Cucurbita moschata (crookneck pumpkin): 111431317
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Entry
111431317 CDS
T05248
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 51-like
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmos03041
]
111431317
03009 Ribosome biogenesis [BR:
cmos03009
]
111431317
Enzymes [BR:
cmos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111431317
Spliceosome [BR:
cmos03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
111431317
Ribosome biogenesis [BR:
cmos03009
]
Eukaryotic type
90S particles
Helicases
111431317
Pre-60S particles
111431317
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
SecA_DEAD
AAA_22
Motif
Other DBs
NCBI-GeneID:
111431317
NCBI-ProteinID:
XP_022923675
UniProt:
A0A6J1ECJ3
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MVVLDENVPSSSEAVAMNKRRKRKRTKKNIPSTGAEESELQNPMEGEEEEEGDAEGNVPE
EKVKEEEKKNKKRKSKMKKGELEEGHENTSDGERKDGVEGEVEKDKEKKKVKTDGSGIMS
TVSFDSLELSEKTLRAIKDMGFEHMTQIQARAIPPFLVGKDVLGAARTGSGKTLAFLIPA
VELLHHICFTPRNGAGVVVICPTRELAMQTHEVAKELLKYHSQTLGLVTGGSSRQAEADR
ITKGVNLLVATPGRLLDHLQHTKNFVFKNLKCLVIDEADRILETNFEEEMKQIIKLLPKN
RQTALFSATQTQKVEDLVRLSFQSTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFIVLY
SFLKRTLSKKVMVFFSSCNSVKFHADLLRYIKVDCMDIHGKQKQQKRTSTFFAFNKAETG
ILLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGEGSKGNALLFLIPEELQF
LSYLKAAKVPVKEYEFSDKKLANVQSHLEKLVGSNYYLNQSAKDAYRSYLLAYNSHSMKD
IFNVHRLDLQGIAASFCFSNPPKVNLNIDSSASKFRKKTRKVDGSRNRFSESNPYGRNNA
ADDERQFVRY
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggtggtactggacgagaatgttccatcctcatcagaggcagtggcaatgaacaaaagg
cgcaaaaggaagagaacgaagaaaaatattccttcaacaggtgcggaagaatcagaactt
caaaacccaatggaaggtgaagaagaagaggaaggagatgcggaaggtaatgtaccagag
gagaaagtgaaagaagaggagaagaagaataagaagaggaagtcaaaaatgaagaagggc
gagttggaggagggacatgaaaataccagtgatggcgagagaaaggatggtgttgaaggg
gaagtggagaaggacaaggagaaaaagaaggttaagactgatggatcgggaattatgagt
accgtttcatttgattcgcttgagttgtcggagaaaactctccgagcgattaaggacatg
ggatttgagcatatgactcagattcaagctagagcaattccaccttttctggttggcaaa
gatgttcttggagccgcaaggactggatctgggaaaacccttgcctttcttatacctgct
gtggagctgctacatcacatatgctttactcctcgtaatggagctggtgttgtcgttatt
tgcccaacaagggagcttgcaatgcagacacatgaagtggcaaaagagcttctcaaatat
cattcacagacacttggccttgttaccggtggttctagcagacaagccgaggctgatcgt
attacaaagggggtcaatctattagtagcaacccctggtcgacttcttgaccatcttcag
catacaaagaattttgtatttaaaaatttgaagtgccttgtaattgatgaagccgacagg
atattggaaaccaattttgaggaggaaatgaaacaaattataaagctcctcccaaagaat
aggcagactgctttgttctcagcaacccaaacacaaaaggttgaggatcttgtccgcttg
tcgtttcagtcaactcctgtttatattgatgtggatgatgggagaacaaaggtcacaaat
gaagggttgcaacaaggttattgtgttgtgcccagtgctaaaagattcattgttctatat
tccttcttaaagagaactttatctaagaaagttatggtcttcttctcatcttgtaactct
gtcaaatttcacgcggaccttcttagatacattaaggttgattgcatggatattcatgga
aagcaaaaacagcagaagagaacttctaccttctttgccttcaataaggctgagacaggg
atcctactatgtactgatgttgctgcacgtggacttgacatccctgctgttgattggatt
gtgcagtacgatcctccagatgaacctaaggaatatattcacagagttggtcgaacagct
cgaggcgaaggtagcaaaggaaatgcactacttttcttgattcctgaagagcttcaattt
cttagctatctaaaggcagcaaaagttcctgtcaaagagtacgagttcagcgataaaaaa
ctggccaacgtgcagtctcatctggagaagctggtcggcagtaattattatttgaaccag
tcggctaaggatgcttacagatcctatttattagcttacaattcacactctatgaaagat
atcttcaatgtccaccgccttgacctgcagggtattgctgcttcattctgcttttccaac
cctccaaaggtcaaccttaacatcgacagtagtgcctcaaaattcaggaagaaaacgcgt
aaagtagatgggagcaggaaccgattcagtgagagcaatccttatgggagaaacaatgcg
gcggatgatgagagacaatttgtaagatactag
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