Cucurbita moschata (crookneck pumpkin): 111436797
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Entry
111436797 CDS
T05248
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111436797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmos03021
]
111436797
03036 Chromosome and associated proteins [BR:
cmos03036
]
111436797
Transcription machinery [BR:
cmos03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
111436797
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
111436797
RSF complex
111436797
WICH complex
111436797
B-WICH complex
111436797
NORC complex
111436797
BRF complex
111436797
NuRF complex (fruit fly)
111436797
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
Myb_DNA-binding
HDA2-3
DEAD
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
111436797
NCBI-ProteinID:
XP_022930302
UniProt:
A0A6J1EQ14
LinkDB
All DBs
Position
Unknown
AA seq
1073 aa
AA seq
DB search
MAKPSKRQVSSDEAMSNGSSSSEEEEQTNEQINEEEDEEELEAVARSAGSDEDEAAEDSD
NDASPVENGEEEDGSNDGDDDKVDISRREKARLKEMQQMKKQKIQDMLDAQNAAIDADMN
NKGKGRLKYLLQQTEIFAHFAKGEHSSSQKKTKGRGRHASKITEEEEDEEYLKEEEDGLS
GTGNTRLLTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYL
HEYRGITGPHMVVAPKSTLGNWMNEIRRFCPILRAVKFLGNPDERRNIRENLLVAGKFDV
CVTSFEMAIKEKSCLRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQN
NLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEK
GLPPKKETILKVGMSQMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQ
GAEPGPPYTTGDHLITSAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGY
YYCRIDGNTGGEDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQ
VDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVN
KDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAKGEAATAELDAKMKKFTEDAIKFKMDE
TAELYDFDDEKDENKFDFKKIVSENWIEPPKRERKRNYSESEYFKQTMRQGGPTKPKEPR
IPRMPQLHDFQFFNTQRLSELYEKEVRYLMLTHQKNQLKDTIDVEETEDVGDPLTAEELE
EKEKLLEEGFSSWSRRDFNTFIRACEKYGRNDIKSIALEMEGKTEEEVERYANVFKERYK
ELNDYDRIIKNIERGEARISRKDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECD
RFMICMVHKLGYGNWDELKAAFRTSPLFRFDWFIKSRTTQELARRCDTLIRLVEKENQEY
DERERQARKEKKLAKSMTPSKRALARQSESPTNLKKRKQLSKDDYVNSGKRRK
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaccctcgaaacgacaggtgtcttccgatgaagccatgtccaatggctcgagc
tcgtcggaggaagaggagcaaactaacgagcagatcaatgaggaggaggacgaggaggag
ctcgaagcggtagctcgctcggcaggctctgacgaggatgaagctgccgaggattcagat
aacgatgcatcacctgtcgaaaatggcgaggaagaggacggaagtaacgacggggatgat
gataaagtcgatattagcaggcgtgaaaaggccagactaaaagaaatgcaacaaatgaag
aagcagaagattcaggatatgttggatgcacaaaatgctgcaattgatgctgatatgaat
aataaggggaagggacgcttgaaatatcttctgcaacaaactgagatatttgctcatttt
gctaaaggcgagcattcttcttctcaaaagaaaacgaaaggaaggggtcgtcatgcatca
aagataactgaagaagaagaagatgaagaataccttaaagaggaagaagatggtttatct
gggactgggaacactcgtctccttacacaaccatcttgtatccaagggaaaatgagggat
