Callorhinchus milii (elephant shark): 103184908
Help
Entry
103184908 CDS
T03088
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmk03016
]
103184908 (cdkal1)
Enzymes [BR:
cmk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
103184908 (cdkal1)
Transfer RNA biogenesis [BR:
cmk03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
103184908 (cdkal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
103184908
NCBI-ProteinID:
XP_042188360
LinkDB
All DBs
Position
Unknown
AA seq
571 aa
AA seq
DB search
MPAACDSLVEDIEDIVSAQDITPNDRHFAKKSVVPRARKRNKHKQDEEDLQADSVIPGTQ
KIWVKTWGCSHNNSDGEYMAGQLAAFGYKITENSSDADLWLLNSCTVKNPAEDHFRNSIQ
KAQEQRKKVVVAGCVPQAQPRMDYIKGLSIIGVQQIDRVIEVVEETIKGHSVRLLGQKKD
NGKRLGGAPLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGELASYRIEELVDRAIQ
SFKEGVCEIWLTSEDTGAYGRDLGTDLPTLLWKLLEVIPEGAMLRLGMTNPPYILEHLEE
MAKILIHPRVYAFLHVPVQTGSDSVLMDMKREYCVADFKRVADFLKEKVPGITIATDIIC
GFPGETEEDFQETVKLVKEYKFPSLFINQFYPRPGTPAAKMEQVPAQEKKKRTRELSQLF
QSYSPYGHKVGENQYVLVTEESFDGNYYVAHNKFYEQVLVPKQPEFLGKMIEVNIYEAGK
HFLKGQPAQNSKVYTPSIAKPLAKGIVSGMSEELKTFHENGTALDTHHSHSGQFSSSSLS
TWNSEGLKEKMVPIILALLAVLVAITVKILR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgccggctgcttgtgattcattagtggaagatattgaagatattgtgtcagcacaagat
atcacacctaatgatcgacactttgcaaagaagagtgttgttcctcgtgccaggaaaaga
aataagcacaaacaggatgaggaagatctccaagctgatagtgttatccctggtacacag
aagatctgggtgaagacttggggctgttcacataacaattcagatggagaatatatggct
ggtcaactggctgcctttggatacaaaatcacagagaattcgtctgatgcagatttgtgg
ctgttgaacagttgtaccgtgaagaatccagctgaagaccactttagaaactcgattcag
aaagctcaagaacaaaggaaaaaggtggtagtagctggatgtgttcctcaagcccaacct
cgaatggactacatcaaagggttgagtattattggggttcaacaaatagaccgtgtcatt
gaagttgttgaagaaacaattaaaggtcactctgtgagacttctaggtcagaaaaaggat
aacggtaaacggctagggggagcgccactggatttgccgaagattaggaaaaatccattg
atagaaatcatttccatcaatactggatgcctgaacgcttgcacgtactgcaagaccaag
catgccagaggagaactcgccagttaccgcattgaagagctggtggaccgagccattcag
tctttcaaagagggcgtttgtgaaatatggctgaccagtgaagatacaggagcctatgga
agggacctagggacagacctgccaacattgctgtggaaactgttggaggtgattcctgag
ggagcgatgttgcggcttgggatgaccaatcctccgtatatcttggaacatctggaggaa
atggcaaaaatcctcattcatcccagggtgtatgccttccttcatgtaccagttcaaact
ggttcagatagcgttcttatggatatgaaaagagaatactgtgtggcagactttaaaagg
gtggcagatttcttgaaggaaaaggtgccagggattacaattgccacagatattatatgt
ggttttccaggagagacagaagaggatttccaggaaaccgtgaaactggtcaaggagtac
aaatttccaagcttgttcatcaatcagttttacccacgtccgggaaccccagccgccaaa
atggaacaagtccctgcccaagagaaaaaaaagagaaccagggagttatcgcagctgttt
cagtcgtattccccatatggtcacaaggttggtgaaaatcaatacgtgctggttacagag
gaatcatttgacgggaattactatgttgctcacaacaaattctacgagcaggtcctggta
cccaagcagccggaatttctggggaaaatgatagaggtgaatatttatgaagcaggaaaa
catttcttgaagggacagccagcacagaattcgaaagtctacaccccctcgattgccaag
ccattagcaaagggaatagtttcgggtatgtcagaggaattgaagacctttcatgagaac
ggcacagcccttgatacacatcactcccatagtgggcagttttctagttcaagtttgtca
acatggaactcggaaggcctaaaagaaaagatggtgccaatcatactagctttgttggca
gtgttggtggctattactgtgaagatactcaggtag
DBGET
integrated database retrieval system
