Callorhinchus milii (elephant shark): 103187553
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Entry
103187553 CDS
T03088
Symbol
smarca4a
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103187553 (smarca4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmk03021
]
103187553 (smarca4a)
03036 Chromosome and associated proteins [BR:
cmk03036
]
103187553 (smarca4a)
Transcription machinery [BR:
cmk03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103187553 (smarca4a)
Chromosome and associated proteins [BR:
cmk03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
103187553 (smarca4a)
Chromatin remodeling factors
BAF complex
103187553 (smarca4a)
PBAF complex
103187553 (smarca4a)
GBAF(ncBAF) complex
103187553 (smarca4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
103187553
NCBI-ProteinID:
XP_007905293
LinkDB
All DBs
Position
Unknown
AA seq
1639 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSTHSMMGPSPGPPSTGHSMPPQG
PGGYPPDSMHQLHKAMESMHEKGMSDDPRYGQIKSMGMRSGAHSGMGPPPSPMEQHSQGY
PSPLGGPEHAPSPVPANGPPTGPPMPSGPGGVPMDGGDPQNLAQLNRGPSPFNQGQLHQL
RAQIMAYKMLARGQPIPDHIQLAIQGKRPLPGVQQQMPSLPPPSASGTGAGTGATPGNYN
RPLGETSLNRPLRSSDMTALRMGGSNMLPPGASGVSQGMPCQPPGPPKSWPEGSMANATA
PTSAPQKLAPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPTQPAPMVQLHSKQNRITP
IQKPRGLDPVELLQEREYRLQARISHRIQELENLPGSLAGDLRTKATIELKALRLLNFQR
QLRQEVVVCMRRDTALETALNSKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQE
YLNSILQHAKDFKEYHRSVTGKMQKLTKAVATYHANTEREQKKENERIEKERMRRLMAED
EEGYRKLIDQKKDRRLAYLLQQTDEYVANLTELVRQHKAVQAAKEKRKKKKRKKPENVDG
LGSAVGPDGELLDETSQMSDLPVKVIHVESGRILAGADAPKAGQLDTWLEMNPGYEVAPR
SDSEDSGSEEEEEEEEEQPPPPPPPPPPPPSPPAPEEKKKIQDPDSEDVSEMDARQIIEN
AKQDVDDEYSAANSSIRGLQSYYAVAHAVTERVDIQSTLLINGLLKQYQVKGLEWLVSLY
NNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSV
VRISYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHVLAKIRWKYMIVDEGHRMKNH
HCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAM
TGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYR
HMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGI
VQGADLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRSFKYLRLDGT
TKSEDRGMLLKTFNEPGSHYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDR
AHRIGQLNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQA
ILEHEEQDECEVVSAEVKGSDGHTEEDEVPDDETVNQMIARSEEEFELFMRMDLDRRREE
ARNPKRKPRLMEEDELPNWILKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQ
WLKAIEEGNLEEIEEEVRQKKARKRSKRDVDPPVVMATTSTRSSREKDDDEKKKKKRGRP
PAEKLSPNPPHLTKKMKKTVDAVIKYKDSNTGRQLSEVFIQLPSRKELPEYYELIRKPVD
FRKIKERIRNHKYRCLNDLERDVMLLCQNAQTYNLEGSLIYEDSIVLQSVFTSVRQKIEK
