Clavibacter michiganensis subsp. michiganensis: CMM_0263
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Entry
CMM_0263 CDS
T00529
Symbol
ddlA
Name
(GenBank) putative D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
cmi
Clavibacter michiganensis subsp. michiganensis
Pathway
cmi00470
D-Amino acid metabolism
cmi00550
Peptidoglycan biosynthesis
cmi01100
Metabolic pathways
cmi01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
cmi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CMM_0263 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CMM_0263 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CMM_0263 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cmi01011
]
CMM_0263 (ddlA)
Enzymes [BR:
cmi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
CMM_0263 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
cmi01011
]
Precursor biosynthesis
Amino acid ligase
CMM_0263 (ddlA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATPgrasp_YheCD
GARS_A
Motif
Other DBs
NCBI-ProteinID:
CAN00285
UniProt:
A5CMJ9
LinkDB
All DBs
Position
complement(324294..325301)
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AA seq
335 aa
AA seq
DB search
MRISVLFGGESEERDVSIASAAQVVPALRALGHEVVAVDTARGALDAAAEARILTPDVGV
RPPTSAELATAAAGGSAAVLRLPADLRDGDLVFLALHGGSGEDGRLQALLELAGIPFTGS
GSLGSALAMDKDVAKTLLRAGGVRTPDWIIDPEPDAVEPALGFPVVVKPTGQGSTVGLSV
VRAAEELPAALELARRHGTVMVERFVRGRELTVGVLDGEALAVGEIGVPVDEAFTYAAKY
QAGAIAETFPADLPSEVAEEARAAALAAHRILRLAGYSRSDFRLDDAGALWIIEANSLPG
LTATSLLPQSAAAVGIGYPELCDRIARIALRGRAG
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcggatctctgtgctcttcggcggcgagagcgaggagcgcgacgtctccatcgcgagc
gcggcgcaggtcgtcccggccctccgggcgctcgggcacgaggtggtcgcggtcgacacc
gcgcggggcgcgctggacgccgccgccgaggcgcggatcctcacccccgacgtcggcgtg
cgcccgccgacgtccgcggagctggccaccgcggccgcgggcggatccgccgcggtgctg
cgcctgccggccgacctccgcgacggcgacctggtcttcctcgcgctgcacggcggatcc
ggcgaggacggccgcctgcaggcgctcctcgagctcgcgggcatcccgttcacgggatcc
ggctccctcggcagcgcgctcgcgatggacaaggacgtcgccaagacgctgctgcgcgcc
ggcggcgtgcggacgcccgactggatcatcgaccccgagccggatgcggtcgagcccgcc
ctcggtttcccggtggtcgtgaagccgaccgggcagggatccaccgtcgggctctccgtg
gtgcgcgccgccgaggagctgcccgccgcgctcgagctggcgcggcggcacggcaccgtg
atggtcgagcggttcgtgcgcggccgcgagctgacggtcggcgtgctcgacggcgaggcg
ctcgcggtgggcgagatcggcgtgcccgtggacgaggcgttcacctacgccgcgaagtac
caggcgggcgcgatcgcggagacgttcccggccgacctgccgagcgaggtggcggaggag
gcgcgggcggcggcgctggccgcccaccggatcctccggctcgccgggtacagccgctcc
gacttccggctcgacgacgcgggcgccctctggatcatcgaggccaacagcctgcccggc
ctcaccgcgacgagcctcctgccgcagtcggcggcggccgtcggcatcgggtacccggag
ctgtgcgaccggatcgcgcggatcgcgttgcgggggcgcgcgggctga
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