Cyanidioschyzon merolae: CYME_CMG025C
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Entry
CYME_CMG025C CDS
T00175
Name
(RefSeq) unknown RNA binding protein
Organism
cme
Cyanidioschyzon merolae
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Gene cluster
GFIT
Motif
Pfam:
SET
RRM_1
N-SET
Motif
Other DBs
NCBI-GeneID:
16993315
NCBI-ProteinID:
XP_005535843
UniProt:
M1VBA7
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Position
7:65245..68700
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AA seq
1151 aa
AA seq
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MSVAKRKRRPAVQELHGHVEGWDGPEYAFLLPVGAAAWRLRFDAWSGALAGSTVVPEREP
VEGSAFPAQAGRQFSVEGFLTSTRRLSVHTAPKSQAEAEADVQLRPCDPRKHPDSLGTGH
CRLRLLPAFPSDANDANDERTLIVLHLNRAITEAYLVAQFGRYGPVEQALVHCDERGTPM
GFASIRMKSKDACRQALREMHNKILMGSRIQVFVDPGGDTAAARRRALIDRRNRWEQEQR
AQLEKHRRPVEAQALDAAAGARGVPHASQRPADRLSLTSDQQGASPAANGARADTLGVQG
PDDRLILASDQQRTSPVMTASSAQHAAVTRYASRDERDPRQRATCAGRHGLVRSVQASLV
NDASRRAFADAPELDRERPNHADRSVSGLDAYRSATARGTIAGNASRTESGVSVARTGAP
TAGGSFSEDARVIQVAGVPVKTPRSVLMSAFRRFGKILRIKGCAEPGKRDASESAVTSTE
AESQTRTFLMYFRTREQALEAAAHMDQHMIMGKRVRVSCVVDQAVASGSRPEIGNVRDDA
VEGAGHAQGLLSRASMGANGRLVHSGASGHPSWKRLSERGRSCTNAPSGVTEDAAVRGRV
AGDRTLYNAAKPVCPTNFLVSTEIHAVRLSTLPFNTPHYELNEALASAPCSVRTVARAPF
WYVLFADAADLYRFTRWLRSRNQELLGCSILFEACRVTLAEDGSGIHEVTLMRAERSFAT
RLELLDAIGDIFEGQVRHALLRDLHREILDKVAQQVMETFEARMREKLARQRLESGGDKA
AKPPRMGSVSLDVLPELAMRQRSRRSPGSQPGAPPDPQSAVEKGASASSAVAELARLSSR
SSLDRAAHDSLSVSLLEDVAPDEDQVYLQRVLECCFQPTDDVPPQLSASIVSTLDQDKSD
IATRYREHWSPYLETLFDTHGICIKQKLQEPEPPANSTGCARTEGYAAFSRELKAFRWRP
PKQVIIPADEARRWSATGSLRGTRVEQRQLLSAVSDREQTVLYLQQRERFLRFYRSGIHG
YGLWALEDIPAGDYIIEYRGELVRSAVADLRERAYRQQGMGDSFMFRIDADTVVDATHIG
SVARFVNHSCDPNAIARIVQLGGASHILFYSKRSICVGEEITYDYNFDIEDDASEKVPCL
CGAPNCRQYLN
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcgcgaaacgaaaacgaagacctgctgtgcaggagcttcacggacatgtcgaa
ggctgggacggtcccgagtacgcattcttgctgccggtaggcgctgctgcgtggcgtctg
cgtttcgacgcatggtcaggtgccctggccggctctaccgtcgtgccggagcgggagccc
gtggagggttcggcttttccggctcaggcgggccgtcagttctcagtagagggtttcctc
actagcacgaggaggctgtcagtgcatacagcgccaaaatcgcaggcagaggcggaggcg
gacgtacagctgagaccctgcgacccgcgcaagcaccccgactcgttgggaacgggacat
tgcaggcttcgccttcttcccgcgtttccgtcagacgcgaatgatgcgaatgatgaacga
acattgatcgttttgcatctgaatagggcgataacagaagcctaccttgtagcccagttt
gggcgctacggtcccgtagagcaggcgctcgtgcattgcgacgagcggggcacccccatg
ggatttgcgagcatccgcatgaagtccaaagacgcgtgccgtcaagcgcttcgtgaaatg
cacaacaaaatactcatgggctctcgaatacaagtgtttgttgatccaggcggagatacg
gctgccgctcgacgacgagcgttaatcgatagaaggaaccgctgggagcaggagcaacga
gcacaactggagaagcatcgtcggcctgttgaagcacaggcgctagatgcagctgccggt
gctcgtggcgttccccacgctagccagcgacctgctgatcgattgagtttgacgtccgac
