Cucurbita moschata (crookneck pumpkin): 111433303
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Entry
111433303 CDS
T05248
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111433303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111433303
04121 Ubiquitin system [BR:
cmos04121
]
111433303
03036 Chromosome and associated proteins [BR:
cmos03036
]
111433303
03400 DNA repair and recombination proteins [BR:
cmos03400
]
111433303
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
111433303
Ubiquitin system [BR:
cmos04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
111433303
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
111433303
DNA repair and recombination proteins [BR:
cmos03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
111433303
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
zf-C3HC4_2
zf-RING_2
zf-C3HC4
BRCT_2
zf-RING_6
zf-HC5HC2H_2
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-rbx1
zf-RING_5
zf-RING_10
RTT107_BRCT_5
zf-UDP
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
111433303
NCBI-ProteinID:
XP_022926081
UniProt:
A0A6J1EDV9
LinkDB
All DBs
Position
Unknown
AA seq
1111 aa
AA seq
DB search
MGDPSHLEKMGIELKCPICLSLLNSAASLGCNHIFCFVCIEKSMKSGSNCPVCKVPYRRR
EVRPAPHMDNLVSIYKSMEAASGVNIFDTQNLSSDNLSDGDKQVEGDSSGSKRLKTETSG
RTAYELRTLKKEPQKIQKSKRKNSASSPLKPSFPRKKRVQVPQRPLSETPTRPVKLACSL
NEVNEEEPRKGTDASEDKGQPVLSPFFWLRERDEEDEKSNQESELDQPTDSMSMNVLSFS
DIKDSLEESTSKPPLEEVCGKPSNDLDLFDSEMFDWTQRACSPELCSSPFKRQAEDIAGT
ETSLLAAAPDEELRKQNPNGSYNGIGDILDILVPNVPPLEGNSVKDHTARANLTRKGRKK
KEIALRKCSKRLAEAASGKYSQAATETECSSQKQQHDVINSFGSLKNSTKRSNKKMHFDT
DANKAIFESVPAVPINLATPNENFKTKTPAFPEVEKVNQFLEKSRKNDRASKKTLFGIDA
IKATPENVPADPVSLGAPDGGHKNFGTEILALPKGEKVYELPESSCKKGRGRKKAHFGNN
ANKTILEDIPAHPISLGTPNDGPENFESEVSAFQEVEKASQFPEKSSKNGGAHGDQRVVQ
CRMKSKKQKLDSVDDKLQENPYFNQDQHDSSAIPVLITAPSAIATPTDQKSAREKQEKIF
SVCVITSEYDNITQGKYVGAQENEGQLSEKLGCSDDADNLDSMTKKGRSEKRERFDDEFQ
CAFCRSSEESEASGRMGHYFNGKPIDTDAIKNSKVVHAHWNCVEWAPNVYFDGSTAINLE
AELSRSRRIKCGCCGNKGAALGCYEKNCRKSFHVPCAKLMPQCRWDTENFVMLCPLHPDS
KLPSQDLEPQELKSSCAPKRQSNTKCIAVAREISNHGRFTFRESSKKLVLCCSALTTAER
EAVAEFQRLSGVPVLQKWDDSVTHIIASTDENGACKRTFKILMGILEGKWILGIEWIKAC
IQDMEQIEEERFEITLDVHGIRDGPQLGRLRVLNNQPKVFSGFKFFFTSDFLPSYKGYLQ
QLATAAGGTILLRKPVSSNKQSSSCSSPNCQVFIIYSLELPDQCNPGEKNEILNRRRSNA
ELLAESAAAKVATNLWLLNSIASSKLRSLVE
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgggggatcccagccatctggagaagatgggaatagagcttaaatgcccaatttgtctg
agtcttttgaactctgccgcttcactcggatgcaaccacatattctgctttgtatgtata
gagaaatcaatgaaatcgggttcgaactgcccagtttgtaaggtgccttatcggcgaaga
gaagttcgtcctgctccacacatggataatttggtgagcatttacaaaagcatggaagct
gcttcgggagttaatatatttgatacccagaatttgtcttctgataatttatctgatgga
gacaaacaagttgaaggtgatagcagtggttcaaaacggctcaaaacagaaaccagtggg
agaacagcttatgaactgagaactttgaaaaaagagccacaaaaaatacaaaaatccaag
cggaagaattctgcttcttcccctctgaaaccttcatttccaagaaagaagagggttcag
gtgccacaacgtcctctttcagagacacctaccagacctgtaaagttagcatgtagtctt
