Callorhinchus milii (elephant shark): 103178096
Help
Entry
103178096 CDS
T03088
Symbol
smarca2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103178096 (smarca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmk03021
]
103178096 (smarca2)
03036 Chromosome and associated proteins [BR:
cmk03036
]
103178096 (smarca2)
Transcription machinery [BR:
cmk03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103178096 (smarca2)
Chromosome and associated proteins [BR:
cmk03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
103178096 (smarca2)
Chromatin remodeling factors
BAF complex
103178096 (smarca2)
PBAF complex
103178096 (smarca2)
GBAF(ncBAF) complex
103178096 (smarca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
103178096
NCBI-ProteinID:
XP_042201380
LinkDB
All DBs
Position
Unknown
AA seq
1575 aa
AA seq
DB search
MSTPTDSSGGMPHPGPSPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPSNVTHAMTPQG
QSDYQQDSMHQMHKPMDAMHDKGMAEEMHYGQMKGMGMRPAHAGMGPPQSPMDQHSQGYM
SPHPSPMSVPEHVPSPLSAGGPTPPQIPPTQTVPMMQGDPQAMPQQNRGTSPFNPVQLHQ
LRAQILAYKMLARGQPLPDNLQLAVQGKRSLPSMPQQAAPVAYNRPPSMGMHSMAGQSAG
PSQGMPGHVPKPWTEGQANEMGVPNTPQKMPPQAMCGRPSPAPAVQSAVSGPGASLPQQP
VVQPSPAIQLQQKQNRITPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPD
LRNKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNVKAYKRSKRQSLREARITEK
LEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLSRAIGTWHANTEREQ
KKETERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVASLTKLVYEHKAAQ
AAKEKKKKKKKKRQKTEEPGEGMSSSLGPDGELLDESSQMSDLPVKVIHAETGKVLQGPE
APKAAQLDTWLEMNPGYEVAPRSDSEASGSEYEEEEEDEEALLAPGTEKKIIGPNIEDVS
DFFAKQIIECAKQDVDDEYSMRAGMKGSQSYYAVAHAVTERIEKQSSLLINGMLKQYQLQ
GLEWLVSLYNNNLNGILADEMGLGKTIQTIGLIAYLMEHKRLNGPYLIIVPLSTLSNWVY
EFDKWAPSVVKISYKGTPALRRSFVPTLRNGKFNVLLTTYEYIIKDKHVLAKLRWKYMIV
DEGHRMKNHHCKLTQVLNTHYVAPRRVLLTGTPLQNKLPELWALLNFLLPTIFKSCNTFE
QWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDM
SSLQKVLYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPFMFQHIEESFA
EHLGYSGGIITGPDLYRASGKFELLDRILPKLRVTGHRVLLFCQMTSLMTIMEDYFAYRS
FLYLRLDGTTKAEDRGALLKMFNEPGSKYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNP
HQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSS
HERRAFLQALLEHEEQNEGDTISSSCSATWEEDEVPDDETLNQMIARHEEEFELFMRMDL
ERRREDARNPKRKPRLMEEDDLPSWIIKDDAEVERLTCEEEEEKMFGRGSRMRRDVDYSD
ALTEKQWLRAIEDGNLEEMEEEIRQKKARKRRRNVDKDSSKDEGKKKKKRGRPPAEKLSP
NPPKVTKQMSVIIDTVINYRDGMGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERI
RNHKYRSLGDLEKDVNLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEES
NDDDDDDEDEESGSETKSVRVKIKLGRKDSDRSREKGKSKKRLSRAKIKPVVSDDDSDDD
QEDNDQSDGSGSDDE
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactcctacagattcctctggtgggatgcctcaccctggaccatctccaggacca
tctcctggacccattctaggcccgagcccaggaccaggcccctcaccaggttcagtacac
agtatgatgggtccgagtcctgggccttcaaatgtaacgcatgcaatgacacctcagggc
caaagtgactaccagcaggacagcatgcaccagatgcacaagcctatggatgcaatgcat
gacaagggcatggctgaagaaatgcattacggtcagatgaaaggcatgggcatgaggcct
gctcatgctggaatgggcccacctcagagtcctatggaccagcattctcaaggatatatg
tctcctcatccatctccgatgagtgtaccagaacatgtgcctagtccgctttcagcgggt
ggccccactcctcctcagattccaccaactcagactgttccgatgatgcaaggagaccct
caagctatgcctcagcagaacagaggcacttcacccttcaatccagttcagcttcaccaa
ctgagagctcagattctagcatacaaaatgcttgcaagaggtcaacctttgcctgataac
ctacagcttgctgttcagggaaagcggtcactacccagtatgccacaacaggcagcccca
gttgcctacaacagaccacccagtatgggcatgcactcaatggctgggcagtctgcagga
ccttcacaaggaatgccaggacatgttcctaagccctggacagaagggcaagctaatgag
atgggtgttcctaatactcctcaaaagatgccacctcaggctatgtgtggaagaccttct
cctgcaccagctgtgcaatcagctgtgtctggccctggagcttcacttccacaacagcca
gttgtccagccttcacctgctatacaacttcaacagaagcaaaatcgtataacgccaatc
cagaaaccacagggcttggatcctgttgaaattcttcaggaacgtgaatacaggcttcag
gctcgaattgctcatcgaattcaagaacttgaaaacctacctggatctttgccaccggat