EEDSEEDSEEGEEEEEEGSESESRSVKVKIRLGRKEKGSDRVKARKRSSRISKSKPIVSD
DDTEDEVDEDRSGSGTEED
NT seq
4920 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactcccgatcctccaatgggcgggacccctcgcccaggcccctctcctggccca
gggccctcccctggggcgatgctgggccccagtcctggcccctctcccggctccacacac
agcatgatgggaccgagtcctggacccccgtccacaggccattccatgcccccccaagga
ccgggaggatatccccctgacagcatgcaccagctccacaaggccatggagtccatgcac
gagaagggaatgtctgatgaccctcgctacgggcagatcaagtctatgggcatgagatcc
ggggcgcacagcggcatgggacccccacccagccccatggagcaacattcccaaggctac
ccgtcccctcttggaggcccagaacatgccccgagtcctgtacctgccaacggcccccca
acgggaccgccaatgccttctggaccgggaggagtaccgatggatggtggagacccccag
aatttagcacagctaaaccgcggcccgtctcctttcaaccaaggtcagctgcaccagctg
cgggctcagatcatggcttataagatgctggcgagaggccaacccattcccgatcacatc
cagctggccatccaaggcaagagaccccttcctggtgtccagcagcaaatgccatcactg
cctcccccctctgcctccgggactggagctgggactggggccaccccgggaaactataat
cggccactcggagaaaccagtctcaatcgaccactacgctccagtgacatgacagccctc
aggatgggaggatccaacatgctgcctccaggagcctctggagtcagccagggaatgcca
tgccagcctcctggcccgccaaaatcctggccagaaggctcaatggcgaacgctactgct
ccgaccagcgctcctcagaaactggctccaccacaacccaccggccggccttcaccagct
ccccccgcagtgcccccagctgcgtcccccgtcatgccccctcagacgcagtcaccgggg
caaccaactcagccagcccccatggtacagctccattcgaaacaaaaccgcattaccccc
attcagaaaccacgagggctcgatcccgtcgaactcctccaggaacgggaatacaggctc
caagcacggatttcccatcggattcaagagctggagaatctcccagggtctctagcgggc
gacctgcgaaccaaagccaccattgaactcaaagctctgcggcttctgaactttcagagg
cagctgcgtcaggaggtggtggtgtgtatgaggagggacacggcgctggagacggcattg
aactccaaggcgtataaacgcagcaagcgtcagtcgctgcgagaggcgcgcatcacagag
aaactggaaaagcagcagaaaatcgagcaggaacgcaaacgccgacagaagcaccaggaa
tacctcaacagcatcctgcagcatgccaaggacttcaaagagtaccaccgctcagtcact
gggaagatgcagaaactcacaaaagcagtagccacctatcacgctaacaccgagcgagag
cagaagaaggagaacgagcggatcgagaaggagaggatgaggcggctgatggcggaagat
gaggaaggttatcggaagctgattgatcagaagaaggaccggcgcttggcatacctgctg
cagcagaccgacgagtacgtggccaacctgacagagttggtgcggcagcacaaggcagtg
caggcagccaaggagaagaggaagaagaagaagaggaagaagccggagaacgtggatggc
ctgggctccgctgtcggtcctgatggggaacttttggatgagaccagtcagatgagtgac
ctgccggtgaaggtgatccacgtggagagtggccggatactggctggggccgacgcacca
aaggccggccagctggacacctggttggaaatgaatcctggctatgaagtggcgccgagg
tctgacagcgaagacagtggctcagaggaagaggaagaggaggaggaggagcagccaccc
ccgcccccaccgccaccgccccccccaccctcacctccggcccccgaggagaagaagaaa
atccaggacccagacagcgaggacgtctcggagatggacgccagacagatcatcgagaac
gcaaagcaggacgtggatgatgaatacagcgctgccaactctagtatccgcgggctccag
tcctactacgccgtggctcacgcagtcacagagagagtcgacatccaatccacactgctc
atcaatgggctgctcaaacagtatcaggtgaagggtctggagtggctggtgtccctgtac
aacaataacctgaatggaatcctcgctgacgagatgggtctggggaaaaccattcagacc
