Callorhinchus milii (elephant shark): 103187294
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Entry
103187294 CDS
T03088
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103187294 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmk03019
]
103187294 (nup98)
03036 Chromosome and associated proteins [BR:
cmk03036
]
103187294 (nup98)
Messenger RNA biogenesis [BR:
cmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103187294 (nup98)
Chromosome and associated proteins [BR:
cmk03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103187294 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
103187294
NCBI-ProteinID:
XP_042190082
LinkDB
All DBs
Position
Unknown
AA seq
1819 aa
AA seq
DB search
MFNKSQFGAPTFGNTSGFTGSAFGQNTGASGFGGFGPTPAGFGATSNAAGGLFGATQSKP
GGLFGSSSFGQPATSSTNAGFGFGTPTSSSLFGATNTGGLFSTQPNNAFTQNKPAGSFGT
FGTSTSGGGLFGTTSTASNPFGGTSGTLFGGTSFTPTAPNGTTIKFNPPTGTDTMVKSGV
STSISTKHQCITAMKEYETKSLEELRLEDYTAGRKGPQTPLVGAGGLFGASTATSSAGAS
LFGATPPNTSGGFNFGQNKAGFGANTGLLSKLGVVGTGCAATLQKTGTGAFGTPAGGLFG
PAQPQAATGLFGNKPFGLATTTQSTGFSFGNANPLGQPNTSSMSLFGSAPATQSGGIFGT
NTNTSTGTGFGTGAGLFGNTAAGFGNVGTGGLFANKPAGFGTTTTSASTFGTAGAGLFGN
KPNLTIGANTNPSTFGFGTAAGTGGLFGNKPTTGVLGAGLGAGFGAGAGQTSLFGNTQPK
LGAGLGAGAFGTTPFNTAGTAVGFGAPQAAICLTDPAASATQQAVLQQQLSALAYTPFGD
SPLFRNPMVDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPATRVRLKALQASGSVKAHL
FDGLDDDEPAALANGTFLPRKSIKKLMLKTPSSSLTFSPTVLKETEELPSASEYPENGEL
EHEGRSELEREEENPEVTKFYTNCIVKPIPQTPEGLIGHKTLGSTMEDTISAMNLRNLRN
GNLEGSSEDASFIEGSLHEDPEEEEERAPPHPAGIVLTRVGYYTLPSMEELARTTTESGE
CIVENFTIGRKGYGSIYFPGVVNLSNMNLDEIVHIRRKEVIVYLDDERKPPASEGLNRRA
EVTLDGVWPTDKTTRSPIKSPERLLEMGYEERLENASRKQGARFLEYRSETGSWVFEVAH
FSKYGLKESDEEDEELPSKAETKKLKTASLPSQQAQQAAPSPKPAPTSQSPSLERVARVA
ELDSDMTDITQEPLPDCYLEEDITEEQEPVSASSNIASTLGINPHTLQIMKASLFAEDED
MDGIVERRFTRFPPVPDTSLELGSPHRLCPGPRGRTSVGGLLQSKFTSSSLLLSGARLQD
SPEAPSPRAWLVPTPLPSAFAMPSPLPDVPLRTVGVRRQQRLVQLERSVTRGKGRLLMDM
GLFIGRSFRVGWGPGSTLCHAGDRLSVPTTDTETPEQDGLEYGFFPKPVKVKQLSELPFK
VHVERVMLRGERGDGDLYQEPLEIALRHSSVQTQDGCPLITPQPGVEALHQYVDWVQTAL
TGSEEKEAVLRRWGLVWTLCEALWGRLKALEPRASQHSPYVQQLERRRAFSHWLSLTAHH
RIEQEVAVAQETGHVDAVFSYLTGKRISEACRLAQRSGDHRLALLLAQAVGSEQVRELLA
MQLLDWHQLTADQFMQEDRLRIVALLAGKPVWETSEGVVNACSQLDWKRCLAIHLWYVLP
PTASVADALRVYDDAFKGTETVQSYARFPLPGYLEDCEIAARSEEDQTPPQDICYHLLKL
HSDRYHELPQLLSPGTVTEERLDYRLSWHVWAVLQALNYSHVSEKQQGLVHSSYAAQLES
AGLWHWAIFILLHIPSSQRRERAVRELLARHCPLVETEEWQRREEFLRHSLAVPARWIHE
AKALRAHRDGDAHREALHLLEAGHWNACHQLVVSQLASDAIINEKHSYLQQFLERLAQPE
SRAHIQDWDNAGSIFLQYIRITQNLQRVQTEIGGQSYELERLHTDVMSLCGRIQLIQCHT
ARDQLAQSDMAKKMSNMMRVVLSMQHSEEVGGEMVPDLQRVPVCLLAPHLRQLPMPEDYA
LEELRSLTQVYLQELIVAQ
NT seq
5460 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataaatcgcagttcggtgcccccaccttcggcaacaccagtggcttcaccggc
tccgccttcgggcaaaataccggtgcctcagggtttggtggattcggcccaacaccagcc
