Callorhinchus milii (elephant shark): 103172030
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Entry
103172030 CDS
T03088
Name
(RefSeq) thyroid hormone receptor alpha isoform X1
KO
K05547
thyroid hormone receptor alpha
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
103172030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmk03000
]
103172030
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cmk03310
]
103172030
Transcription factors [BR:
cmk03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
103172030
Nuclear receptors [BR:
cmk03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
103172030
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
103172030
NCBI-ProteinID:
XP_042199345
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All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MDEGVQVGMECVACQTEGMGVCLFTGYIPSYLEKDEPCVVCGDKATGYHYRCITCEGCKG
FFRRTIQKNLHPTYCCKYMESCLIDKITRNQCQLCRFRKCTAVGMAMDLVLDDGKRIAKR
KLIEENREKRRREEVVKNLQNKPEPTPEEWELIRVVTEAHMATNAQGSHWRQKRKFLPED
IGQSSLVTTPEGDKVDLEAFSQFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCC
MEIMSLRAAVRYDAESETLTLNGEMAVKREQLKNGGLGVVSDAIFELGKSLSAFNLDDTE
VALLQAVLLMSSDRTGLTWIEKIEKCQEAYLLAFEHYINYRKHTIPHFWPKLLMKVTDLR
MIGACHASRFLHMKVECPTELFPPLFLEVFEDQEV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgagggtgtgcaggttggaatggagtgtgtggcatgtcagactgaggggatgggt
gtgtgcttgtttacaggctacatccccagctacctggagaaggacgaaccttgtgttgtt
tgcggtgacaaagccacaggatatcactacaggtgcatcacctgtgagggctgcaagggt
tttttcaggagaacgatccagaagaaccttcacccgacttattgctgtaaatacatggag
tcgtgtctgatcgacaaaatcacccggaaccagtgccagctttgccgcttcaggaagtgc
acggctgtggggatggccatggaccttgtcctggacgacggcaaacgcatcgcaaagagg
aagctgattgaggaaaatcgcgaaaagcgcagacgagaggaggtggtcaagaacctacag
aacaaaccagagcccacacccgaggaatgggaactgatccgcgtggtcaccgaggctcac
atggcaaccaacgcacagggcagccactggcgccagaaacggaaattcctgccagaagat
attgggcaatcatcgctagtcaccacaccagaaggagacaaagtggatctggaagccttc
agccagttcactaagattatcaccccggccatcacaagagtcgtggactttgccaaaaaa
ctgcccatgttttctgagctgccttgtgaagaccaaatcatcctgttgaagggctgctgt
atggagatcatgtctctgagagctgctgttcgctatgatgcagagagcgagaccttaaca
ctaaatggagaaatggctgtgaagagagaacagctgaagaatggaggtctcggtgtggtg
tcagatgctatatttgaactggggaagtctttatcagcctttaatctggatgacacagaa
gtagccttgctccaggctgttttactgatgtcctcagatcgaacaggactaacttggata
gaaaaaatagagaaatgccaagaggcctacctcctggcattcgaacactacataaactac
cgcaaacacaccatcccacacttctggccaaagctgctgatgaaggtgacagacctgcga
atgatcggtgcttgccatgccagccgctttctgcacatgaaggtggagtgtcccacagag
ctgttccctcccctgttcctggaggttttcgaggatcaggaagtgtaa
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