Cucumis melo (muskmelon): 103483787
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Entry
103483787 CDS
T03195
Name
(RefSeq) chromatin structure-remodeling complex protein SYD isoform X1
Organism
cmo
Cucumis melo (muskmelon)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
ResIII
DEAD
DEAD_2
DUF6813
IKKbetaNEMObind
Motif
Other DBs
NCBI-GeneID:
103483787
NCBI-ProteinID:
XP_008438779
UniProt:
A0A1S3AWW0
LinkDB
All DBs
Position
6:complement(4639524..4661643)
Genome browser
AA seq
3309 aa
AA seq
DB search
MAASQNVELEAAKFLHKLIQESRDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMET
VINQHGLDIEALRASRLPLTGGTQMGDSSTAQYAVAGSSSVVGAAKDSKMGISGSEMSKS
SPLASSKPPVGPSSTDHDYYPGSATHRSGQSFDQESPSSLDSRSANSQSQEKHDSVNWDK
QLNDKDGKKGSKKRKKVDTSVVEPPSDNTHQLDTRNSLVNPRNVKTNRVEPPAYLAKGGN
IEQVKHGLTKATEKPIDPQLYSVNRGDGTSTSNEKVLESELPMPSTSSVDATKMIQGTWR
NNAPEMSMLRNSASREAGKLPVSQVPTPSQSRLPFKEQQLKQLRAQCLVFLAFRNGLMPK
KLHLEIALGNNFPKEEGLRKDVDPRGISQSFNEARSSNEGMMPSGKLDAGRETGMVAPGT
VSAGRTFEADSMKEVDNRRVEEKKGTPPDYSVQAEVRKAEAEGMREKTTAQTCLSSGSHP
PDFSGTRGVLTAHNPVEDLENSNLQATAAAGISKPLNPETVGWTGIGSTNEVSRVSLPAF
ASQHELVVDRKNDVSAQLHIVRNNSGLGSQHIDSQSSFSMGERWKPISGTYDQYHAVMPS
RDASVIPNIASHDDMHVPESESRCITEVQKVASIDEGKNGSLNTMEQEDNGKSMPSDLPM
SPKYTMSEKWIMDRQKKKLLNEQNWLLKQQKTEKRIITCFDKLKDTVSSSEDISAKTRSV
IELKKLQLLQLQRRLRNDFLNDFFKPISTEMDRLKSFKKHKHGRRIKQLEKFEQRMKEER
QKRIRERQKEFFGEIEVHKERLDDVFKVKRERWKGFNKYVKEFHKRKERIHREKIDRIQR
EKINLLKINDVEGYLRMVQDAKSDRVKQLLKETEKYLQKLGSKLQEAKSMASDMDDGGAV
NIAEKSESAIENEDEAKHYLESNEKYYMMAHSVKESIAEQPSCLQGGKLREYQMNGLRWL
VSLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGPFLVVVPSSVLPGWESEINFW
APSVLKIVYSGPPEERRRLFKERIVHQKFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDE
GHRIKNASCKLNADLKHYQSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWF
NKPFESNGDNSADQALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCE
ASAYQKLLMRRVEDNLGSIGSTKVRSVHNSVMELRNICNHPYLSQLHAEEVDNLIPKHYL
PPIVRLCGKLEMLDRILPKLKATDHRVLFFSTMTRLLDVMEEYLQWKQYRYLRLDGHTSG
GDRGALIELFNRQNSPYFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHR
IGQKRDVLVLRFETVQTVEEQVRAAAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR
ECKKEEAAPVLDDDALNDLLARSESEIDVFETVDKERQEHEMATWKKLVLGHGISEPVPS
IPSRLVTDDDLKVFYETMKITEEVPKAGEASHAGVKRKSEYLGSLDTQHYGRGKRAREVR
SYEEQWTEEEFEKMCKVDSPESPRPKDAVAGEPSASVSGSVEATVLKKEEHASSPLPPVQ
PLAPVQPMPQHQTPPSKRGRGRPKRSTVDKLPAPVVPPPSLSITAKTETGLQGETISSIS
