Callorhinchus milii (elephant shark): 103174795
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Entry
103174795 CDS
T03088
Symbol
hfm1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmk03036
]
103174795 (hfm1)
Enzymes [BR:
cmk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
103174795 (hfm1)
Chromosome and associated proteins [BR:
cmk03036
]
Eukaryotic type
Meiosis-specific proteins
Others
103174795 (hfm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
ResIII
Helicase_C
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
103174795
NCBI-ProteinID:
XP_007885537
LinkDB
All DBs
Position
Unknown
AA seq
1428 aa
AA seq
DB search
MSWKIAPAPPITEIPATQELQKELEILSSSGINQSSKKFFPPFKKDENMCQSQTAVESKY
TYIPVKRKTFELGISNSLKSQSEFNFRNANSDNSTSFLNDCKGHSRQQQKHIVHLYDNLN
CPNISHNSEEKDKSPNSFRKSLFKKPLAGTDCSSSFEKSVLCSEINGFRNFAVKENVYGV
MDSTNRRNQSESCVKKARVLPMVPQSLNLKDATGKNSGTLRPVTEISVQFRSVFKEFPYF
NYIQSKALDDLLYTDRNFVICSPTGSGKTVIFELAIIRLLMEVPKPWSNIKIVYMAPIKA
LCSQRHDDWKAKFGPIGLNCKELTGDTEMDEYFEILDAHIIMTTPEKWDIMTRKWRDNSL
VQLVRLFLIDEIHVVKDECRGATLEVVVSRMKTCQSATLRVSRQSDIDATLRFVAVSATI
PNIEDIAEWLSDRKGPAVFMKMDESYRPVKLRKVVLGFPFSNAQSEFRFDLSLNYKTASI
IQTYSEQKPTLVFCATRKGVQQAASILAKDAKFVMSIEHKQRLQKYSNSIKESKLRDLLL
YGVGYHHAGVDLSDRKCTEAAFTAGDLPVLFTTSTLAMGVNLPAHLVVIKSTMHYAAGMF
QEYSETDILQMIGRAGRPQFDTTATAVIMTRNQTKDLYTQMISGAQTIESSLHKHLVEHL
NAEIVLHTITDVSVALEWIRSTFLYIRALKNPNHYDFATGINRAGIEAKLQELCLKNLHA
LSSIGLIKMDEEINFKPTEIGKLMARYCIAFDTMKLFQMFTGNETLAEMVTLISKCKEFT
DVQLRVNEKKTLNTLNKDKNRTTIRFPMEGKIRTNEMKVNCLIQAQLGCISIQDFALTQD
TGKIFRNGLRVTKCLSEVLEQQEKCFSILLNALILNKCFRAKLWENSTYASRQLEKIGAT
MSSAMVHAGLTTFQKIEDTNARELELIVNRHPPFGNQIKEAIIHLPKYELNVEQIARYHA
SVSEILVTVNLTNYEQLQKRRTAPDNHFTSLIIGDADNKVVFKQKITDSLLLKSGKYTKK
IEVRRAHKGEELSIKLISSDYVGLDIQQTYIAFYSGPKRFGTHHIYEKHDIERTQSAKQK
HTATPTTRPSVNETKGLSRESTCPEPVKRLCNHFCKNKDTCGHECCKFGVTVAPSSATRT
TKMISYLSDLKSRNETFSAPLVKRLKMQTFNEAQDINLQQFAYTQKTPLSTLPRTKPSPP
AKACKRNQFDIKAHQQEEYNQALSQHNSSVIPWCQDTHDSFNCNSTDANESGYWSTEGTN
VNFELGDDVWDDFDDEKLLRASSFVGEEETSFKSETGSLNEKYQVLTEFNILPKGSLDIF
QTQMINNKSKGDIHLPRMEQQCLNSRLPLNSSVKETPTFLETIDHTRRVNSSEEVSTSTS
SHLKSLNVTKGNGPLNCFYQYNTNTETGSRCHSEEECNAFIGIFDGIF
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atgagttggaagattgccccagctccaccaattactgaaataccagctactcaggaactg
cagaaagagctagaaatattgagctcttcaggtatcaatcagtcatcaaagaaatttttt
ccacctttcaagaaagatgaaaatatgtgtcagtcacaaacagctgttgaatccaaatat
acatatatcccagtcaaacgcaaaacatttgaattagggataagcaactctttaaaaagt
caatctgagtttaatttcagaaatgctaattctgataattcaaccagttttttaaatgac
tgcaaaggtcatagcagacaacagcaaaagcacattgtacatttatatgataatttgaat
tgtccaaatatatcacataactctgaggaaaaagataaaagtccaaactcgttcagaaaa
agcttatttaaaaaaccactagcaggaactgactgctcttcctcgtttgagaagtcagtg
ttgtgcagtgaaataaatggctttagaaattttgctgtgaaagaaaacgtatatggtgtg
atggacagtaccaaccgcagaaatcagagcgagtcttgtgtgaaaaaagcacgtgtgctt
cctatggtaccacaatcacttaacctgaaagatgcaacaggaaagaattcaggaacattg
agaccagttactgaaatttctgttcaattcagaagcgttttcaaagaatttccttatttc
aactatatacagtccaaagcactggatgatcttctgtatacagacaggaattttgtgatt
tgttccccaactggatctggaaagactgtgatatttgagctagccattatcagattactg
atggaagttccaaagccatggtccaatataaaaattgtgtacatggctccaatcaaggcc
ttatgcagtcagcggcatgatgactggaaagcaaagtttggacctataggactgaattgt
aaagagctcactggagacacagagatggatgagtacttcgagattttggatgcacacatt
atcatgactactccagaaaaatgggatataatgacaagaaaatggagagataattcgtta
