Cucumis melo (muskmelon): 103503033 Help Entry 103503033         CDS       T03195                                  Name (RefSeq) DNA ligase 1 isoform X1   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism cmo  Cucumis melo (muskmelon) Pathway cmo03030   DNA replication cmo03410   Base excision repair cmo03420   Nucleotide excision repair cmo03430   Mismatch repair Brite KEGG Orthology (KO) [BR:cmo00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     103503033    03410 Base excision repair     103503033    03420 Nucleotide excision repair     103503033    03430 Mismatch repair     103503033  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:cmo03032]     103503033    03400 DNA repair and recombination proteins [BR:cmo03400]     103503033 Enzymes [BR:cmo01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      103503033     6.5.1.6  DNA ligase (ATP or NAD+)      103503033     6.5.1.7  DNA ligase (ATP, ADP or GTP)      103503033 DNA replication proteins [BR:cmo03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     103503033  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      103503033 DNA repair and recombination proteins [BR:cmo03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      103503033    NER (nucleotide excision repair)     Other NER factors      103503033    MMR (mismatch excision repair)     Other MMR factors      103503033 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase Motif Other DBs NCBI-GeneID:  103503033 NCBI-ProteinID:  XP_008465403 UniProt:  A0A1S3CNQ9 LinkDB All DBs Position 11:complement(28422741..28430228) Genome browser AA seq 801 aa AA seqDB search MLSLRSCFYLRPITLPHPQFKKLIFSNNPSFSFKPISQNLVSPMSSRPSAFDALMSGARA AAKKKPANSSPKKRKALDSLDPPLKPSSVLALESTPPVESQCGSSIPNLDDHGGTHLDVV DLGETKLGQDNGGGVGAKIGPFGNKTCASSVQERTAKLKSSIAELKKKAKDFNSKNVACW KEGERVPFLFLCLGFDMISEESSRITITDIVCNMLRTVMDTTPDDLVATVYLLANKIAPA HEGLELGIGDASIIKALSEAFGRTEAQVKKQYKELGDLGLVAKASRSSQSMMRKPDALTI AKVFDTFRLIAKESGKDSQEKKKNHIKSLLVAATDCEPLYLIRLLQTKLRIGLAEQTLLA ALGQAAVYAEKHSTPPPNIQSPLEEASKIVKQVFSILPVYDKLVPALLSGGVWNLSKACN FTPGIPIGPMLAKPTKGVSEILNKFQGLEFTCEYKYDGERAQIHYMEDGSVEIYSRNAER NTGKFPDVVLTVSRIKKPSVRSFILDCELVAYDRGKQKILPFQILSTRARKNVAVSDIKV EVCVFAFDLLYLDGQPLIQRELNARRELLYDSFIEESGYFQFATAIITNDLEEIQKFLDA SVDQSCEGLIIKTLNRDATYEPSKRSHNWLKLKKDYIDSIGDSLDLVPIAAFHGRGKRTG VYGAFLLACYDNDNEEFQSICKIGTGFSEAMLEERSASLRSKVIPQPKSYYRYGDAINPD VWFEPTEVWEVKAADLTISPVYRAGVGIVDSDKGISLRFPRLVRVRKDKNPEEASSSEQV ADMYNAQKHNHQNNQDDNEDD NT seq 2406 nt NT seq  +upstreamnt  +downstreamnt atgctttctctgcgttcatgtttctatctacgccccatcacattgcctcatccccaattc aagaaactcattttctccaacaatccttccttctctttcaaacccatatctcagaatttg gtttcaccaatgtcttctcgtccttccgccttcgatgctcttatgtctggtgctcgtgcc gctgccaagaagaagcctgctaattcttctcccaagaagcgtaaagcccttgattcatta gatcctcctctgaaacctagctctgtccttgctcttgagtcaacgccgcctgttgaatcg cagtgcggcagttcaattccaaatttggacgatcatggaggtactcatttggatgttgtc gatttgggagaaacgaagctgggtcaggataatggtggcggtgttggagccaagattggg ccgtttgggaacaagacttgtgcgtctagtgttcaagaaagaacagcgaaattgaagagc tctattgcagaattgaaaaagaaggctaaggatttcaactcgaagaatgttgcttgttgg aaagagggtgaacgtgttccttttttgtttctttgtttgggtttcgatatgatttcggag gagtccagtaggattactatcaccgatatagtctgcaacatgctgaggaccgtcatggat actacacccgacgacttggtagccactgtgtatcttttggcgaataagattgctccagct catgaagggcttgagttggggattggggatgcttctattatcaaagctctttctgaggca tttgggaggacagaggcacaggtcaaaaaacagtacaaggaattgggagatttgggtctt gttgctaaagcaagccgttcatctcaatctatgatgcgaaagcccgatgctttaactatt gccaaagtatttgacacatttcgactgattgctaaggaatctggcaaggatagtcaggag aagaaaaagaatcatatcaagtcactgcttgttgctgccactgactgtgaacctttatat ctgattagattgctgcagacaaaattgcgaattggacttgctgagcagactcttttagct gcattaggacaagcagctgtatatgctgaaaagcactcaacaccacctccgaatattcaa tcccctctagaagaggcttctaagattgtaaagcaggtgttttctatacttccagtttat gacaaacttgtccctgctcttcttagtggtggtgtgtggaatctttcaaaagcatgcaac tttacaccgggaattccaattggacccatgctggcaaaaccaacaaaaggagtgtctgag atcttaaataaattccagggtttggaatttacttgtgaatacaaatacgatggggaacgt gcccagatacattacatggaagatggttcagttgagatatacagtcgaaatgctgaacgg aacactgggaagttccctgatgttgttctaacagtatcaaggataaagaaaccatctgta agatcatttatcttggattgtgaacttgttgcttatgatcgtggaaaacaaaagattcta ccttttcagattctgagtactcgagctcgtaagaatgtggccgtgagtgatattaaggtt gaagtgtgtgtatttgcttttgatttactctatcttgatggtcaaccacttatccagaga gaacttaatgcgcgtcgagagcttctctacgattcatttattgaagaatctggatatttt caatttgccacagcaataataacaaatgatctcgaggaaatacaaaagttccttgatgca tcggttgatcaaagctgtgagggtttaatcatcaaaacactgaaccgggatgccacttat gagccttccaagaggtctcataactggctaaaactgaagaaggattacattgacagcata ggggattcacttgatttggtaccaattgctgctttccatggccgtgggaaacgtacaggt gtctatggtgcatttctccttgcctgttatgataatgacaatgaagaatttcaaagtatt tgtaagataggaactggtttttctgaagcaatgcttgaggaacgttctgctagtctccgt tctaaagtcatccctcaaccaaagtcgtattatcggtatggggatgcaatcaatccagat gtttggtttgagccaactgaggtttgggaggttaaagcagcagacttgactattagccca gtttatcgtgcaggagtcggcattgtggactctgacaagggaatttctctccgatttcca cgtcttgttcgtgtgaggaaagacaaaaatccagaggaagcctcatcatcagagcaggtt gccgacatgtataatgctcagaaacacaaccaccagaacaatcaagatgacaatgaagac gactaa

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