Cucurbita moschata (crookneck pumpkin): 111438877
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Entry
111438877 CDS
T05248
Name
(RefSeq) TMV resistance protein N-like
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lectin_legB
Pkinase
TIR
PK_Tyr_Ser-Thr
NB-ARC
TIR_2
LRR_4
LRR_8
LRR_3
ABC1
AAA_22
Bact_lectin
NACHT
AAA_16
Haspin_kinase
ThsB_TIR
nSTAND3
APH
Neprosin
DUF6377
Motif
Other DBs
NCBI-GeneID:
111438877
NCBI-ProteinID:
XP_022932471
UniProt:
A0A6J1EWG2
LinkDB
All DBs
Position
Unknown
AA seq
1712 aa
AA seq
DB search
MASSIAEKSAASSSSSSSSPRWSYDVFLSFRGEDTRKTITNHLYEALRRQGIVVFRDDDE
LERGKAIADVLIKAIEESRSTIVILSQRYADSKWCLRELAKIVHCKNTLGQTVLVVFHKI
NSFDVISPTGIYENFFIDHENNIKENFEEVQSWRYAMREVGGLFGWHVNDETETEKVQEI
VKHVFNHLRPDLLSNDENLVGMNLRLSRINMLLGMGLDDVRFIGIWGMGGIGKTTIARAL
YKIVAREFHGSCILRNVRQALKNVGGLVSLQEKLLSMTLLKGKVRIKDGDGAAMIKENLR
NQKVFVVLDDVDHVSQVKELIGGEECLGFGSRVIITTRDEGLLVSLGVDRRYNVESFNDE
EALQLFCHEAFGVKSFKKGYLDLCMQFIKHAEGLPSELKVLGSSLHGRLVRSWEDAVKNL
NVCLNKEVYENLKMSYDALEMQERRIFLDIACFLTGRSKDQVIDTFKSFGIDAADGLKIL
QEKSLITMHGNKIQVHNLLKKLGQEIFLEESSGKCSRLWRRKDVNHALRHSQGVEDIESI
VLDLDEHGESHLNAKFFSSMTGLKVLLVHNVFLSGDLEYLSDKLRLLSWHGYPLRHLPSR
FQPSELLELSLPNSCLENLWKGEKRLDKLKIINLSNSEFLIKTPNLSMVPNLERLVLNGC
IRLQELHQSVGALKHLILLDLKDCKSLKRIPFNICFESLKILVLSGCSRLENFPEIVENM
KLMTELHLDDTAIRELHQSIGKLTGLELLDLRNCNNLLTLPDSIGCMTSLKHLALGGCSK
LDQIPYSLGNISCLKKLDVSGTSISHVPLSLRLLANLEVFNCEGLSRKFCYSFFPFWDTP
RNYNSHSFGLKLMTCLSNFHSVKVLIFSDCKLVDGDLPNNLSCLSSLQFLDLSRNFFANL
PNSLCQLINLRCLVLDNCSRLQSLPKLPLGLRYVLARNCVSLKEHYNQEDHRPISETEVM
ILSYPTSAEHRNSKMANLMQSKIYTAWENGQIMCGISFCFLEDSFGSEALKFQNFPIKPF
NVHTALPSPSPCFFLSFLELIRAFFQRHMALPNPLAFLFIFLHIAAFSAESSLLYNGFSQ
GKRLVRDGAAVVMPSGALRLTNTSQNVIGHAFYPDAIHLINNTSLSSFSTTFVFAIKPSS
PGHGGHVFAFTLAPSTKFEGAESGHFLGLFNRSNDGSVSNHIFAVEFDTVKGHDELKNSR
GNDVGININGVVSVSSQHASYSYFNDTILDHILIDSGDPIAVWIEYDGSRKSASVFIGLL
TDQKPEKPLLSCPIDLTPVLKEKMYVGFAASTGIETSSHYILGWSFAVNAPARPLRYSLL
PIEPERQSHPRASNPQFMVIVLVSSILVIVGIVVLAFLFRKMRKAESLEDWEKDCPHRFS
YKDLYTATNGFKDCQQIGIGGFGSVYKGSLRSTGAEIAVKRVKRNSSQGLKEFAAEIESL
GRLRHKNLVNLQGWCKKNNDLLIVYDYISNGSLHSLLYHPIQNFVLNWEQRLNILKGIAA
GLLYLHEDWEQVVIHRDVKPSNVLIDDDMNARLSDFGLSRQYDHNQVSHTTKVVGTIGYI
PPELFRTGKASKSADVYAYGVVVLEVACGRKPLGSGQFVLVDWVMKLYETGNVVHVADPK
LGSDYKVEEMEMVLKLGLLCTQWNPEARPCIRQVTRFLNGEDPLPALEPWAVYQALFESS
SRSMAKEVSTMWNSSSSMSVGPISSASINIGR
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcaatcgcagagaaatcagctgcttcttcttcttcttcttcttcttctcct
agatggtcgtatgacgtttttctgagcttcagaggcgaggacactcgcaagaccattacc
aaccatctttatgaagctctcaggcgacaaggcattgtggttttcagagatgacgatgag
ctcgagagagggaaggccattgccgacgtgctgatcaaagcgattgaggagtcgcgctcc
accattgttattctatctcaacgctatgcggattccaagtggtgcttgagggaattggct
