Callorhinchus milii (elephant shark): 103185671
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Entry
103185671 CDS
T03088
Symbol
hdac1
Name
(RefSeq) histone deacetylase 1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03082
ATP-dependent chromatin remodeling
cmk03083
Polycomb repressive complex
cmk04110
Cell cycle
cmk04330
Notch signaling pathway
cmk04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103185671 (hdac1)
03083 Polycomb repressive complex
103185671 (hdac1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
103185671 (hdac1)
04350 TGF-beta signaling pathway
103185671 (hdac1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
103185671 (hdac1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmk03036
]
103185671 (hdac1)
Enzymes [BR:
cmk01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
103185671 (hdac1)
Chromosome and associated proteins [BR:
cmk03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
103185671 (hdac1)
HDAC complexes
Sin3A-HDAC complex
103185671 (hdac1)
BRAF-HDAC complex
103185671 (hdac1)
REST complex
103185671 (hdac1)
SHIP complex
103185671 (hdac1)
MiDAC complex
103185671 (hdac1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
103185671 (hdac1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
103185671 (hdac1)
Chromatin remodeling factors
NuRD complex
103185671 (hdac1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
103185671
NCBI-ProteinID:
XP_042194678
LinkDB
All DBs
Position
Unknown
AA seq
487 aa
AA seq
DB search
MALTQGGTRKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
SAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNKQQTDIVINWTGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYES
IFKPVMVKVMEMYQPSAIALQCGADSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPLLMLG
GGGYTIRNVARCWTFETSVALGAEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTIEYL
EKIKQRLFENLRMLPHAPGVQMQPIPEDAVPEDSGDEDEDDADKRISIRASDKRIACDEE
FSDSEDEGEGSRRNAANYKKPKRSKVEEEKEEEKTADGKEEEKAKDGVPEKLETKGIKVE
ETKPSNA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcactcagggcgggacgaggaagaaagtttgttattattatgatggtgatgtt
ggcaattactactatggacagggccacccaatgaaaccgcacaggattcggatgacccat
aatctgctgctgaactatggcttgtacagaaaaatggaaatttatcgtccccacaaagct
tcagctgaagaaatgacaaagtaccacagtgacgattacatcaagttcctgcggtccatc
cgtccagacaacatgtctgaatacagcaagcagatgcaaagatttaatgtaggtgaggac
tgccctgtattcgatgggctgtttgaattttgccagttgtcaactggaggctcagttgct
ggagctgtgaagttgaacaaacagcaaactgatattgtcatcaactggactggtgggctt
catcatgcaaagaaatcagaggcatctggtttttgttatgtgaatgacattgtcttagct
attctcgagctacttaagtatcaccaacgagtgttgtatattgatattgatatccatcac
ggcgatggggttgaagaggccttttacaccacagatcgagtgatgacagtttcgttccat
aagtacggtgaatatttccctggcacaggagatctgcgggatataggtgccggtaaaggc
aagtactatgctgtaaacttccctctgagagatggaattgatgatgaatcctatgaatcc
atattcaaacctgtcatggttaaagtaatggagatgtaccagcccagtgcaatcgctctc
caatgtggtgctgattctctatctggagaccggctgggctgttttaatcttaccattaaa
ggacatgccaagtgtgttgaatttgtgaagagctttaacttacctctgctaatgctggga
ggtggaggctacacaatccgcaatgtggctcgatgctggacatttgagacatctgtagct
ttgggcgctgagatcccaaatgagctgccatacaatgattactttgaatactttggacca
gattttaagctgcacatcagtccttctaatatgacaaaccagaacacgattgagtacctg
gaaaagattaagcagcgtttgtttgagaacttgcggatgttgccccacgcgcctggtgtt
cagatgcagccaatcccagaggacgcagttccagaagacagcggagatgaggatgaagac
gatgcagacaagcgcatttccattcgtgcgtcagataagagaatagcgtgtgatgaagag
ttctcagactctgaagacgaaggggaaggaagtcgccggaacgctgcgaattacaagaaa
ccaaagcgctcgaaggtggaggaggagaaggaagaagagaaaacagcagatggtaaagag
gaagaaaaggccaaagatggagttccagaaaaactagagactaaaggaataaaagtagaa
gagacgaaaccaagcaatgcataa
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