KTGCLDSLPGQGITGQIASGTAPNSQLTTPVPSIIPASESAPACSPAPIQAKHGRKTQTG
QEAPRRRGKKQGIVPPPVPCSLSSDLRQDDPSQGKLTNPVAGQVNVASDVGSNASPTQPP
TSFPGSASSKPITGPNDQPAIGVSSNLEPSAAMPSVSSISQIAPNLIPKPVQPRGPYRKT
QNAAGAPRRRGKKQAGATPALPNTMAAASLSSNINLQKNHMDSSSSKAVVVSPKENIVNQ
ATNIISEQLHRITGQGLESSKSTDNSNQGKETVSLSTCVSTVGSQVSTEQSQNTEHLSKS
TGAAQDATISNNIVDETLKSHSLQDTPAVPVCGPPTTSLSSSVTVEMSPKPVIDVAPETA
PSSQPIHSLPSVASTLQLPSQSPPPGFVQPKRQGRKTPRSREEPPRRRGRKPASLASVVP
DGGSVSKEAKDLNVHVQPTQMGDSGSKDTCLKGKTGTENLESTSVQHVAGVTQIVDTHSL
GPKRKEQAPKTAQQKQLLASSTKSDATGTLDRTTISGRYQTANVNDVARVMKEVFSGTGL
SKAKVGESSGKESKDAPAMPVLSKSSVEVIRNNQSEATLATILNSNIPVGAHELESSVRA
SEVRPGSANASEECIIPKIDEENKLVESKETSAACSIVASGSGISSNINNADHNPPEGST
ISSSLIDCNSSKTLKMTDDALKNETKPVSGGLLKSSPDRSSYEVPPSLNNDGESHPAPTL
PVASDSSHTNRITAPCTNQENNGCQSLSGHHENLDHSGITRFDESSDALMSGAELDVQEH
LSVATMNIECKNDEVNDVAPVLEQMGPASKQDVDIVMGKSSGSVDHSDTGASDMVKEASG
NKLELASEEMPNLPSSDDGSAQVQEVSAGSPDDSDIAKSNRGSLEVDLVPPRVDAAECSI
KTDVEEQKARELNTSSKCILEENLNVPEKEEKVLEDNAEFGEPKDVSEPIAPTQDNEHNK
GDNDGACLMDVDVSRNDDLDESDAGGLIPADTSPSTSVRPNESKSSDAIVQMDVSDGEHV
PEDTKATEVLGSSSLQEGVENCSFTSVVDQVDSLGKLEEPKNIGVSANLQVIVSQDDVIS
ENLVREDSNDTSITPQEGKIEGSGEINRGSPSEERQSDPQAEEVLVDRIEEDKSGNLAQP
LSSTEVKETNMMVLPTSLDNSGDQTDLPDSSSTMTGRENIENSCKDDLQDCTVTDSIKTL
QDSRELPEEVSQVSAALAPTNSNDSPQMDPLSSSVSLERPRDNPMSSDHMVATHDNIVLS
ENVSSVSLITEENKCQSSSEKSLSDSAEPLENCKDSDNSSDRLVVTQVNKERLLSITENL
ISVDSSDHMEVSAGDQINVPQTEESVPGNPVDFLNQPPPSTSTMEEDKTETSFDSGLIAA
PPLLRDVLQTETEPMDSSQPGGILEDVSGETILPSSSVLEEVGEPPLDKAATKLGSPSSL
PAENESMERSPVSSPADNVIAVVETVVCDEADVPTENERCPLTDGVGDSKMAICNEADVP
PVSDTVQGPANSFTSVELTIHDQVDVPPVSDSANAPNDTSTICDQADATPASELKQDPVD
SATLACDHADVPTVSDSLPENKSPNLDLPSGSPPVKDETTVETRERSLEETPVNQSSVES
ETEDPKQSE
NT seq
9930 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttcacaaaatgttgagttggaagcagcgaaatttctgcacaaacttattcaa
gaatctagagacgagccagcaaaattggctacgaaactttatgtgatactgcaacacatg
aaatcaagtgggaaagagcattcgatgccatatcaagtaatttcgagggccatggaaact
gtcatcaatcaacatggtcttgatattgaagctttgagggcatcacgccttcctttgact
ggtggaactcagatgggcgattcttcgactgcacagtatgcagttgcaggttcttccagc
gttgttggtgctgctaaagattccaaaatgggtatatctggaagtgagatgtccaaaagt
agcccactggcttcaagcaagccgcctgttggcccaagtagtacagatcacgattattat
ccaggttctgcaactcatcggagtggtcaatcttttgatcaagaaagtccatctagtttg
gattcaaggtctgccaattcacagtcacaagagaagcatgattcagtgaattgggacaag
caattgaatgataaggatggtaaaaagggcagcaagaagaggaagaaggtggatacatca
gttgtggagccacctagcgacaatactcatcaacttgatacacgcaactcattggttaat
