KEGG   Callorhinchus milii (elephant shark): 103184396
Entry
103184396         CDS       T03088                                 
Name
(RefSeq) LOW QUALITY PROTEIN: ataxin-2
  KO
K23625  ataxin 2/2L
Organism
cmk  Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmk03019]
    103184396
Messenger RNA biogenesis [BR:cmk03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     103184396
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 103184396
NCBI-ProteinID: XP_042193227
LinkDB
Position
Unknown
AA seq 1111 aa
MSMKQANSRKPGGGGGGGGGGGAGGRQSAGRGRSGGKGPPQSSIPYDGIYANMRMVHILT
SVVGAKCELKVRNGGIYEGVFKTYSPKCDLVLDAAHRKNTEFSSRDPGPKREDIVESIIF
KSADVVMLHFKDVDLNYARRVPSETDAFTDAAIGSRVNGEHKDKDLEPWDGGESTSEDLE
TLESDVSNGWDPNDMFRFNEETYGVRSTYDSSLSSYTVPLERDNSEEFLRREARAAQLAE
EIESSAQYKARVALENDERTEEEKYTAVQRTPGERERESHGVNSRENKYIPPGQRNRDWG
STRQHSPRIGQSGPPSSRAGSHTPDYSPNPGSDQRVVNGGVSWQPPCQSPSSRPPSRYPS
SPNSLPPRAATPTRPPSRPPSRPSRPSSHPSAHGSPVPVSTMPKRMSSEGPPRMSPKAQR
HPRHRGSSTRGGMSSGSEFVPHSVSGDISAPVPRNSPSGGTWSSVVSGGSSSRLSPKTHR
PRSPRHGNPPPQFNTGGASSGMILSSPQPGSGPSDPVTMPTTAVSPAPASPAPNRAVTPS
AEAKETRLQEQKQSSPSANKEGAKPIEASATSNFSKPGNKIAPPMALDHKKRIADLKKFR
DDFRLQTTPSPDPAVDQFLNKSREAGDNQPKDPIKEKMAVSEAVAKESASESSSNANTSS
ASSKPSSPSTSPNTVSAEQKRGPDVTSQAVQTTSPNSKPEKEEKEEKKEGTPEQVRKSTL
NPNAKEFNPKTFYTPPKPTTTPTPPRPQAQPSPSIVVQQHPPTVYNQTTMCFTPNMVYPV
PVSPGVQTTHMYHVPMTPMSINQAKPYRAVPNMPQQRPDQHHPQGTPTMMHPVSAAGQIV
STAPAYSQYLTYNPQQFTNQPLVQSVAHYHQSQPQMYSPVMQTNARMMAPPGHGQPGMVQ
SSTPQYATAEQTHTMYVSPGPIHQQYAPHPTATLHPHPSHPQPSATPTGQQQQQAQHAGS
HPAQSPVQHQHQHQAQALHLGNPQQQQAIYHTTLAPTPPSMAQGPNPQSPQTSFPSAQQA
VYTLHPQQVQHGYSNAPHMAHVQQAHVQSGMAPPGHHPAPTHPPMMLMQAQPPGGHQAGI
PQSALPPIPVSSATHFSYMAHPQVQAHHQQL
NT seq 3336 nt   +upstreamnt  +downstreamnt
atgtccatgaaacaagccaacagccgcaaacccggcggcggggggggaggaggaggcgga
ggaggagcgggggggagacagtccgccggcagagggcgcagtggtggaaaaggacctcca
cagtcttctatcccgtatgatggaatctatgcaaacatgcgtatggtccacattcttact
tcagttgtaggtgcaaaatgcgaactaaaagtgaggaatggaggaatatatgaaggcgtt
tttaaaacctacagtcccaagtgtgatttggtgcttgatgctgctcaccggaagaacact
gaattcagctcgcgtgaccctgggcccaagcgagaagacattgtggaaagcatcattttt
aaatctgcagatgtcgtaatgctgcattttaaagatgtcgatttaaattatgcacgaaga
gttccatctgaaacagatgctttcacggatgctgccatcggctctagagtaaacggtgag
cacaaagacaaagatctagaaccgtgggatggtggcgaaagcaccagtgaagatttggaa
accttggagtctgatgtgtctaatggttgggatcccaatgacatgttcagatttaatgag
gagacgtatggagtgagatcaacctatgacagcagcttgtcctcctatacagtacccctg
gaaagggataattctgaagaatttctaagacgggaggccagagcggctcaacttgctgag
gagattgaatccagtgcccagtataaggcaagagttgctttagaaaacgacgaaaggaca
gaggaagagaaatatactgcggttcagagaactcctggcgaaagagagagggagagtcat
