KEGG   Callorhinchus milii (elephant shark): 103190333
Entry
103190333         CDS       T03088                                 
Name
(RefSeq) lysine-specific demethylase 5B
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
cmk  Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cmk01009]
    103190333
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cmk03036]
    103190333
Enzymes [BR:cmk01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     103190333
Protein phosphatases and associated proteins [BR:cmk01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     103190333
Chromosome and associated proteins [BR:cmk03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    103190333
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 PHD_2 ASH2L-like_WH
Other DBs
NCBI-GeneID: 103190333
NCBI-ProteinID: XP_007909267
LinkDB
Position
Unknown
AA seq 1456 aa
MAKFWELQGSTLKIPHVERKILDLFLLNKLVAEEGGFDTVCKERRWSKVAHKMGYLPGKA
LGSLLRSHYERILYPYNLFQSGASLLKPGLVNDEKDQEYKPHDLAQRQSVQPSEISTQTR
RAKRMRSEVGCVKTEPSEITEVHIHDLRPKTRLGSMKRESGNAEKSNISGVKKEGNENRM
TDPERTRTLRNYRSTTATNVVDLYVCLVCGQGNEEDRLLLCDGCDDSYHTFCLLPPLNDV
PKGDWRCPKCLAQECSKPQEAFGFEQAPRDYTLRAFGEMADAFKSDYFNMPVHMVPTELV
EKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPIKNGKLKLRPDEQMYFDSGWNLNNMPV
LEPSVLTHVSADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPAYV
AEQLESVMKRLAPELFETQPDLLHQLVTIMNPNTLMAHGVPVYRTNQCAGEFVITFPRAY
HSGFNQGFNFAEAVNFCTLDWLPMGRQCVQHYRLLNRYCVFSHDEMICKMASKFKDLDLV
LASAVHKDMMIMIDDEKRLREAVRKTGVTDTVREKFELLPDDERQCTKCKTTCFLSAISC
PCKPNELVCLYHAKDLCFCAPNRHQLRYRYTLDDLYPMLHALRLYVAPYDEWTSKVTDSL
EAKETEKRGVMEFKSLIEEAENKTFPENDLFKQLQGVIVEAEKCASVAQRLLNDKRQTRY
RGGKSQYWLTVAELQAFVKQLYALPCLIDQAPLLKDLLHRVEDYQQRSEKALSDEMIDTV
ELQQLMDLSVGFNVELPKLQCLRERLEQARWLDKVHLAQSSPHTLKLDDMRRLIDSGVGL
TPHPAVERAMACLQELLTISEHWEEKAHSLLKARPRHSLITLSAALEDKGDIPTYLPHDL
ALKETVQKARDWLQEVESVQSSAQQPLLETLVELVSRGRAIPVQLDPLSLLESLLADVES
WKESVGETFQKKNPKCSLFEVLCPRSDFGVPGLKRKPKKLKEMLQNAKRKVPKLDSLAAF
NEARLKEMESIRSLQTTNRMKVLSDAECAEVKVCICQKPATGSMQQCELCKDWFHSSCIP
AANVQDGEMPWLCPLCLRSERPSLETILLLLSSLERIPVRLPEGEALHYLVERAMNWQHR
AKQILSTDELCFTLINSHLANQSWQGITEQIAATELEKRVAESSLQADSGTESESFTAVY
NRNLFIKEEEIAQAIPSWQICIPVQGLCLSDGVRSQLDELMMEALLLQLSLPEMQHIYRI
LQAAQCPVVEDVQGQSELLQCDPVAVQCRTETWSSCIAETEGCCLKSVKKDVISEKKRRL
DKEAFMGDKKEKLKKLSKPTKKNFRLNLQKSKNPNLGRIETEKYFEFLRPNEALSVIMEP
PYSEPEDSEDDDAICPAENCQQPEGDEVDWVQCDGSCNQWFHQICVGVSSETAEKDDYIC
VSCTVNGQIMQQNGND
NT seq 4371 nt   +upstreamnt  +downstreamnt
atggcaaaattctgggaactacagggatcaacattaaaaattccacatgtggaaagaaag
attttggatttgtttttactcaataagcttgtcgcagaagaaggtgggtttgacacagtg
tgtaaggaaagacgatggtcaaaagtggcacataagatgggatatctaccaggaaaagca
ttgggttcccttcttcgttcacactatgaacgtatcctgtatccttataatcttttccag
tctggagccagtcttttgaagccaggactggtcaatgacgaaaaagatcaagagtacaag
ccacatgatctcgctcagcgccagtccgttcaaccctcagaaattagtacacaaacacgt
cgggcaaaacggatgagatcagaggtgggatgtgtaaagaccgagcccagtgagatcact
gaggtccacattcatgatctgcgccctaaaacaagacttggatcaatgaaacgggaaagt
ggaaatgcagaaaagtccaatatatctggagtaaagaaagagggaaatgaaaaccggatg
actgatcctgagcgaaccagaaccctccgaaactacaggagcactacagccacaaatgta
gttgatctgtatgtttgcctagtgtgtggacaaggtaatgaagaggatcgactcctgttg
tgtgatggctgtgatgacagttatcataccttttgtcttcttccaccactgaatgatgtc
cctaaaggtgattggaggtgcccaaagtgtctggctcaggagtgtagcaagcctcaagaa
gcttttggttttgaacaagcaccaagggactacacactgcgtgcatttggtgaaatggca
gatgcctttaaatctgattacttcaacatgccagttcatatggttccaacagaactggtg
gaaaaggagttctggcgcttggttagcaccattgaagaggatgttacagtagaatatgga
gctgatatagcttctaaagaatttggtagtggattccccattaaaaatggcaaactgaaa
