLAMATRKIAPALAAGCT
VVIKPADLTPLTTLRFAELLAEAGLPAGVLNVIPTTEAADVTGPLIADPRLRKLSFTGST
PVGRQLGAQAAQNVLRVSLELGGNAPFMVFADADLDEAVEGAMAAKFRNVGQACTAANRF
IVEASIADAFADRLQERIDRMRIGRGTEEGVTVGPLIDGRAVDKADRLVRDAVERGATVR
AGGAPGEGVGHFYPPTLVTGVAEGSDILREEIFGPVVAIVPFNDEDDAVRLANDTEFGLV
SYVFTRDLARGQRMIERLETGMTGLNMGVISNAAAPFGGVKQSGLGREGGLEGIHEYLNT
KYTLTPDPFAS
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcatccaccgagaccgacctcctgtcgggcacgcccaccaccctgctcatcgcg
ggcgagcgggtggacgcggagggcgggtcgacgttcgaggtccgggatcccgcgaccgac
gccgtcatcgcgcacgtcgccgacgcgagccccgcggacggcgcgcgcgccctcgacgcg
gcggtcgacgcgcaggcggcgtgggcggcgacggcgccgcgcgcccggggcgagatcctc
cgccgcgcgttcgacctgctccaggagcgcaaggacgagttcgcgctcctcatgacgctc
gagatgggcaagccgctggccgagtcgctcggcgaggtgacctacggaggcgagttcctc
cgctggttctccgaggaggccgtgcgcatcacgggccgctacggcacgaaccccgagggg
accggccgcatgatcgtgtcgcagcatccggtcgggccggtgctgctcatcaccccctgg
aacttcccgctcgcgatggcgacccgcaagatcgcgccggcgctcgccgcgggctgcacc
gtggtcatcaagcctgccgacctcacgccgctcaccacgctccggttcgccgagctgctg
gccgaggcggggctgcccgcgggcgtcctcaacgtgatccccaccacggaggccgccgac
gtcaccggcccgctcatcgccgacccgcggctccgcaagctgagcttcaccggatccacg
cccgtcggccgccagctcggcgcgcaggccgcgcagaacgtgctgcgcgtctcgctcgag
ctcggcggcaacgcgccgttcatggtcttcgccgacgccgacctcgacgaggccgtggag
ggcgccatggcggcgaagttccgcaacgtcgggcaggcgtgcacggcggcgaaccgcttc
atcgtcgaggcgtcgatcgcggacgcgttcgccgaccggctgcaggagcgcatcgaccgg
atgcggatcggccgcggcaccgaggagggcgtcacggtcggaccgctcatcgacggccgc
gccgtcgacaaggccgaccggctggtgcgcgacgccgtcgagcgcggcgccaccgtgcgc
gcgggcggcgcgcccggcgagggcgtgggccacttctacccgccgacgctcgtcacgggc
gtcgccgagggcagcgacatcctgcgggaggagatcttcgggccggtcgtcgcgatcgtg
ccgttcaacgacgaggacgacgcagtgcggctcgccaacgacaccgagttcgggctcgtc
tcctacgtcttcacccgggacctcgcccgcggacagcggatgatcgagcggctcgagacg
ggcatgaccggcctcaacatgggcgtcatctccaacgccgccgcgccgttcggcggcgtg
aagcagtcggggctcggccgggagggcgggctcgaggggatccacgagtacctgaacacg
aagtacacgctcacgcccgaccccttcgcgtcgtag
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