cctaggaatgtaaagacgaacagggtcgaaccaccggcatatctagctaaaggagggaat
atcgagcaggtaaagcatggattgaccaaagctacagaaaagcctattgaccctcaattg
tattctgtaaaccgtggtgatgggacatctacctccaatgaaaaagttttggagagtgaa
ctacccatgcctagcacatcatcagttgatgctacgaaaatgatccaaggtacatggcgg
aacaatgcaccagaaatgagtatgttgcgcaactcagcttctagagaagcaggaaagctt
cctgtttctcaggttcctaccccatcccaatcacgtttgcctttcaaggaacaacaattg
aaacaacttagggcgcagtgccttgtgtttttagcattcagaaatggtttgatgccaaag
aaactgcaccttgaaattgccctggggaataattttcctaaagaagaggggcttcgcaaa
gatgttgatcctagaggtatttctcaatcttttaacgaggccagaagttccaatgaaggc
atgatgccatctggaaaattggatgctggaagggaaacaggtatggtggccccaggcacg
gtatctgctggaagaacctttgaagctgattccatgaaagaagtagataataggagagtg
gaggaaaaaaagggcacacctcctgactattctgttcaagcagaagtaagaaaggcagag
gctgaaggcatgcgggaaaaaacaactgctcaaacatgcctgagctctggatcacatccg
cctgacttttcaggtacaaggggggttttaactgcacataatcctgttgaggatttggag
aatagcaatcttcaagccactgctgcagcgggtataagcaagccattgaaccctgaaaca
gttggctggacaggaattggaagcacaaatgaggtttctagggtcagtctaccagcattt
gctagtcagcatgagctggtagttgataggaagaatgatgtatctgctcagttgcacatt
gttcggaacaatagtggattagggagtcaacatattgatagtcagtcttctttttcaatg
ggagaacggtggaagcctatctctgggacatatgatcagtaccatgctgtcatgccctcc
agagatgctagtgtgatcccaaatattgcatctcatgatgatatgcatgtgccagaatct
gaatccagatgcatcacagaagtgcaaaaagtggcatctattgatgaagggaaaaatggc
agcctaaatactatggaacaagaagacaatggtaagtcaatgccatctgatttgccgatg
tctccaaagtacaccatgtcagagaaatggataatggatcggcagaaaaagaaactccta
aatgagcaaaattggttactgaaacaacaaaaaactgagaaacgtattatcacctgtttt
gataagttaaaggatactgtcagctcatcagaagatatatctgcaaaaactagaagtgtt
atagaattgaaaaagcttcaactcttgcagcttcagcgccggctcaggaatgattttctc
aatgatttcttcaaaccaatttcaactgagatggaccgattgaaatctttcaagaagcat
aaacatggtaggaggattaaacaacttgaaaaatttgagcagagaatgaaggaggagagg
caaaagagaattcgggagaggcaaaaggaattctttggtgagatagaagttcacaaggaa
agactcgatgacgtatttaaagttaagagagagaggtggaagggtttcaataagtatgtc
aaggagttccacaaaaggaaggaacgaattcatcgtgagaagattgacagaatccagcga
gagaagatcaatcttttgaagattaatgatgtagaggggtatcttcgaatggtgcaggat
gcaaaatcagatcgtgttaagcaacttctcaaggagactgaaaaatatcttcagaagctt
ggatccaagcttcaagaggcaaagtccatggcaagcgatatggatgatggaggagctgtg
aatattgctgaaaagagtgaatctgcgattgaaaatgaagatgaggcaaagcattattta
gaaagtaacgagaagtactacatgatggctcatagtgttaaggaaagcatagccgagcag
ccttcttgtcttcagggaggaaagttgagggagtatcagatgaatgggcttcggtggctt
gtttctctgtataacaaccatttgaatggaattcttgccgatgaaatggggcttggaaaa
actgttcaggtaatttccctaatctgttatttgatggagactaaaaatgatcgaggtccc