cagcaaggcgctagtccggcggcgaatggcgctagagccgatactcttggtgtacaggga
cctgacgatcgactgattttggcgtcagatcagcaacgtaccagcccagtaatgactgca
agcagcgcacagcacgctgctgtgactcgatatgcttcacgagacgaacgcgaccctcgg
caacgagcgacttgcgctgggcgtcatggtctcgtacggagcgtgcaagcgtctctggtg
aatgacgcgagtcgccgtgcattcgctgacgcacccgaactggatagggagcgcccaaat
cacgctgacaggtcggtttcgggtctggatgcgtaccgctcagcaacagcacgaggtacg
atcgccgggaatgcctcccgtactgaatcgggggtcagcgtggcccgaacaggggcacca
accgctggtggcagcttttccgaagatgccagggtcattcaagtggcgggcgttccggta
aagacgccgagatccgtactcatgtcggcgtttcgacgattcggtaagattcttcggatc
aaaggatgtgcagagcctgggaagcgcgatgccagcgagtcagcggtaacgtcgaccgaa
gcggaatcgcaaacccgtacgttcctcatgtacttcagaacgagggagcaggcgctagaa
gctgcagctcacatggatcagcacatgatcatggggaagcgtgttcgagtctcgtgtgtt
gtcgaccaggcagtggcgtccggttcgcgtcccgaaattggaaacgtcagggatgacgct
gtagagggcgcaggacatgcccagggactcttgtcgagagcgtcgatgggtgcaaatggg
cgactggtccattcgggggcatctgggcatccatcttggaagcgactttcagaaagagga
cgcagctgcaccaatgcgccgtcaggcgttaccgaggacgctgccgtacggggacgcgtc
gccggagaccgcactttatacaatgcagcaaagccggtctgtccgacaaacttcttggtt
tccactgagattcacgcggtgcgtctgagcacgctaccgttcaatacaccgcactatgaa
cttaatgaggcgttggcgagcgctccctgttctgtgcgaactgtcgctcgagcgcccttc
tggtacgtcctcttcgctgacgccgccgatttgtatcgctttacacgttggcttcgcagt
cgtaaccaggagctgctcggttgtagcattctgttcgaggcttgccgggtaacactcgca
gaggacggctccggaatccacgaggtgacgctcatgagggctgagcgttcctttgcgacg
cgcctggaactcctggatgcgattggcgacatcttcgaagggcaagtgcgtcatgcactt
ctgcgggatctgcatcgcgagattctcgataaggttgcacaacaagtcatggagacgttc
gaggcccgcatgcgtgaaaagctcgcccgtcaacgactcgaatccggtggcgacaaagca
gccaaacctccgcgaatgggatccgtttcgctggacgtactacccgagctggcgatgagg
cagcgttcgcgacgttcgccggggtcccagccaggagcaccccccgacccgcagtcagca
gtcgagaagggagcgagtgcctcatctgcggtggcagaactggcccgtttatcatcgcga
tcttcactcgatcgcgctgcacacgactcgctctcagtatcgctcttggaagatgtggcg
cccgacgaggaccaggtgtacctgcaaagagttttagagtgctgcttccaaccgacggac
gatgtgccgcctcagctgagcgcttcgatcgtcagtaccctggaccaagacaaaagcgat
atcgctacgcgctaccgcgagcactggagcccgtatctggaaaccttgttcgatacgcat
ggaatatgtatcaagcagaagctgcaggaaccagagccgccagcaaactccaccggctgc
gcgcgaactgaaggctatgcggcgttttcgcgtgagctcaaggcattccgttggcgtccg
ccgaaacaagtcattattccggcggatgaggcccggcgctggagtgccaccggcagcctg
cgtggtacccgcgtcgagcaacgccagctcctctctgcggtcagtgatcgtgaacagacc
gtactctatctgcaacagcgcgaacgattcctgcgcttctaccgctctgggattcatggc
tacggcttgtgggcgctcgaggacatccccgccggtgactacatcattgaataccgcggg
gagctggtacgctctgctgtggccgacctacgcgaacgtgcttaccgccagcagggcatg
ggcgactcgttcatgtttcgtatcgacgcggataccgttgttgatgcaacccacattgga
agcgttgcccgtttcgtgaaccacagctgcgatccgaacgcgatcgcccgaatcgtgcaa
ctcggtggtgcatcccatattctgttttacagcaagcgttcgatctgtgtgggcgaggag
attacctacgactacaattttgatattgaggatgatgcctccgagaaggtaccatgtttg
tgtggagcacccaattgccgtcagtatttgaactga
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