KEGG   Callorhinchus milii (elephant shark): 103172893
Entry
103172893         CDS       T03088                                 
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
  KO
K12590  exosome complex component RRP46
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103172893 (exosc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmk03019]
    103172893 (exosc5)
Messenger RNA biogenesis [BR:cmk03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     103172893 (exosc5)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 103172893
NCBI-ProteinID: XP_042201351
LinkDB
Position
Unknown
AA seq 221 aa
MEAPSVELPLLRPFGCEYSLLSRPDGSACFTQGDTTVLAAVYGPAEVKVSKEIFDKATLE
VLLKPKVGLPGVAERSKEQLIRNTCEATILTALHPRSSITVVLQVIHDAGSLLSCCLNAA
CTALIDAGLPMRSLFCGITCLIDSDGNILLDPTSKQEKEYRAVLTFSMDSVDKKVLLSST
KGSYSVEELQQCIATCQKGSEKVFQFYRDSVRRKYSKLLNE
NT seq 666 nt   +upstreamnt  +downstreamnt
atggaggcgccgagtgtggagctgccgctcctcaggccgttcggctgtgagtacagtctg
ctgtccaggcctgacggctcggcctgcttcacacaaggggacaccacggtgttggccgcc
gtgtacggacctgccgaggtgaaagtcagcaaagagatctttgacaaagccacactggag
gtcctgctcaaacctaaagtggggttgccaggggtcgcggagaggagcaaggagcagctg
attcgaaacacgtgcgaagccacgatcctgacagctctgcacccccgctcctccatcacc
gtcgtcctgcaggtcattcacgacgcggggtccctgctctcctgctgcctgaatgcggcc
tgcacagcgctgattgacgcggggctgccgatgaggagcttgttctgcggcataacctgc
ctaattgactccgacgggaacatccttctggacccaacaagcaaacaggaaaaggagtac
agagctgttctcacgttctccatggacagcgttgacaagaaagtgctgttatcttccacc
aaaggctcttactccgtagaggagctccagcagtgcatcgcaacatgccagaaagggtcg
gaaaaagtctttcagttttaccgggattcggtgcggaggaagtactctaagctcctgaac
gagtga

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