tttttggtggttgtgccatcatcagttttacccggatgggagtcagagatcaacttctgg
gcccctagtgtgcttaaaattgtgtattctgggcctccagaagagcggcgtagattattc
aaagagagaattgttcatcagaaatttaatgtactactgaccacgtacgaatatctgatg
aacaagcatgataggccaaaactgagcaagattcattggcactatatcataattgatgaa
ggccaccgcataaagaatgcttcctgcaaattgaatgctgatctaaagcactatcagagt
tctcacagattactcttgactggaacaccactacagaacaaccttgaagagctgtgggca
ttactgaactttttgttgccaaatatttttaattcatcagaggatttttcacagtggttc
aacaaaccatttgagagtaatggtgataattcagctgaccaagccttgctttctgaagag
gaaaatcttttgatcataaatcgactgcaccaagtgcttcgcccgtttgttcttcggagg
cttaaacacaaggtggaaaatgaactgccagaaaagattgaaagacttgtaagatgcgag
gcttctgcatatcagaagcttttgatgaggagagtagaggataaccttggttcaatagga
agtacaaaggtccgctcagtgcataattcagtgatggagctgcgtaatatttgcaatcat
ccttatctaagccaacttcatgcagaggaggttgataatttgatacctaagcattacctg
ccacccattgttagactctgtgggaagctggagatgttagatagaatattaccaaagcta
aaagcaactgatcatcgggttctcttcttttccaccatgactagactgctagatgttatg
gaggaatatcttcagtggaaacaatatcgatatctacgattggatggacatacgtctggg
ggtgatcgtggtgcactaattgagttatttaaccggcaaaattctccctactttatattc
cttcttagcattcgagctggtggtgtgggagtgaatctccaagctgctgatacagtgatt
atcttcgacacagactggaatccacaggttgatctacaagcacaggctagggctcataga
attgggcagaagagggacgtgcttgttcttagatttgaaacagttcaaacggtggaagaa
caagtgagagctgctgcggagcataaactaggagtggctaaccaaagtattacagctggt
ttttttgataacaatacaagtgctgaagatcgaagagaatatttggaatctcttctacgt
gagtgtaagaaagaagaagctgcacctgtactagatgatgatgctctgaatgatctccta
gcacgcagtgagtcagagatagacgtgtttgaaacagttgacaaagaacggcaagagcat
gagatggccacatggaagaagctggtacttggccatggaatttctgagcctgttccttcc
atcccttctcgtcttgtaacagatgatgacctgaaagtattctacgaaacaatgaagata
actgaagaagtaccaaaagctggggaggcttcccatgcaggggtgaagaggaagagtgaa
tatcttggaagccttgacacccaacattatgggagggggaagcgggcaagagaggtgcga
tcctatgaggaacagtggacagaagaggaattcgaaaagatgtgcaaggttgactcacct
gaatcccctaggccaaaggacgctgtggcaggagaaccatcagctagtgttagtggatca
gttgaagcaactgttttgaagaaagaagaacatgcttcctctcctctgcctcctgttcag
cctttggctcctgttcagcctatgccccagcatcaaacaccaccttcgaagcgaggtcgt
ggaagaccaaaaagatcaactgttgataagctgcctgctcctgtggttcctcctccatct
ctttctataacagccaaaacggaaacggggttacaaggggaaactatttcaagcatttct
aaaactggctgtcttgattctttgcctggtcaaggaataactggtcaaattgcttcgggg
actgctccaaattctcagttaactaccccagtgcctagtattattcctgcctctgaatca
gctccagcttgctcccctgcaccaattcaagcgaaacacggtcgaaaaactcaaactgga
caagaagctcctcggagaagggggaaaaaacaggggatagtaccgcctcctgttccttgc
agtctatcctctgatttaagacaagatgacccatcacagggtaaattgacaaatccagtg
