Clavibacter nebraskensis: CMN_02942
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Entry
CMN_02942 CDS
T02530
Symbol
ddlB
Name
(GenBank) D-alanine-D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
cmc
Clavibacter nebraskensis
Pathway
cmc00470
D-Amino acid metabolism
cmc00550
Peptidoglycan biosynthesis
cmc01100
Metabolic pathways
cmc01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
cmc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CMN_02942 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CMN_02942 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CMN_02942 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cmc01011
]
CMN_02942 (ddlB)
Enzymes [BR:
cmc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
CMN_02942 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
cmc01011
]
Precursor biosynthesis
Amino acid ligase
CMN_02942 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
TTL
ATPgrasp_YheCD
CPSase_L_D2
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
CCE76866
UniProt:
M5BE36
LinkDB
All DBs
Position
3056576..3057541
Genome browser
AA seq
321 aa
AA seq
DB search
MTAHEPLSVLVLAGGISHERDVSLRSGRRVADALRAAGVQVSLRDPDATLLDFLRDTPPA
VVWPVLHGASGEDGALLGLLELAGVPYVGSSARSARLAWDKPTAKAIAESADIRTPRSVT
LPKDTFRELGAAAVLRLVAESVPAPYAVKPARGGSAQGVTIVSDADALPRAMVDAYTYGD
VALIEQLVVGTEVAIGVLDTGDGPEALPATEIVPTSGVYGYEARYNAGLTRFFTPARISP
DASSAASATAVDIHRALGIGQMSRVDIIIDAAGDPWFIEVNVIPGLTETSLLPQGLAAAG
VEVGDLYRRLAEAAREPSVDR
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcacacgagcccctctccgtcctcgtcctggcaggcggcatctcccacgagcgg
gatgtgtccctccgcagcggtcgccgcgtcgcggacgccctgcgtgccgcgggcgtacag
gtctccctccgcgatcccgacgccaccctcctcgacttcctccgcgacacccctccggcc
gtcgtctggccggtcctccacggggcgagcggcgaggacggcgcgctcctcggactcctc
gagctcgccggcgtcccctacgtcggctcctccgcacggtccgcccggctcgcgtgggac
aagccgaccgcgaaggcgatcgcggagtccgccgacatccgcacaccgcgatccgtgacc
ctccccaaggacacgttccgcgagctcggtgcggccgccgtcctgcgcctcgtcgccgag
tccgtgcccgccccctacgccgtcaagccggcgcgtggcggctcggcgcagggcgtcacc
atcgtgagcgacgccgacgcgctgccgcgggccatggtggacgcctacacctacggcgac
gtcgccctgatcgagcagctcgtggtgggcaccgaggtcgcgatcggcgtcctcgacacg
ggtgacgggcccgaggccctgccggcgacggagatcgtgcccacgtcgggcgtgtacggc
tacgaggctcggtacaacgcgggcctgacgcgcttcttcacccccgcgcgcatctccccc
gacgcgtcctccgccgcgtccgcgacggccgtcgacatccaccgtgcgctcgggatcggg
cagatgtcgcgggtggacatcatcatcgacgcggctggcgatccctggttcatcgaggtg
aacgtgatccccggcctgaccgagacgtcgttgctcccgcagggcctcgcggccgcgggc
gtcgaggtgggcgacctctaccgccggctggccgaggctgctcgggaaccgtccgtcgac
cgctga
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