Cucurbita moschata (crookneck pumpkin): 111431475
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Entry
111431475 CDS
T05248
Name
(RefSeq) transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111431475
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cmos01002
]
111431475
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmos03021
]
111431475
03036 Chromosome and associated proteins [BR:
cmos03036
]
111431475
Peptidases and inhibitors [BR:
cmos01002
]
Metallo peptidases
Family M1
111431475
Transcription machinery [BR:
cmos03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111431475
Coactivators
SAGA/TFTC/STAGA complex
111431475
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
111431475
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M1
HEAT_2
Peptidase_M1_N
DUF6842
Motif
Other DBs
NCBI-GeneID:
111431475
NCBI-ProteinID:
XP_022923890
UniProt:
A0A6J1ED82
LinkDB
All DBs
Position
Unknown
AA seq
1360 aa
AA seq
DB search
MAKPRKPKNTDDAKPPDNSGAVVRHQKLCLSIDIDKRRVYGFTELEIAVPDIGIVGLHAE
NLGIVSVSVDGDPTEFEYYPRTQHVESEKSFKAVSSPSSAADAAGSIYLSSIEKELVPNL
LINCCKAFKNGSEKQDQPFLENGVQPAVEDKQNIRLVRIDYWVEKSDVGIHFNDHIAHTD
NQIRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGILLYQVLSKENPPCKTYVYRVD
IPVNAHWISLAVGPFEILADHQNGFISHMCSPVNSLKLKHTVEFFHSAFSCYKDYLSVDF
PFGSYKQIFIEPEIAVSSACLGVSMCIFSSHFLFDEKIIDQTIDTRIKLAYALARQWFGI
YITPEAPNDEWLLDGLAGFLTDLFIKKNLGNNEARYQRYKANCAVCRADDSGITTLSSSS
ACKDLYGIQRIGIYGKIRSWKSVAILQMLEKQMGPESFRKILQNIVSRAKDTTSTSQSLS
TKEFRHLANKIGNLERPFLKEFIPRWVESCGCPLLRMGFSYNKRKNMVEMAVSRECTVTP
ATILENRDSDTGWPGMMSIRIYELDGVFDHPVLPMTGESWQLLEIQCHSKLAARRLQKTK
KGSKPDGSDDNADIPALDVRSSVESPLLWLRADPEMEYLAEIQFHQPVQMWINQLEKDKD
VIAQAQAIATLEMLPQPSFSVVNALNNFLRDPKAFWRVRIEAALAMAKTASEDTDWAGLL
NLIKFFKSQRFDADTGLPKPNEFRDFPEYFVLEAIPHAVAMVRATDQKSPREAVEFVLQL
LKYNDNNGNPYSDVFWLAALVQSVGELEFGQQSILFLASLLKRIDRLLQFDRLMPSYNGI
LTISCIRTLTQIALKLSGLLSLDRIIELIRPFRNFNSTWQVRIEATRALLDLEYHCNGID
AVLLLFIKYLEEEKSLRGQVKLGVHVMRLCQIMRRSDSNDSVNNDTLVALLLLLEGHMAF
NNVCLRHYLFCILQVLAGRPPTLYGVPREYKTLHMGDSGTCSEQKRVLTSLIPEFNPPEP
SSVSAVAPVPCIPVTLSSEPLHTPKPRPDSLAIPEVSKEGAAVVEVPKQATAIAEAPREA
ASVSNSHERKLPVVKIKVRSSAATSRADADNQTTERSHAAPRETDVGPSSSVSVDAPQRN
IAEATSISNHILEEVNSCHDHGSHMTASIGSAKPASYGDDLGKEFQCTADSSRAFGHFQP
EDPSSSSIIQDNNIDADAQKYASLQTLSLPQHDHGLASLHSRHGKKEKKKDKEKKRKRDS
HKEHRNDPEYIERKRLKKEKKQKEKEMAKLLNEEVKPLPIAMPRMKEPPTKSTPVQLESN
EPSGSRLIVGVNSKPEASEGTASAAPKLRIKFKNRTLNNS
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcctcgcaagcccaagaacaccgacgacgcgaagccacctgacaactccgga
gctgtagttcgtcaccagaagctttgtctctccatcgacattgacaagcgtcgcgtttat
gggttcaccgagttggaaatcgcggttcctgatattggcatagttgggttgcacgcggag
aaccttgggattgtgagtgtttcagtggatggcgaccctactgaattcgagtattatccg
cggactcaacatgtggaaagtgagaagagttttaaagcagtgtcgtcgcctagctctgct
gcagatgctgcggggtcgatttatttatcttcaatcgagaaagaactggttcctaatttg
ttgataaactgctgcaaggctttcaagaatggaagtgagaagcaagaccagccatttctg
gagaatggagtgcaaccagcagtcgaggacaagcagaatataaggctggttcgtattgat
tactgggtagagaaatcagatgtaggtattcacttcaatgatcatattgctcacacggac
aaccaaataaggcgtgcaaggtgctggttcccttgtatggatgatggcctacaacgatgc
aagtatgacctcgagtttactgtctctcaaaatcttgtggctgtcagtaatggaattctg
ttgtaccaggtcttgagcaaggagaatcctccctgcaaaacttatgtttatcgtgtagac
atccccgtcaatgcacattggatatcacttgccgttggaccatttgaaatccttgctgat
caccaaaatggatttatatcacacatgtgctcgccagttaattctttaaagctcaagcat
acagtggagttttttcatagtgcattcagctgctataaggattacctctccgtggacttc
