Chenggangzhangella methanolivorans: K6K41_16895
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Entry
K6K41_16895 CDS
T07462
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cmet
Chenggangzhangella methanolivorans
Pathway
cmet03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cmet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K6K41_16895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmet03400
]
K6K41_16895
Enzymes [BR:
cmet01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
K6K41_16895
DNA repair and recombination proteins [BR:
cmet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K6K41_16895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
QZN98681
UniProt:
A0A9E6UK07
LinkDB
All DBs
Position
complement(3390194..3391636)
Genome browser
AA seq
480 aa
AA seq
DB search
MSGRRIVLAEPDDVAGWRRAARGLLAEGAPPFTVDWRVGEDDRDLFGTDDAPSPQVAGAP
APSVPRSFLELAETGLLHSDPGRFDLFYRLLTRVAADRRLMEDAADPDLTRARALVKAVR
RDKHKMTAFVRFREISGEDGAPQFVAWFEPEHHIVAATAPFFMRRFSAMRWSILTPRRSA
HWNGTRLEIAEGANRADAPEGDALEALWRTYYASIFNPARLKVSAMRAEMPKKYWRNLPE
APLIGPLIAQAQRRSDEMVAAPAAEPKKGQRLMSPPPAAPERDPTPLSALREMVEGCRAC
PLWGPATQSVFGEGPEGAQVVVVGEQPGDKEDIAGRPFVGPAGALFDRAAEAAGVEREKL
YVTNAVKHFKFEPRGKFRLHKSPAPGEIAACRGWLERELGAIRPRLVVAMGASAARAVIG
RAVKVGDARGAIMEREGAPDVLVTVHPSYLLRLPDEARKQEEFDRFVADLRLALPFLQAA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgggcggcggatcgtgctcgccgagcccgacgacgtcgccggctggcggcgcgcg
gcgcgcgggctgctcgccgagggcgcgccgccgttcacggtcgactggcgcgtcggcgag
gacgaccgcgacctgttcgggaccgacgacgcgccctccccgcaggtcgcgggcgcgccg
gcgccgagcgtgccgcgcagcttcctcgagctcgccgaaaccggtctgcttcattccgat
cccggccgtttcgacctgttctaccgcctgctgacgcgggtcgcggccgaccgccggctg
atggaggacgccgccgacccggacctgacgcgcgcccgcgcgctcgtgaaggcggtgcgg
cgcgacaagcacaagatgaccgccttcgtgcgcttccgcgagatatcgggcgaggacggc
gcgccgcagttcgtcgcctggttcgagcccgagcatcacatcgtggcggcgaccgcgccc
ttcttcatgcggcgcttttcggcgatgcgctggtcgatcctcacaccgcggcgctcggcg
cattggaacgggacgcggctcgagatcgccgagggcgcgaaccgcgccgacgcgcccgaa
ggcgacgcgctcgaggcgctgtggcggacctattacgcctcgatcttcaacccggcgcgc
ctcaaggtctcggcgatgcgggccgagatgccgaagaagtactggcgcaaccttcccgag
gccccgctcatcggtcctctgatcgcgcaggcccagcggcgctccgacgagatggtcgcg
gcgcccgcggccgagccgaagaagggccagagattgatgtcgcccccgcccgccgccccg
gagcgcgatccgacgccgctttcggcgctgcgcgagatggtcgagggctgccgcgcctgc
ccgctatgggggccggcgacgcaatccgtgttcggagaggggccggagggcgcgcaggtg
gtggtcgtcggcgagcagcccggcgacaaggaggacatcgccggccgccccttcgtcggg
cccgcgggcgcgctgttcgaccgggccgcggaggccgcgggcgtggagcgcgagaagctc
tacgtcaccaatgcggtgaagcacttcaagttcgagccgcgcggaaagtttcggctgcac
aagtcgcccgcgcccggcgagatcgccgcctgccgcggctggctcgagcgcgagctcggc
gccatccgcccgcgcctcgtggtggcgatgggcgcgagcgcggcgcgcgcggtcatcggg
cgcgccgtgaaggtcggcgacgcccggggcgcgatcatggagcgcgagggcgcgcccgac
gtgctggtgacggtccacccgtcctacctgctgcgcctgccggacgaagcgcgcaaacag
gaggagttcgaccgcttcgtcgccgatcttcgtctcgccctcccgttcctgcaggccgcg
tga
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