Cucurbita moschata (crookneck pumpkin): 111433276
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Entry
111433276 CDS
T05248
Name
(RefSeq) transcription initiation factor TFIID subunit 12
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111433276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmos03021
]
111433276
03036 Chromosome and associated proteins [BR:
cmos03036
]
111433276
Transcription machinery [BR:
cmos03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111433276
Coactivators
SAGA/TFTC/STAGA complex
111433276
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
111433276
STAGA complex
111433276
TFTC complex
111433276
SAGA complex
111433276
SLIK complex
111433276
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
111433276
NCBI-ProteinID:
XP_022926039
UniProt:
A0A6J1EDW5
LinkDB
All DBs
Position
Unknown
AA seq
511 aa
AA seq
DB search
MDSSSQSPSEPPAASSPHPPPATTVSSATTSVAAPPQSSPNANPNINPSSFQNQNPNSKA
STPLPNQPSQQQQSLPTSQQVTRPSTALSGTWQPPSHFSHFSSPSPSASSGVPSPRPVAA
SSPAQRGGIAIGVPAHQPTPSPQPASFSASYGQHFGGLGRGGVSMSEPASNATPSQVRPP
MQGMQGLGMLGSSGSSSHMPQRPVQSSLRMPSTPNSTAQNFQGHGLLRVPSASSPSSSLP
NTSQGMQPSNQPWLPSTSQGKPPLPTPSYRPQANSPALQQRSHIPQQQNHPLTPASQQQQ
ISSTPQQQPAQSHQQQEHFAQQFQPSRSSQGLPHQQQAARAQGPANPKASPLAPSQTSNT
QTMSQSRAVSAETEEPCSRILSKRSIGELVNQIDPSERLDPEVEDLLVDLAEEFVESITT
FGCSLAKHRKSTTLEAKDILLHLEKNWNITLPGFCSDEIKIFRKPLTNDTHRERLAAVKK
SIVASEMASTRSSAGQAAGNTKSSLAKTPAV
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggattcttcgtcacagtcaccgtccgaacctccggcagcttcttctcctcatccacct
ccagctacaacagtctcctccgccacaacttccgttgcagctccaccgcaatcatcccca
aatgcaaaccctaatatcaatccgagttcattccaaaatcagaaccccaattccaaggcc
tcaactcctctgcccaaccagccgtcacaacagcaacagtctctccccacttcacagcaa
gtaactaggccttccaccgcattgtctggaacttggcaaccgccctcgcatttctctcat
ttttcttctccttcgccttctgcttcgtctggagttccttcacctcgccctgttgctgct
tcttctccagcccaaaggggcggcatcgccattggggttccagctcaccagccgactcct
tctcctcagcctgcttcattttctgcatcttatggccagcactttggtgggttgggccga
ggtggcgtcagcatgtcggaaccggcctccaatgcaactccttcccaggtgagacctcct
atgcaaggaatgcagggattgggaatgttgggatcaagtggttctagttctcatatgccg
cagagaccagtgcaatcctctctcaggatgccatctaccccaaactcaactgcccaaaat
ttccaaggccatggactcttgagagttccatcagcaagttctccaagttcttcattgcca
aacacatcacaaggtatgcaaccctccaaccagccatggttgccatctacctcacaagga
aaaccaccacttccaacaccttcatatagaccacaggcaaactcacctgctttgcagcaa
agatcacatatccctcaacaacagaaccatcccttaactccagcttctcagcaacagcaa
atttcatcaacccctcagcaacaacctgcacaatcacatcagcagcaagagcattttgca
caacagtttcaaccatcaaggagttcacaaggcttaccacatcaacaacaggctgcaaga
gctcaggggccagcaaacccgaaggcttctcctcttgcaccttcacaaactagtaataca
cagacaatgtcccagagcagagctgtaagcgcagaaactgaagaaccctgtagtagaatt
ctcagcaaaagaagtattggcgaattggttaaccagattgatccatctgaaagattggat
cctgaagtggaagatttacttgttgatctagcagaagagtttgttgaatcaattacaaca
tttggttgctcattagcaaagcatcgcaaatcaaccacattggaagcaaaagacatcctt
ctacatcttgaaaaaaactggaatataacacttcctgggttttgcagtgacgagattaag
atattcagaaaaccgcttacaaatgatactcatagagagcgtcttgcagcagtcaaaaag
tctattgtggcaagtgagatggcaagtaccaggagttctgccggacaggccgctggaaat
accaaaagcagtctggcaaaaacacctgcagtttag
DBGET
integrated database retrieval system