ccatttgggtcatacaaacaaatcttcatagagccagagattgcagtatcatcagcatgt
ttgggagtttccatgtgtatatttagttctcattttttgtttgacgagaaaatcattgat
cagaccatagatacaaggattaaacttgcttatgctcttgcaaggcagtggtttggtatt
tatattacgcctgaagccccaaatgacgagtggttgttggatggtcttgctggttttttg
actgatttattcatcaagaagaacttaggaaataatgaggcacgctaccagcggtacaag
gcaaattgtgctgtttgtagagcagatgatagtggtataaccaccttgagttcctcttct
gcttgtaaagatttgtatgggatccaacgcattggtatatatggaaaaataagatcatgg
aagtctgtggcaatccttcaaatgttggagaagcagatggggcctgagtctttccgcaag
attctgcaaaatattgtttctcgtgctaaggatacaacctctacatcacaatcacttagc
acaaaagagtttcgtcacttggccaataagattggaaaccttgagcggccatttcttaaa
gagttcattcctcggtgggttgaatcatgtggttgtccactgctgaggatgggattttcc
tacaacaaacggaaaaatatggttgaaatggcagtgtcgcgggaatgcacagtaacacca
gccacaattttagagaatcgggacagtgatactggatggcctggcatgatgagtatcagg
atttatgaacttgatggcgtgtttgatcatccagttctcccaatgactggtgagtcgtgg
cagctactagaaatacaatgccactccaaacttgctgctagacgcctccagaaaactaaa
aaggggtcaaaacctgatggttctgatgacaatgctgatatacctgcgcttgatgtccgc
tctagtgtggaatctcctttgttatggttgcgagcggaccccgagatggaataccttgct
gaaattcagtttcatcagcctgttcagatgtggattaatcaattagagaaagacaaggat
gtcattgcccaagcacaagcaatcgcgacattagagatgttgcctcaaccatctttttct
gttgttaatgctcttaataatttcctcagagaccccaaggccttctggagagtaagaatt
gaagcagcattagcaatggccaaaacggcctcagaggatactgattgggctggtttgctt
aatttgattaaattttttaaaagtcagagattcgatgcagatactggactccccaagcca
aatgaatttcgtgattttcccgagtattttgttcttgaggccattcctcatgctgttgct
atggtcagggctaccgaccaaaaaagccctagagaagctgttgagtttgttttgcaactt
ttgaagtacaacgacaacaacgggaatccttactctgatgttttctggttggctgcacta
gtccagtcagttggtgaacttgaatttgggcaacagagcattctctttttagcatcgcta
cttaaaaggattgatagacttttgcaatttgacaggctgatgcctagctataatgggatc
ttgactattagctgcatccggaccttgacccagattgcactgaaactatctggacttctc
tctcttgatcgtatcattgaactgataagaccttttcgaaattttaattccacgtggcaa
gttcgaattgaggctacccgagcacttctcgatcttgagtaccattgcaacggaattgat
gcagtattgttattgtttattaaatatttagaagaagagaaatccttgcgagggcaagtg
aagctcggggtccatgttatgcgtttatgtcagataatgagaagatctgattcaaatgat
tcagtcaataatgacactcttgttgctttgctcctcctacttgaaggccacatggcgttt
aacaatgtttgtctacgtcactacttgttctgtattttacaagtccttgcaggaaggccc
ccaacactttatggagttcccagagaatataaaacattgcatatgggtgactcaggaact
tgcagtgaacaaaagagggttttaacttctctcattcctgaattcaatccaccagagcca
tcatcagtctctgcagtagcgcctgtgccatgtattccagtaaccctgtcatcagaacca
cttcatactcccaaaccgaggcccgacagcttggcaattcccgaggtttccaaggaagga
gcagcagttgtagaggttcccaagcaagctacggcaatagcagaagctcccagagaagca
gcctctgtttccaacagtcatgaaaggaagttgccggttgttaagatcaaagtcagatca
tctgcggctacaagtagagcagatgccgataatcaaaccactgaaagatctcatgctgca
cctcgtgaaacagatgttggtcctagtagttctgtttccgttgatgcccctcaaagaaat
attgcagaggctacaagtatcagcaaccatattctggaggaggttaactcctgtcatgat
catggatctcacatgacagccagcattggcagtgcaaaacctgcgagttatggtgacgat
cttgggaaggagttccagtgcactgctgattccagtagggcttttggacattttcagcca
gaagatccttcatcatcgagcatcatacaagataacaacattgatgctgatgcacagaag
tatgcaagtcttcagacactttctttaccacagcacgatcatggcttagcctctttgcac
tctcgccatggaaaaaaggagaagaagaaagacaaagaaaagaaacgtaaacgagatagt
cataaagaacatcgcaatgatcccgaatacatcgagcgcaaacgactgaagaaagagaag
aaacaaaaagaaaaagagatggcaaagctattgaatgaggaggtgaagccactgccaatt
gcaatgcctcgtatgaaagaaccaccaaccaagtcaacacccgtgcagctagaatcaaac
gaacctagtggatcaagattaatcgtaggagttaatagtaagcccgaggcatcagaaggt
actgcttctgctgctcccaaacttagaatcaaattcaaaaatcggacgttgaacaattca
taa
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