Callorhinchus milii (elephant shark): 103185383
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Entry
103185383 CDS
T03088
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04137
Mitophagy - animal
cmk04140
Autophagy - animal
cmk04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103185383 (hif1aa)
04137 Mitophagy - animal
103185383 (hif1aa)
04148 Efferocytosis
103185383 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmk03000
]
103185383 (hif1aa)
Transcription factors [BR:
cmk03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
103185383 (hif1aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
PAS_11
HIF-1
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
103185383
NCBI-ProteinID:
XP_042194039
LinkDB
All DBs
Position
Unknown
AA seq
785 aa
AA seq
DB search
MEDSEMQTDDDTAGQVNPEKKRVSSERRKEKSRDAARCRRSKESEVFYELAHQLPLPHSV
SSHLDKASIMRLTISYLRMRKLLSPRDVEVEPDREKQLNSFYLKALEGFVLVLTQDGDMI
YMSENVNKYMGLTQFELIGHSIFDFTHPCDHEEMREMLSHRQGLQKKGKDQITERSFFLR
MKCTLTSRGRTVNIKSSSWKVLHCTGHIQVHEGSDEQTPCGYKEPPMTCLALVCEPIPHP
SNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYQPDELLGRSVYEYYHAMDSDHLTKT
HHDLFSKGQATTCQYRMLSKEGGYVWVETQATVIYNTKNSQPQCIVCVNYVLSGVVEKGV
VFSLDQTESVPVTDESPDTIETTGKSYNSPTDQESNDLFNKLKEEPEALTQLAPAAGDTI
ISLDFSPSDSEMQHFPLYNDVMLPSSTEQKPVELSPLPPSDPTKSLCSTTDPALNLEAIT
KLETNPESLELSFTIPQMKEQPNSPSCPSTNQSSPQPSSPSEYCYNVDTDMSNVFKLDIV
EKLFAVDPEAKNPFSVQDVDGLDLEMLAPYIPMDDDFQLRSLDQLSPLTDIQASPPHSQS
VSSIVNLFQSAPKSAKNSTEKYAPALKISLENTESLSASQSSPSPLHMMDEVSSTPGSPY
SKPTSRTASPVRTIGKGLLSEQMDASRSGSPMSPVKPVLTYNKRSAAGGNLQEEVDAKLL
SLHNLQRKRKIENAASLFQAAGIGLLSQNDIIPPVTAPQIWKRAKRSDTTSIATKEKTLA
SLPTV
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggaagactctgaaatgcagacggacgacgacaccgccggtcaggtcaaccccgagaag
aaacgtgttagctcagagcggagaaaggagaagtctcgtgatgctgccaggtgccgaaga
agcaaagaatctgaggtcttttatgagttggcccatcagctgccattgcctcacagtgtc
agctctcacctggacaaggcctccataatgagattgaccatcagctatctgcgaatgaga
aaattacttagtcctagggatgttgaggtggagcctgatcgagagaaacagctcaacagc
ttttacttgaaggccctggagggatttgttttagtgctgacacaggacggagatatgatc
tacatgtctgagaatgtcaacaagtatatgggactaacccagtttgaactgatcgggcac
agcatctttgatttcacgcacccttgtgatcatgaggaaatgcgggaaatgctctcacac
aggcagggacttcagaagaaggggaaggaccagatcacagaacgcagtttcttcttgaga
atgaaatgtacactcaccagccggggccggactgtcaacatcaaatcctcgtcttggaag
gtgcttcactgcacagggcacattcaagtacatgaaggcagtgatgagcagaccccttgt
ggctacaaggagccacccatgacctgtctggcattggtttgtgaacctatcccacaccca
tccaacattgaggtacctctggacagcaagacatttctgagtcgtcacagcctagacatg
aagttttcctactgtgatgagaggataactgaattaatgggatatcaaccagacgaactg
ctgggtcgatctgtctatgaatactaccatgctatggattcagatcatctgactaaaact
catcatgacttgttttctaagggccaggccaccacatgccagtacaggatgttgtccaag
gaaggtggttacgtttgggtcgagactcaggctacagtgatctacaacacaaagaattcc
cagccacaatgcattgtctgtgtgaactatgttttgagtggtgttgttgaaaaaggggtt
gtcttttcactggatcagactgagagtgtacctgtaactgatgagtcacctgacacaatt
gagacaactggcaagagctataattcacccacagatcaagaatctaatgatcttttcaac
aaactgaaggaggagcctgaagctttgactcaacttgcaccagctgcaggcgacacaatt
atctccttggatttcagtccttcagattcagaaatgcagcatttcccactctacaatgat
gtcatgttaccatcctcaacagaacagaagcctgtagagttgtcgccccttcctccctct
gaccccactaagtcgctgtgcagcaccacggacccagccttgaatttggaagcaattacc
aagcttgaaacaaacccagagtcactggaactttcatttaccattccacaaatgaaggag
cagcctaatagcccttcctgtcccagcaccaatcaaagctcaccacaacccagcagtcca
tcagaatactgctataatgttgatacagacatgtccaatgtgtttaaactggatattgtt
gaaaagctctttgcagttgacccagaggccaaaaacccattctctgttcaggatgttgat
ggcttggatttggagatgttggctccatacatcccaatggatgatgattttcagcttcga
tcattggaccaactttcacccctcacagatattcaagccagcccacctcattcacagagt
gtaagcagtattgtgaacctcttccagtcagccccaaaatctgctaagaactccactgag
aaatacgcaccagcgttaaaaatttctttggaaaacactgagtctctctctgcatcccag
tcttccccttctcccctgcacatgatggatgaagtcagtagtactccaggatcaccgtac
agcaaaccaaccagcagaaccgcttctcccgtccgaacgattggaaaaggattgctgtct
gaacagatggatgcttcacgttcaggaagtccaatgtctccagtgaaaccagtgctgact
tataacaaaagatctgcagcaggaggaaacctgcaggaagaggtggacgccaagttgctg
tctttgcacaacttgcagcggaaacgcaagatagaaaatgcagcctctctttttcaagcc
gctggaattgggttgttgtcccagaatgacattattcctccagtgacagcaccgcagatt
tggaagcgtgcaaaaagatctgataccacgagcatcgcaactaaagaaaagacgttggcg
tcgttgcccacagtctga
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