gcaggtcaagttaatgttgcaagcgatgttggttctaatgcttctcccacccagcctccc
acttctttccctggttctgcctcttcaaaacctatcactggacctaatgatcaacctgcc
attggggtttcatcaaatttggaacctagtgctgctatgccttctgtgtcttctatatct
caaattgcccctaatttgattcctaaacctgtacagcccagaggaccatatcggaagact
caaaatgctgctggagcgccacgacgtagaggaaagaaacaggcaggagcaactcctgca
ttacctaacaccatggctgctgctagtctaagctcaaatatcaatttgcaaaagaaccat
atggattcttcttcaagtaaggctgttgttgtcagtcctaaagaaaatatcgtcaatcag
gcaaccaatattatctctgagcaattgcatcgaatcactggacagggtttggaatcttct
aaatcaacagataattccaatcagggcaaggagacagtgagcttgtcaacgtgtgttagt
actgtgggatcacaagtgtctacagaacaaagtcaaaataccgaacacttgagtaagagt
actggtgctgcccaggatgcaactatatcaaataacattgtggatgagactttgaagagc
catagtttacaagacacacctgcagttccagtatgtggtcctccaaccacctctttatct
agttctgttactgtggagatgagtcccaaacctgttatagatgttgctccagagactgct
cctagttcccagcccatccattcattaccgtcagtggcttcaaccttgcaacttccctct
caatctccaccacccggatttgtgcagcctaaacggcaaggtcgtaagactcctagaagc
agggaagagccccctcgacgtaggggaagaaaaccggcctcattggcctctgtagtccct
gatggtggttcagttagcaaggaagctaaagatttgaatgtgcatgtgcaacctacgcaa
atgggggattcaggtagtaaagacacttgcctaaaaggtaaaactgggactgagaatcta
gaatcaaccagtgttcaacatgtcgctggtgtgacccaaattgtagatactcattccctg
ggtccaaaaagaaaggagcaagcacccaaaactgctcaacagaaacaattgttggcatca
tcaacaaaaagtgatgctactggaaccttggacaggaccactatatcaggccgttatcaa
actgcaaacgtgaatgatgttgctcgagtaatgaaggaggtcttctctggaactggcttg
tcaaaagccaaagtcggagagtcttctgggaaagaaagcaaggatgcccctgcaatgcct
gttttgagcaagtcgtctgtggaggtgatcagaaataatcagtcagaggctactttagcc
accattttaaattccaacattccagttggggctcatgaactagaatcttcagttagagct
agtgaagtaagaccaggttctgcaaatgcttcagaagaatgtatcattccaaagatcgat
gaggaaaataaattggttgaatcaaaagaaacgtctgctgcatgctcaattgtggctagt
ggctctggaatttcatcaaatatcaacaatgctgaccataatccaccagaaggctcaact
atttcctcaagtctgattgattgtaattcatcaaagactcttaagatgacagatgatgca
ttgaaaaacgaaacaaaacctgttagtgggggactcttaaaatcttctcctgatagaagc
agctatgaagttcccccatctttgaataatgatggtgaaagtcaccctgctcctacattg
cctgttgcttctgatagcagtcatacaaataggataacagccccttgtacgaatcaggag
aataatggctgtcaaagtctctcaggtcatcacgaaaatcttgatcattcaggtattaca
aggtttgatgagagttcggatgcactcatgtcaggtgctgaacttgatgttcaagaacat
ctttctgtagctacaatgaatattgagtgtaagaatgacgaagtgaatgatgtcgcccct
gttcttgaacaaatgggtcctgcctcaaagcaggatgttgacattgtgatggggaagtct
agtggcagcgtagatcattctgacacgggtgcatctgatatggtgaaggaagcatcggga
aataaattagagcttgcttcagaagagatgccgaatcttccttcatctgatgatggaagt