ttgcgcaataaagctactgttgaattgaaggctcttcgtctactgaacttccagcggcag
ttgaggcaagaggtggtagcctgcatgcgccgtgacacgactctggaaacggcacttaat
gtaaaggcatacaaacgcagcaagcgccagtcactgcgggaggctcgtatcacagaaaag
ctggagaagcagcaaaagatcgaacaagagcgtaagcgcaggcagaaacatcaggaatat
ctcaacagcattctgcaacatgcaaaggacttcaaagagtatcaccgttcagttactgga
aaaatacaaaagctctccagagccattggcacttggcatgccaacactgaacgtgagcag
aagaaagaaactgagaggattgagaaagaaagaatgaggaggctgatggcagaagatgaa
gaaggctaccgcaagctgattgatcagaaaaaggataagcgtctggcatacctacttcaa
caaactgacgagtatgttgcaagcctcacgaaactggtctacgagcacaaggctgcccag
gcagctaaagagaagaaaaagaagaagaagaaaaagaggcagaaaactgaggaacctgga
gaaggaatgagctccagccttggtcctgatggagagcttttggatgaaagtagtcagatg
agtgatttgccagtcaaggttattcacgctgaaactggtaaagttctccagggtccagag
gctccgaaagctgcccaattggatacctggcttgaaatgaatccagggtacgaagtagcc
cctcgatcagacagtgaggcgagtgggtcagaatatgaagaggaagaggaggatgaagaa
gccctacttgcgcctggcactgaaaaaaagatcattggcccgaacattgaagacgtatca
gactttttcgccaaacagataattgaatgtgctaaacaagatgttgacgatgaatatagc
atgagagcagggatgaagggttcccagtcatattatgcagtggctcacgcagtgactgag
cggatagagaaacaatccagtctccttatcaatggaatgctgaagcagtatcagcttcaa
ggactggaatggctggtttctctgtacaacaacaatctgaatggcattctggcagatgaa
atgggcctgggaaagactatccagactataggactaatcgcttacctgatggagcacaag
agacttaacggaccttatctcatcattgtacctctctcaactttgtccaactgggtttat
gaatttgataagtgggcaccatcagttgtgaagatttcgtacaagggaactccagctctg
cgacggtcatttgttccaacgctacgcaatggaaaattcaatgttcttctaaccacatat
gaatacatcattaaggataaacatgtccttgccaagcttcgatggaaatacatgatcgta
gatgagggtcatcgtatgaagaatcaccactgcaagctgacgcaggtgttgaacacacat
tatgttgcacctcgtagggttctcttgactggaactccattgcagaacaaactgccagaa
ctctgggcccttctaaactttctgctgccgaccatctttaaaagctgcaacacctttgaa
caatggttcaatgctccatttgccatgactggagaaagggtagacttgaatgaggaggaa
actatcctcattatcagacgtctccacaaagtgctgcgtccttttctactgaggaggctg
aaaaaagaagtggaatcccaattaccagaaaaggttgaatatgtcatcaaatgtgacatg
tcttctctacagaaggttctgtatcgtcacatgcaagctaagggaattcttctaactgac
ggttctgagaaggataaaaagggtaaaggtggtgctaagaccctcatgaataccataatg
cagctgagaaagatatgcaatcatcccttcatgttccagcacatagaggaatcatttgct
gaacatttgggttacagtggaggaatcatcactggtcctgacctttatcgagcttcagga
aagtttgagctattggatcgtattttaccaaaactacgagttacgggtcacagagtactg
ctgttctgccagatgacttcgctgatgaccatcatggaagactattttgcttacaggagc
ttcctgtacttgcgcctcgatggtacaactaaggcagaggaccgtggtgctttgctaaag
atgttcaacgagccaggctcaaagtatttcattttcttgttgagtacccgagctggtggc
ctgggcctgaacctccaggctgcggatacggtcgttatctttgacagtgactggaaccca
caccaggatttgcaagcccaagatcgagctcatcgtattggacagcaaaatgaagtccgt
gttctgcgcctttgcactgttaacagtgtagaggagaagatcctggctgctgccaaatac
aaactgaacgtggatcagaaagttatccaggccggtatgtttgatcaaaaatcttcaagc
catgagcgtcgagctttcctgcaggctttgctggaacatgaggagcagaatgagggggac
acgatttcgtcttcctgcagtgctacctgggaagaagatgaggttcctgacgatgagacc
ctgaatcaaatgattgcaaggcacgaagaggagtttgaattattcatgcgcatggatcta
gaacggcggagagaagacgcacgcaatcctaaacgcaagcctaggctgatggaagaggat
gacctgccatcctggatcatcaaggatgatgcagaagttgaacggttgacttgtgaggag
gaggaggagaagatgttcggacgaggttcacgtatgcgcagggacgtggactacagtgat
gctcttacagagaagcagtggctaagggcaattgaagatggtaatctagaagaaatggaa
gaggaaattcgccagaagaaagcacgcaaacgcagaagaaatgtagataaagattcatca
aaggatgaaggaaagaagaaaaagaagagaggcagacctccagccgaaaaactgtctcca
aacccaccaaaggtcacaaagcagatgtctgtaattatagatacagttataaactacaga
gatggtatgggtcgacagttgagcgaggttttcatccaactaccctctcgaaaagagctg
cctgaatactacgagcttatccgaaaacctgtggatttcaagaagataaaggaacgcatc
cgcaaccacaagtatcggagcctgggagacctggagaaagatgtcaatctgctgtgtcat
aatgctcagacattcaacttggaaggatcacagatttatgaagattccattgttcttcag
tcagtgttcaaaagtgccagacagaagatcgctaaagaagaggaaagtgaggaggaaagc
aatgatgatgacgatgatgatgaagatgaggagtcagggtctgaaacgaagtccgtcaga
gttaaaataaagcttggtcgaaaggacagtgacagaagtcgtgagaaagggaaaagcaag
aagcgtctaagtcgtgctaaaattaagccagtcgtgagcgatgatgatagcgatgacgac
caagaagataatgaccagtcagacggcagtggcagtgacgatgagtga
DBGET
integrated database retrieval system