gtccagctcgttcggcttttcctcattgatgagatacatgttgtgaaagatgaatgccgt
ggtgcaacccttgaagttgtagttagcagaatgaaaacatgtcagtcagctaccttgcgt
gtatcacgccaatccgatattgatgccacattgagatttgtagcagtatccgcaacaatt
cctaatattgaagatatagcagaatggctatcagatagaaaaggacccgctgttttcatg
aagatggatgaaagctatcgtccagtaaaactacgcaaagttgttcttggatttcctttc
tccaatgctcaaagtgaattcagatttgacttgtctcttaattacaaaacagctagtatt
atacaaacatactccgaacagaaacctacattggtgttctgtgctacaagaaaaggtgtg
caacaggctgcatctatacttgcaaaagatgccaaatttgtcatgagtatagaacataaa
caaagattgcaaaaatattcaaactcaatcaaagagtccaaacttagagatttgttactg
tatggagtgggttatcatcatgctggtgtcgatctgtctgacagaaaatgcactgaagct
gccttcactgcaggagacttaccagtactttttactactagcaccttagctatgggagtc
aacttgccagcacacttagtagtcattaaatccacaatgcattatgcagcaggaatgttt
caggaatacagtgaaactgatatactacaaatgattggacgagctggacgacctcagttt
gatacaacagccacagcagttatcatgacacggaaccagacaaaggacttgtacactcag
atgataagtggagcacaaaccatagagagcagtttgcacaagcatcttgtggaacatttg
aatgcagaaatagtgctgcacacaattaccgacgtcagtgtagctttggagtggatacga
tccacatttctttacataagagctctcaaaaacccaaatcactatgattttgctactgga
atcaatagagctggaattgaagcaaaattgcaagaattgtgcctgaagaatttgcatgca
ttgtcttccattggtttgataaagatggatgaagaaatcaatttcaagcctacagaaatt
ggaaagttgatggcgcgatattgtattgcttttgatacaatgaagctttttcaaatgttc
actggaaatgaaaccttagctgaaatggtcacactgatttctaaatgcaaggaatttaca
gatgttcagctgagagtcaatgaaaaaaagactcttaatacactaaacaaagacaagaac
cgaactaccattaggtttccaatggaagggaagattcgaacaaatgaaatgaaagtgaat
tgtctaattcaggcccaattaggatgcatttcaatacaagattttgcattaactcaagac
acaggcaagatattcagaaatggtctgagagtcaccaaatgtctatctgaagtgcttgaa
caacaagaaaaatgcttttcaatattgttgaatgcgctgattctaaataaatgttttaga
gctaaactttgggagaactctacatatgcgtccagacaacttgaaaaaattggtgctact
atgtcaagtgccatggttcatgcaggacttactacattccaaaagatagaagatacaaat
gcaagagaactagagctgattgtgaacagacaccctccttttggaaaccagataaaagaa
gcgattattcatctcccaaagtatgaactcaatgtggaacagatcgcaagataccatgct
tctgtgtcagaaatcctagttacagtcaatttaacaaattatgaacaacttcagaaaagg
agaacagcacctgacaatcacttcacttcattaatcataggagatgcagacaataaagtt
gttttcaaacagaaaatcacggattcgcttttgctgaaatcaggaaaatatacaaagaag
attgaagtaagaagagcccataaaggagaagaactaagcattaagcttatcagctctgac
tatgttggtcttgacattcagcagacatatatagccttttactcaggaccaaaaaggttt
ggaactcaccatatttatgaaaaacatgatatagaacgtacacaatcagcaaaacaaaag
cacacagcaactccaacaacaaggccctctgttaatgagactaaaggattatccagagaa
agtacctgtccagaacctgtaaaacgactgtgtaatcatttttgcaagaataaagataca
tgtggtcatgagtgttgtaaatttggtgtgacagttgcacccagttctgctacccgtaca
acaaaaatgatctcttacctcagtgatcttaaaagcagaaatgaaactttctcagctcca
ttagtcaaacgattaaagatgcagacgttcaatgaagcacaagatataaaccttcaacaa
tttgcatacacacaaaaaactccattgtcaacattacctaggacaaaacctagtccaccg
gctaaagcatgcaagaggaatcaatttgacatcaaagctcaccaacaggaagaatataac
caagctttatcccaacacaattcatctgtcattccatggtgtcaagatacacatgattct
ttcaactgcaactcaactgatgcaaatgagagtggctattggtcgactgaagggacgaat
gtgaattttgaactaggagatgatgtgtgggatgattttgacgatgaaaagcttctacgt
gctagcagttttgttggtgaagaggaaaccagttttaaatctgaaacaggttctttaaat
gagaaatatcaagtcttaacagagttcaacatattgcctaaaggttctttagatattttt
cagacccaaatgattaataacaaatccaaaggtgatatacatctaccaagaatggaacaa
caatgcttgaattctagattacctttaaactcatcagttaaagaaacacccactttcctt
gaaactattgatcacacaagacgtgtgaacagctcagaagaagtatcgacttctacatcc
agccacctaaagtcattgaatgttaccaaaggcaatggaccattaaattgtttctaccag
tataataccaacactgaaacaggatccagatgtcattcagaagaagaatgtaacgctttc
attggcatttttgatggcatattttag
DBGET
integrated database retrieval system