ggcttcggtgccaccagcaatgccgcgggagggctatttggtgccacgcagagcaaacca
ggtgggctgttcggctccagcagtttcggtcagccagcgacctcctccaccaatgctggc
ttcggttttggcaccccaacctccagcagcttgttcggggctaccaacaccggcggtctc
ttctccacacagccgaacaatgccttcacccagaacaagcccgcaggaagctttggaacc
ttcggaaccagcaccagcggtggaggcttgtttgggacgacgagtacggcctccaacccc
ttcggaggaacgtcggggacgctgttcgggggaacatccttcacccctactgctcccaat
ggaaccactattaaattcaaccccccaacggggacagatactatggtgaagtctggggtg
agcaccagcatcagcaccaaacaccagtgcatcaccgctatgaaggagtacgagaccaag
tctttggaggagctgcgcctggaggactacacggcaggccgcaagggcccgcagacgccc
ctggttggggcgggcgggctgttcggggcctccacagccacctccagcgctggggccagc
ctgttcggagctactccccccaacacaagtggaggcttcaactttgggcagaacaaagcc
ggcttcggagcaaacacggggctgctttcgaaattgggcgtggtgggaactgggtgtgcg
gccactctgcaaaaaacaggtactggtgcattcggcactcctgcgggagggctcttcggc
ccggctcagccccaggcggccaccggactctttggcaacaaaccgtttggcctggcaaca
accacccagagcaccggcttcagcttcggcaatgccaaccctttgggacaacccaacacc
agtagcatgagtttgttcggcagtgccccagccacacagtccggtgggatcttcggcaca
aacaccaacactagcacgggaacggggttcggaaccggcgcggggctgttcggcaacacc
gccgctgggtttggcaatgtcggcactggcgggctgtttgctaacaaacccgctgggttt
gggacgaccacgaccagcgcttctacctttggcacggccggtgccgggctgttcggtaac
aaaccaaacctgactataggagccaataccaatccgtcaacctttgggtttggaacagcc
gcgggaaccgggggcctatttgggaacaagcccaccaccggcgtgctgggagctggtctg
ggagcaggattcggagcaggtgctgggcagacgtccctgtttggcaacactcagcctaag
ttgggcgcaggcctgggagcgggggcgtttggaacaaccccattcaacacagcgggtacc
gcggtgggctttggggctccccaggccgctatctgcctgacggaccctgcagcctcggcc
acacagcaggctgtgctccagcagcagcttagcgctttggcctacacaccgttcggggac
tccccactcttcaggaatcccatggttgatcccaagaagaaggaggagcgactgaagccc
acgaaccccgcagcacagaaagccttgacgacgcccacacattacaagttgacgccaagg
ccagccaccagggtacggctgaaagccctgcaggccagcggctccgtcaaggctcatctc
ttcgatggactggatgatgatgagccagcggccctcgcaaacggtaccttcttacccagg
aagagcatcaaaaagctgatgctgaaaacgccctccagctctctgaccttctcccctacc
gtcctcaaagagactgaggagctgccttctgcctctgagtacccagagaatggggagctg
gagcacgagggcaggagtgagctggaacgggaggaggagaatcccgaggtgaccaagttc
tacactaactgtatcgtaaagcccatcccgcagacccccgaggggttgatcggccacaag
accctgggcagcaccatggaggacaccatctccgccatgaacctgcgcaacctgaggaac
ggaaacctggagggcagcagtgaggacgcctccttcattgagggctccttgcacgaggac
cccgaggaggaggaggagagagcacccccacatcccgccggcattgtgctgaccagagtt
ggctactacaccctcccctcaatggaggagttggcccgtaccaccaccgaaagcggggaa
tgtatcgtggagaacttcaccatcggacgcaaaggctacggctctatctacttcccgggc
gtggtgaacctgagcaacatgaacctggacgagattgtacacatccgcaggaaggaggtc
atcgtgtacctggacgatgagaggaaaccgccagccagtgagggtctgaacaggcgagct
gaggtgaccctggatggagtgtggccgacagataaaaccacgcgcagtcccattaaatcc
cctgaacggctgctggaaatggggtacgaggagcggctggagaacgcctcccgcaagcag
ggagctcgcttcctggaatatcgctctgagactggctcctgggtctttgaggttgcccac
ttcagtaagtacggactgaaggaatctgacgaggaggacgaggagctgccgtccaaagct
gagaccaagaagctgaaaacagcgtctcttcccagccaacaggcccagcaagcggccccg