atcgccttgatcacttacctcatggagcacaaacgcattaacgggcccttcctcattatc
gtccccctctcgactctgtcaaactgggcctatgagtttgacaaatgggcaccatctgtg
gtcaggatctcatacaagggctcaccggctgcaaggcgagcttttgttcctcagcttcgc
agcgggaaatttaacgtgctgctgacaacgtacgagtacatcattaaagacaagcacgtc
ctggccaagatccgatggaaatacatgattgtggatgagggacatcggatgaagaaccac
cactgtaagctaacccaggtactgaacacgcactacgtggctccgcgacgactgctgctg
accggaacgcccctacagaacaagctgccggagctctgggctctactcaacttcctgctg
cccaccatcttcaagagctgcagcaccttcgagcaatggtttaatgcccctttcgccatg
acgggggagaaggtggacctgaatgaggaggagacgatactcatcattcgccgtctgcac
aaggtgctccgtcccttcctgctgaggcgattgaaaaaggaagtggaagctcaactgcct
gaaaaggtggagtatgtgattaagtgtgacatgtcggcgctgcagagagtactgtaccgg
cacatgcaggccaagggggtgctgctgacggacggctcagagaaggacaaaaagggcaaa
ggaggcaccaagactttaatgaatactattatgcagctgagaaagatttgtaatcacccc
tatatgttccagcacattgaggaatccttttcagaacatttggggtttactggaggaatt
gtgcaaggagcggacctttaccgagcgtcagggaagtttgagctgctggatcggatcctc
cccaaactgcgggccacaaatcacaaggtgcttctcttctgtcagatgacctccctcatg
accatcatggaagattactttgcgtatcgtagctttaaatatctccggctagacggaacc
acaaagtctgaagatcgggggatgctgctgaaaactttcaacgagcctggttcccattat
ttcatcttcctgctgagtacccgcgctggggggctggggctcaatctacaggctgcagac
actgtggtcatttttgacagcgactggaacccacaccaggacttgcaggcccaggaccgg
gcacatcgaatcggacagctgaatgaggtgcgtgtgctgcggctgtgcacagtgaacagc
gtggaagagaagatcctggcagcagccaaatacaagctgaacgtggatcagaaggtcatc
caagctggaatgtttgatcagaagtcctccagccacgagcgccgggcattcctgcaggcc
atcctggagcatgaggaacaggatgagtgtgaagtcgtgagcgcagaggtgaaaggatct
gatggacacacagaggaggatgaggtcccagatgatgagaccgtcaatcagatgatagcc
agaagtgaggaggagtttgagctatttatgaggatggatctggatcgtcgccgggaggag
gcaaggaatcccaaacgaaagcctcggttgatggaggaggacgagcttccaaactggatc
ctgaaggatgatgccgaggtggagaggctgacgtgcgaggaggaagaggagaagatgttc
ggccgaggctcgcggcagcgtaaggaggtggattacagcgactccctaactgagaaacaa
tggctcaaggccatagaagagggcaatttggaggaaattgaagaggaagtccgtcagaag
aaagcccgcaagcgtagtaagcgagacgtcgacccaccggtggtcatggcgaccacgagc
acacgcagcagcagggagaaggacgacgatgagaagaagaagaagaaacgaggccggccg
cccgcagagaagctgtcgcccaacccaccccatctcaccaagaagatgaagaagactgta
gatgcagtgatcaaatacaaggacagcaatacaggtcgacagctaagcgaagtcttcatc
cagcttccatctcgcaaggagctgccggaatattacgagctcatccgcaaacctgttgac
ttccgaaaaatcaaggaaaggatccgcaatcacaagtaccgctgcctgaatgacttggag
agggatgtgatgctgctgtgccagaacgcacagacctacaacctggaaggatctctgatc
tacgaagactcgattgtgctgcagtctgtcttcaccagcgtgaggcaaaaaattgagaaa
gaggaggacagtgaagaggacagtgaggaaggagaggaagaggaggaagagggctcggaa
tctgaatctcgctcagtgaaagtgaagatcaggctgggcaggaaagagaaaggatcagat
cgagtgaaagctcgcaagaggtcgagccgtatctccaagtcaaagcctattgtcagtgat
gacgacacagaagacgaagtagatgaggatcgctcgggcagtgggacggaagaagattaa
DBGET
integrated database retrieval system
