Callorhinchus milii (elephant shark): 103172893
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Entry
103172893 CDS
T03088
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103172893 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmk03019
]
103172893 (exosc5)
Messenger RNA biogenesis [BR:
cmk03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
103172893 (exosc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
103172893
NCBI-ProteinID:
XP_042201351
LinkDB
All DBs
Position
Unknown
AA seq
221 aa
AA seq
DB search
MEAPSVELPLLRPFGCEYSLLSRPDGSACFTQGDTTVLAAVYGPAEVKVSKEIFDKATLE
VLLKPKVGLPGVAERSKEQLIRNTCEATILTALHPRSSITVVLQVIHDAGSLLSCCLNAA
CTALIDAGLPMRSLFCGITCLIDSDGNILLDPTSKQEKEYRAVLTFSMDSVDKKVLLSST
KGSYSVEELQQCIATCQKGSEKVFQFYRDSVRRKYSKLLNE
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgccgagtgtggagctgccgctcctcaggccgttcggctgtgagtacagtctg
ctgtccaggcctgacggctcggcctgcttcacacaaggggacaccacggtgttggccgcc
gtgtacggacctgccgaggtgaaagtcagcaaagagatctttgacaaagccacactggag
gtcctgctcaaacctaaagtggggttgccaggggtcgcggagaggagcaaggagcagctg
attcgaaacacgtgcgaagccacgatcctgacagctctgcacccccgctcctccatcacc
gtcgtcctgcaggtcattcacgacgcggggtccctgctctcctgctgcctgaatgcggcc
tgcacagcgctgattgacgcggggctgccgatgaggagcttgttctgcggcataacctgc
ctaattgactccgacgggaacatccttctggacccaacaagcaaacaggaaaaggagtac
agagctgttctcacgttctccatggacagcgttgacaagaaagtgctgttatcttccacc
aaaggctcttactccgtagaggagctccagcagtgcatcgcaacatgccagaaagggtcg
gaaaaagtctttcagttttaccgggattcggtgcggaggaagtactctaagctcctgaac
gagtga
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integrated database retrieval system