ggtgtgaactccagagaaaataaatacattccaccaggccagaggaacagggattggggg
agcacacgtcagcattcaccaaggatcggacaatctggcccaccatcttcccgggctggg
tcacacaccccagattacagccctaatcctggaagcgaccaaagagttgttaacggaggt
gtttcctggcaaccgccttgccaatctccttcctcacgcccaccttctcgatacccgtca
agccccaactctcttccacctcgagcagccactcctaccaggcccccctccaggcccccc
tcacggccttcaaggccctcgtctcacccctctgctcacggttctccagttcctgtctct
actatgcctaagcgcatgtcttcagaaggtcctccacggatgtcgccaaaggcccagcgt
cacccccgacaccgcggttcctctacccggggagggatgtcctcgggctcggagtttgtc
cctcacagtgtgtctggagacatttctgcccccgttcctcgaaacagtccttcaggaggg
acatggtcgtctgttgttagtggaggatcaagttcccgtttgtctcccaagacacaccgg
ccccggtctccccggcacggcaacccgcctcctcagtttaacactggaggtgcttcgagt
gggatgatcctgtcttcccctcagcctggcagtggtccatccgatcctgtaaccatgccg
accactgcagtgtctcctgccccagccagccctgccccgaacagggctgtcaccccttca
gccgaggctaaagagaccagactccaggagcaaaagcagagctcgccttctgctaacaaa
gagggtgccaagcccattgaggcgtccgcaacatctaacttcagcaaaccaggaaataaa
attgcaccgccaatggctctggaccataaaaagcggattgcagacttgaagaaattcagg
gacgattttaggttgcagacgactccttctccagacccagcggtggatcagttcttaaac
aagtcccgagaagctggagataaccaacccaaagacccgatcaaggagaagatggcagtg
agtgaggcagttgccaaggagtctgccagtgagagcagctccaatgctaacaccagtagt
gccagcagcaagcccagcagccccagcacttctcccaatactgtcagcgccgagcagaag
agaggcccagatgtgacgtcccaggccgtgcaaaccacctccccaaacagtaaaccagag
aaagaggagaaggaagagaagaaggaagggaccccagaacaagttagaaaatctacattg
aatcccaacgctaaagagttcaaccccaaaaccttctacacgcctccaaaaccaacgacc
acccccaccccgcctcgcccgcaggcccagcccagcccatccattgtggtgcagcagcac
ccacccactgtgtacaaccagaccaccatgtgcttcactccgaacatggtctaccctgta
cctgtcagccccggagtgcagactacgcacatgtaccatgtccccatgactcccatgtca
atcaaccaagccaagccatatagagcagtaccaaacatgccacagcagcgaccagaccag
catcaccctcagggcactccaaccatgatgcacccagttagtgcggccggccagatcgtc
tcaactgctccagcttactcccagtatctcacttacaaccctcagcagtttactaaccag
cccttagttcagtctgtcgcacactatcatcagtctcagcctcagatgtacagcccagtg
atgcagactaatgctcgaatgatggcaccgcctggtcatgggcaacctgggatggtccag
tcctccacgccacaatatgctacagctgaacagacgcacaccatgtacgtctctcctggc
ccaatccatcagcagtacgcaccccatccaactgcaactctgcacccccatccttcgcac
ccacagccctctgcgaccccaaccggacaacagcagcagcaagcacagcatgccggcagc
cacccagcccaaagccctgtgcagcatcagcaccagcaccaagctcaagctcttcacctc
ggcaacccgcagcagcagcaagcgatctaccacaccacgctggcccccacccctccctcc
atggcacaaggtcccaacccccagtctcctcagaccagcttcccgtcagcccagcaagcc
gtctacacgctccacccccagcaggtgcagcacggatactccaacgcacctcacatggca
cacgtccagcaggcacacgttcagtctggaatggcccctcctgggcaccaccctgccccc
acccaccctcccatgatgttgatgcaggcccagccgccgggtgggcatcaagctggcatc
cctcagagtgccctgccgcccattccagtctcctcagctacacacttctcctacatggcc
cacccacaggtacaagcccatcaccagcagttatag

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