tatcaactagctgggttaaattggctcattcgactgtatgagaatggcatcaatggaatc
cttgcagatgagatggggcttggcaagacactacaaaccatctctctgttgggctatctt
cacgagtacagaggcataacaggcccccatatggtagttgcaccaaaatctaccctggga
aactggatgaatgaaattcgtcgtttttgccctatcttgcgagctgtaaagtttcttgga
aatcctgatgaaaggaggaatatacgggaaaatttactggtagctgggaagtttgatgtc
tgtgttaccagttttgaaatggccatcaaggagaagtcttgcttgcgtcgttttagttgg
cgctacattattattgatgaagctcatcgaattaagaatgagaattccctcctttcaaag
acaatgaggctttataataccaactatcgtcttctaatcactggcacgccacttcagaac
aatcttcatgaactgtggtctctcctcaattttcttttgcctgaaatatttagttcagct
gagactttcgatgaatggtttcaaatttctggggagaatgatcagcaggaggttgttcaa
caacttcacaaggtccttcgaccttttcttcttcggaggctgaaatcggatgttgaaaaa
ggtttaccaccaaaaaaggaaacaatacttaaagtaggcatgtcacagatgcaaaagcaa
tactatcgtgctttgctccagaaggatcttgaagttgttaatgctggtggtgagcgtaaa
cggcttcttaatatagcaatgcagctccggaaatgctgtaaccacccatatttatttcaa
ggtgctgaacctgggcctccttacaccactggagatcatcttattacaagtgctggtaaa
atggttcttttggacaagttgcttccaaagctgaaagagcgtgattctagagtcctaata
ttttcgcagatgacaagactgttggacattcttgaagattatttaatgtttcgtggatac
tactactgtcggattgatggtaacactggtggtgaagatcgtgatgcatccattgatgct
ttcaacaagccaggaagtgaaaaatttgttttcttactttcaaccagagctggaggtctt
ggtattaatcttgctactgcagatgtagtcattctttacgacagtgactggaatcctcaa
gttgatctgcaagcccaagatcgtgctcatagaattggtcagaagaaggaagttcaagtg
ttccggttttgcactgagtataccattgaggaaaaagttattgaaagggcttacaagaaa
cttgcccttgatgctttggtgattcaacaaggacgtttagcagagcagaaaactgtcaac
aaggatgagctacttcaaatggtgaggtttggtgctgagatggttttcagttccaaagat
agcaccatcacagatgaggacattgatagaatcattgcaaaaggagaagcagcaacagcg
gagcttgatgcaaagatgaagaaatttacagaagatgccattaaatttaagatggatgaa
actgctgaattgtatgatttcgacgatgagaaggatgaaaataaatttgacttcaagaaa
attgttagtgaaaattggattgaaccacctaaaagggagcggaagcgcaattactcggaa
tcggaatactttaagcaaacaatgcggcagggtggtccaacaaaaccaaaggagcccagg
attcctcgcatgcctcagttgcacgatttccaatttttcaatacacaaaggttgagtgaa
ctatatgaaaaagaagtgcggtatctcatgctaacacatcaaaagaatcagttgaaagat
acaatagatgttgaggagactgaagatgtgggtgatccattgacggccgaagagctggaa
gaaaaagaaaaactcttagaggaaggattttcttcatggagtcgcagagatttcaataca
tttattagggcttgtgagaagtatgggcgaaacgatattaaaagtattgctttggagatg
gaaggaaaaacagaagaagaagttgagagatatgcaaatgtctttaaagagagatacaag
gagttaaatgattatgatagaatcatcaagaacatagaaagaggggaagcaaggatttct
cgtaaggatgaaataatgaaagccatcggcaagaaactggatcgctacaaaaatccatgg
ttggagctcaagatccagtatggccagaataaagggaagttgtacaacgaagaatgtgat
cgtttcatgatatgcatggttcacaagcttggttacgggaactgggacgaactgaaagcc
gcatttcgtacatcacccttgtttcgctttgattggtttatcaagtcgcgaacaacacaa
gaacttgcaaggaggtgcgataccttaatccggttagtcgagaaggaaaaccaggaatat
gatgaacgggaaagacaggcccgtaaagaaaagaagcttgccaagagtatgacgccatca
aaacgtgccttggctaggcagtccgagagcccaactaacctaaagaagcggaagcaatta
tctaaggatgattatgtgaactctggtaagaggaggaagtga
DBGET
integrated database retrieval system