gctcaagtccaagaagtttctgctggaagtcctgatgattcagatatagctaaatccaat
agaggttctctggaggttgatctggtaccccctagagttgacgctgcagaatgctctatc
aaaactgatgttgaagaacagaaagcacgagagttaaataccagtagtaagtgcatcttg
gaggaaaatttaaatgttccagaaaaggaagaaaaagtattggaagacaatgctgaattt
ggtgagcctaaagatgtttctgagccaattgctccgacccaggataatgaacacaataag
ggtgacaacgatggtgcatgtctcatggatgtggacgtctccaggaatgatgatttagat
gaatcagatgctggtggactcatccctgctgatacttcaccttcaacgtcagtcagacca
aatgaatctaaaagttctgatgcaattgttcaaatggacgtttctgatggagaacatgtg
ccagaagatacaaaggctaccgaggttctggggtcatcttcattgcaggaaggggtagaa
aattgttctttcacgtctgtggtagatcaagttgatagtttagggaagttggaggaaccc
aaaaatattggagttagtgctaatcttcaagtgattgtgtctcaggatgatgtgatttca
gaaaaccttgtgcgagaggattcaaacgatacatccattacgccacaggaagggaagatt
gagggatctggtgagataaatcgagggtctcctagtgaggaaaggcaatctgatcctcaa
gctgaagaggttcttgttgatcgaatcgaagaagataaatcaggaaatttggcccaacca
ctttcttcgacagaagttaaggagacaaatatgatggtgttacccacaagtttagataat
tcaggtgatcaaactgatttacctgattcctcatccacgatgacaggcagagaaaatatt
gagaattcttgcaaggatgatttgcaggattgcacagtcacggattcaataaaaactctc
caggatagtagagaattacctgaagaggtatcacaagtttcggctgcgcttgctccaacc
aacagcaatgactcgcctcaaatggatccccttagctcctcagtctctctggagcgacca
cgtgataatccaatgagtagtgaccatatggttgcaacacatgataacattgttttgtct
gaaaatgtgtcatctgtttcattaattactgaagaaaacaagtgtcaaagttcctctgag
aaatccctatctgatagtgcagaaccgttggagaattgtaaagattctgataatagcagc
gacagattggttgttactcaagtcaacaaggaacggcttttaagcatcaccgaaaacctc
atctctgtggattcttccgaccatatggaagtttccgctggtgatcagattaatgttcct
caaactgaggagtctgttcctggaaatccagttgatttcttaaaccagcccccaccttct
acaagtactatggaagaagataagaccgaaacctcatttgatagtggactaattgctgcc
cccccgctgctgagagatgttttgcagactgaaacagaacccatggactcttctcaacct
ggtgggattttagaagatgtatcaggagaaacaattttgccttcatcttctgtgttggag
gaggtgggggagcctcctctagacaaggctgcaacaaaactaggcagtccatcctctcta
cctgctgaaaatgaaagcatggaacgctcaccagtttcaagtccggctgataatgtcatt
gcagttgtagaaacagttgtatgtgatgaagctgatgtacccacagaaaatgaaaggtgc
ccactgacagatggtgtcggagattcaaaaatggccatatgcaacgaagctgatgttcca
ccagtcagtgacacggtgcagggtccggccaatagtttcacttcagtagaattaaccata
catgatcaagttgatgttcctccagttagcgactcggcaaatgctccaaatgatacctct
accatatgtgatcaagctgatgcaactccagcttccgagttaaaacaggatccagttgat
agtgccaccctggcatgtgatcatgcggatgttcctacagtttctgactcactgccagaa
aataagtctccaaacttggacctgccttctggatctccaccagtgaaggatgaaaccact
gtcgagacccgggagcggtcactggaggaaactccagttaaccaaagttcagttgaatcc
gaaacagaggatccaaagcaaagtgaatga
DBGET
integrated database retrieval system