agccccaagcctgcccccacctcacagagtccctcgctggagcgtgtggctcgtgtggca
gagctggacagcgatatgacagacatcacacaggagcccctccctgactgctacctggag
gaggacataacagaggagcaggagccagtgtcggcctccagcaacatcgcttctaccctg
ggcatcaacccccacacactgcagataatgaaggcctccctgtttgctgaggacgaggat
atggacggcatcgtggagcggcgcttcacgaggtttcctcccgtccccgacacaagcttg
gagctgggatcaccacaccggctgtgcccgggtcctcgcggcaggacctcagtgggcggt
ttgttgcaatctaaattcaccagctcctccctgctgctgtcgggggcccggctccaggat
tcccctgaggccccctctcctcgggcctggttggtacccacgccgctgccctcagccttc
gccatgcccagcccactgcctgatgtgcctctcaggacggtgggtgtgagacgacagcag
agattggtgcagctggagcgctctgtcacccggggcaaaggccggctcctcatggacatg
ggcctgttcatcggccgctcattcagggtgggctggggtcctggctccaccctgtgccac
gctggggaccggcttagcgtgcccaccaccgatacagagaccccagagcaggacggtcta
gaatacggcttcttccccaaacctgtcaaagtcaaacagctttcagagctgccgtttaag
gtccacgtggagagggtgatgctacggggagagcgaggagacggggacctgtatcaggag
ccgttggagatcgcactgagacacagcagtgtgcagacacaagacggctgtcccctcatc
accccgcagccaggcgtggaggcactacaccagtatgtggactgggtgcaaacggcgctc
accggctcagaggagaaggaagctgtgctgaggcgctggggactggtgtggacgctgtgt
gaggctctgtggggtcggctgaaggccctggaacccagagcctcccagcacagcccgtac
gtccagcagctggagcgcaggcgagcgttctcccactggctctcgctcaccgcacatcac
agaatcgagcaggaggtggcggtggctcaagagacaggccacgtggacgcggtgttcagt
tacctgaccggcaagcggatcagcgaggcctgcagactggcccagcgctccggagatcac
cggctggcactgctgctggcacaggctgtgggcagtgagcaagtgcgggagctgttggcg
atgcagttgttggattggcaccaactgacggccgatcagttcatgcaggaggacaggctg
cgtatcgtggccctgctagctggcaagcctgtgtgggagacgtctgagggtgtggtgaac
gcgtgctcacagctcgactggaagcgatgtctagctattcacctctggtacgtgctgccg
cccactgcctccgtggctgatgccctgagagtctacgatgatgccttcaagggcacagag
acagtacagagctacgcacgattcccgttgccgggatatctggaggattgtgagatagct
gcgaggagcgaggaggaccagaccccaccccaggacatttgctatcatctgctcaagctc
cacagtgacaggtaccacgagttgccgcagttgctgagcccgggcactgtgacggaggag
cggctggattaccggctaagctggcacgtgtgggcggtgctgcaggccctcaactacagc
cacgtgtcggagaaacaacagggcctggtccacagcagctacgccgctcagcttgagagc
gccggcctctggcactgggccatcttcatcctcctgcacatccccagctcccagcgacgg
gagcgtgcggtgcgggagctgttggcacggcactgccctctggtggagacggaggagtgg
cagcggagggaggagttcttgcggcacagcctggcagtgccggcccggtggatccacgag
gccaaagcgctgagagctcaccgcgacggcgacgcccacagggaggccctgcacctgctg
gaagccgggcactggaacgcctgtcaccagctggtggtcagccagctggcctcagacgcc
atcatcaatgagaagcacagttacctgcaacagttcctggagagactggctcagcctgag
agcagggctcacatccaggattgggacaacgctggctccatcttcctccagtacattcgc
attacccagaacctgcagcgtgtgcagaccgagatcgggggccagagctacgagctagag
aggctgcacacggatgttatgtcgctgtgtggtcggatccagctgatccagtgtcacacg
gccagggatcagctcgcacaatccgacatggcgaagaagatgtctaacatgatgcgggtg
gtgctgagtatgcagcacagtgaggaggtgggaggggagatggtccctgacctgcagcga
gtgccagtctgcctgctcgccccacacctgcgacagctccccatgcccgaggactacgcg
ctggaggagcttcgaagcctgacacaggtctacctgcaggagctgatcgtcgcccagtga
DBGET
integrated database retrieval system