ttgagacctgatgaacagatgtattttgattcaggatggaatttaaacaacatgcctgtg
ttggagccttccgtcctgactcacgttagtgcagatatctgtgggatgaaattaccatgg
ctctatgtaggaatgtgcttctcctccttctgttggcacattgaggaccactggagttac
tcaatcaactatctgcactggggggaacccaagacatggtatggagcaccagcgtatgtg
gcagagcagctagagagtgtgatgaagaggttagcgcctgagttgtttgaaacacagcct
gaccttctccatcagctggtcaccatcatgaaccccaacacactgatggctcacggagtg
cctgtttacagaaccaatcagtgtgcaggagaatttgttattacgttccccagagcctat
cacagtggttttaaccaaggtttcaacttcgcagaagctgtgaatttctgtacattggac
tggcttccaatgggcagacagtgtgtgcaacattatcgtcttctaaatcgttactgtgtt
ttctctcatgatgagatgatttgtaagatggcctcaaagtttaaggatcttgatctggtt
ttagcttctgctgttcataaggatatgatgattatgatagatgacgagaagagattgcgg
gaggcagttcgtaaaacgggagtgaccgacactgtgagggagaaatttgagcttttgcct
gatgatgagcggcagtgtacaaagtgcaagactacttgtttcttgtcagcaatctcctgc
ccatgtaaacctaacgaactggtgtgcctgtaccatgctaaggacctctgcttctgtgca
ccaaacagacatcagctcagatatcgctacaccttggatgatctctatccaatgctgcat
gcattgagattatatgtagcaccctatgatgaatggacttccaaagtgactgattcgcta
gaagcaaaagaaactgagaagagaggtgtaatggaatttaagtctttgatagaggaagct
gagaacaaaacctttccagaaaatgatcttttcaaacagctgcagggagtgattgtagaa
gccgagaaatgtgccagtgttgcccagcggctgctgaatgataaacgacaaacccggtat
cgtggtgggaagtcccaatactggctaactgtggcagagcttcaggcatttgtgaaacag
ctctatgctcttccctgcctaattgaccaagctcctttactgaaggaccttctacaccgt
gtggaagattatcagcagcgctctgagaaggcactctctgatgaaatgattgatactgtt
gaactgcagcagttgatggatctcagtgttggttttaacgtagaattacctaaactgcag
tgtcttcgagagcgattagaacaagcacggtggctagacaaggttcaccttgctcaatct
tcaccgcacactctcaaactggatgatatgaggcggctaattgactctggggtaggatta
acgcctcacccagctgtggagagggccatggcttgtctccaggaactcctcaccatatct
gaacactgggaggaaaaagcccacagcctgctaaaggccaggcctcgacattctttgata
actctatctgctgccttggaagacaagggggatattcctacttatctccctcatgacctc
gctctgaaggagactgtacagaaggccagagactggcttcaggaagtggagagtgttcag
agctctgcccagcagcccctattggaaacattggtagaactggtgtcacgaggccgtgca
atcccagtgcaactggacccactatctctacttgaatccctgctggcagatgttgagagt
tggaaagaatctgtaggtgaaaccttccaaaaaaagaatcctaagtgctcgctttttgag
gtgttgtgtcccagatcagactttggtgtaccaggattgaagaggaagcccaagaagttg
aaagagatgctgcagaatgccaaaagaaaagttccgaagctggacagtttggcagctttt
aatgaagccaggctgaaagaaatggaatccattcgttccctccaaacaacaaaccgtatg
aaggttctttctgatgcagagtgtgcagaagtgaaggtgtgcatttgtcagaagcctgca
actggttccatgcagcagtgtgagctatgtaaagactggttccacagcagttgtatccca
gcagcaaatgttcaagatggggaaatgccctggctgtgtccactctgtttgcgatcagaa
aggccatccttggagacgatcctcctattgctttcatctctggaaagaattcctgtcaga
ctgccagagggagaagcactacactaccttgttgaacgagctatgaactggcaacatcga
gcaaagcagattcttagtacagatgaactctgtttcactctaataaactcgcatttagca
aatcagtcttggcaaggaattacagaacaaatagctgccactgaattggagaaacgtgtt
gcagaaagtagcttgcaggcagattcaggcactgagagtgaatctttcactgcagtttat
aaccgaaacctgtttataaaggaggaggaaatagcacaagccattccttcatggcagatc
tgcattccagtgcaaggactttgtttgtctgatggtgtgagatcacaacttgatgaattg
atgatggaggctctcttactacaactctcattgcctgagatgcagcacatctatcggatc
ttacaagcagctcagtgccctgtggtagaagatgttcaggggcagtcagaattactgcaa
tgtgacccagtagcggtgcagtgtcgcacggaaacctggagctcatgcattgcagagact
gaaggctgctgtctaaagtctgtcaaaaaggatgtgatctctgagaaaaagagacgactt
gacaaagaagctttcatgggtgacaaaaaagaaaaactcaaaaaactaagcaaacccaca
aagaagaatttcaggttaaacctgcaaaaatcaaaaaatccgaatttaggaagaatagaa
actgagaaatattttgaatttctaaggcctaatgaagcattatctgtgataatggagccc
ccctactctgagcctgaggactctgaggatgatgatgcaatctgccctgcagagaactgc
caacaaccagagggtgatgaggtggactgggtccagtgtgatggcagctgcaaccagtgg
ttccaccagatctgtgtaggtgtttcttcagaaactgcagaaaaggacgactatatttgt
gtcagctgtactgtaaatggtcagatcatgcagcagaatggtaacgactag

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