aatgaggtgaatgaagaagaaccgagaaaaggtacagatgcttcggaggataaaggtcag
ccagttctttcaccatttttttggttgagagaaagagatgaagaagatgaaaagtcgaac
caggagtcggagttggatcaacctacagactcgatgtcaatgaatgttctttccttcagt
gatataaaggattcactggaagaaagcacttcaaagcctccattggaggaagtgtgtggc
aagccatccaacgacttggatctctttgatagtgaaatgtttgactggactcaaagagcc
tgttcccccgaactttgttcaagtccctttaaacggcaggctgaagatattgctggaact
gaaacatcattattggcagcagcccctgatgaagaactaaggaagcaaaatccaaatgga
agctataatggaattggtgatatcctggacatcttggtacctaatgtgccccctctggag
ggcaacagtgtgaaggatcatactgcgcgtgctaatcttaccagaaaaggtaggaagaaa
aaggaaattgctctgaggaaatgttctaaaagattggcagaagcagctagtgggaaatat
tctcaggcggccaccgaaactgaatgctcgagtcaaaagcagcagcacgatgttatcaac
agctttggtagtctgaaaaatagtaccaaaagaagcaataagaaaatgcacttcgatact
gatgcaaataaggctatttttgaaagtgttcctgccgttccaattaatttagcaactcca
aatgagaatttcaaaaccaagacaccagcctttccagaagtggaaaaggttaatcaattc
ctagaaaagagtcgcaagaatgacagggccagcaagaaaacactctttggtattgatgct
attaaagcgactcctgaaaatgttcctgctgatccagttagtttaggagctccagatggt
ggacataagaattttggaaccgaaatattagctttaccaaaaggtgaaaaggtttatgaa
ctccctgaaagtagttgcaagaaaggcagaggcaggaagaaagcgcactttggtaacaat
gcaaataagacaattcttgaagatattcctgcccatcccattagtttaggaactccaaac
gatggtcctgagaattttgaatcagaggtatcagcttttcaagaagtggaaaaggctagc
caattccccgaaaaaagtagcaagaatggcggagcccacggagaccagagagtggtccaa
tgccgcatgaagtctaagaaacaaaagctggattcagtggacgacaaactgcaagagaac
ccatatttcaatcaggatcagcacgatagttctgctattcctgttttgatcaccgcaccg
tctgcaattgctacgccaactgatcaaaagagtgcacgtgagaaacaagagaaaattttc
tctgtttgcgtaataactagtgagtacgacaacatcacccaagggaagtatgttggtgct
caggaaaatgaaggtcagctctctgaaaagcttggatgcagtgacgatgcagacaacttg
gattctatgaccaaaaaaggtcgttcagagaaacgagaaagatttgatgatgaatttcaa
tgtgctttctgtcgctcatcagaagaatcagaggcttctggaagaatgggccactatttc
aatgggaagccgatcgatacagatgccatcaaaaactcaaaggtcgtacatgcccactgg
aattgtgttgaatgggcgcccaatgtttatttcgatggctcaactgcaattaaccttgaa
gctgagctcagtagaagtcgaagaattaaatgtggttgctgtggaaataagggtgctgct
cttgggtgttatgagaagaattgtcgcaagagctttcatgttccttgtgcaaagttgatg
cctcaatgtcgatgggataccgaaaattttgtgatgttatgccctctgcatccggattct
aaactgccaagccaggatctggagccccaagaactgaaaagcagttgcgctcctaagcga
caatcgaacactaaatgtatagctgttgcacgtgagatcagcaatcatggaaggtttaca
tttcgtgaatcatctaagaaattggttctgtgctgttcagctctcaccacagcagagagg
gaagctgtagctgaatttcagagattatctggagttccagtgttacaaaaatgggatgat
agcgttacacatataattgcatcaacggatgaaaatggagcatgcaaaagaaccttcaaa
attttaatgggtattttggagggaaaatggatattgggtattgaatggattaaggcttgt
atacaagacatggaacaaatagaggaagaacgctttgagattactctagatgtccatgga
atcagggatggccctcaacttggaagattgagagtcctgaacaatcaaccaaaagtcttt
tctgggttcaagttcttctttacatcagatttcttaccttcatacaaaggatatctccaa
caacttgcaactgcagcaggaggaactattctgcttagaaaaccagtttcaagcaacaag
caaagcagctcttgttcttcacctaactgccaagttttcatcatttacagtcttgagctt
cctgatcaatgcaatccaggtgaaaagaatgagattctcaatcgcaggcgatcgaatgcc
gaattgcttgctgagtcggccgcagccaaagttgcaacaaatttgtggcttttaaactcg
attgcaagcagtaaattaagaagccttgtggagtaa
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