aagatcgtccactgcaagaacacattaggtcaaacggttctcgtggttttccacaaaatt
aattccttcgatgtcatcagtcctactggaatttatgaaaatttctttattgaccacgag
aataacatcaaggagaatttcgaagaggttcagagctggaggtatgccatgagagaagtt
ggagggctctttggatggcatgtaaatgacgagaccgaaacagagaaagtccaagaaatt
gttaagcatgttttcaatcatctgcgtcctgatttacttagcaatgatgaaaatttggtt
ggcatgaacttgagattaagcagaataaatatgcttttgggcatggggctggatgatgtg
cgctttattgggatatgggggatgggtggaataggcaaaacaactattgccagagctctt
tacaaaattgttgcccgtgaatttcatggaagttgcattctgcggaatgttaggcaagct
ttaaagaatgttggaggcttggtatccttgcaggagaaacttctttccatgactctattg
aaaggaaaagttcgcattaaagacggtgatggagctgcaatgataaaggaaaacctacga
aatcaaaaagtttttgttgttcttgacgatgttgatcatgtgagccaggtgaaagaactg
ataggaggagaagaatgtcttggttttggaagtagagtcattattacaactagagatgaa
ggtttgcttgtttctcttggagttgataggcgatacaatgttgagagttttaatgatgaa
gaggctcttcagctcttctgtcatgaagcatttggggtcaagtcttttaagaaaggttat
ttggatctttgtatgcagtttataaaacatgctgagggcctcccatcagaacttaaggtt
cttgggtcttccttgcacggtagattggttcggtcgtgggaagatgctgtaaaaaattta
aatgtttgtttaaacaaggaagtctatgaaaacttgaaaatgagttatgatgcacttgaa
atgcaagagaggagaatctttttggatattgcttgttttcttacaggaaggagcaaagac
caagtcattgacacgttcaagagttttggaattgatgctgctgatggactaaaaattttg
caggagaaatccctcataaccatgcacggtaacaaaatacaggtgcataatttactcaaa
aaattaggtcaagaaatttttcttgaggagtcgtcaggaaaatgttctaggctgtggcgt
cgaaaggatgtcaaccatgctttgagacatagtcagggagtagaagacattgaatcaata
gtcttagacttggacgagcatggagagtcacacttaaatgccaagttcttttcgtcaatg
accggcctgaaagtgttgcttgttcataatgtgttcctttctggagatcttgagtatctc
tcagataagttgagacttcttagttggcatggatatcctttaagacatttaccgtcacgt
ttccagccgagtgaactattggaactcagtttaccgaatagctgccttgaaaatctttgg
aagggagaaaagaggttagataaattgaagataataaaccttagtaattctgagttcttg
atcaagacccctaatttgtcaatggtgccaaatcttgagagattggtcttgaatggttgt
ataagactgcaggagcttcatcaatctgtcggtgctctgaaacatctcatcttattggat
cttaaggattgcaaatctctcaaaagaatcccttttaatatttgtttcgaatcactaaag
attcttgttctttctggttgttcaagacttgaaaattttccagagattgtggaaaacatg
aaacttatgacagagcttcatttagatgacactgctattcgagaattgcatcagtcgatt
ggaaaactcactggcctcgaattgttggatcttagaaactgcaataatcttcttacactc
ccagactcgattggttgcatgacatcgcttaaacatcttgcattgggtggctgctcaaag
cttgatcaaattccatacagcttgggaaacatttcttgtttaaagaagcttgatgtgagt
ggtacttctattagtcatgtcccattgtctctacgacttctggcgaacctcgaagtattc
aactgcgaaggcctgtcccgaaagttctgctattcgttcttcccattttgggatacgcca
aggaattataattcacattcatttggtttgaagttgatgacttgcctatcgaattttcat
tctgtaaaagttctgatttttagtgattgcaagctggtagatggagacctacccaacaac
ctcagctgtctgtcttcattgcagtttctggatctaagcaggaactttttcgccaacctg
cctaatagtttgtgtcagcttatcaatctcagatgccttgtcttggacaactgcagtagg
ctccagtcattaccgaagctcccgctcggtttacgttatgtacttgctaggaattgtgtg
tcactgaaagaacactataaccaagaagatcacaggcctataagtgaaacagaagtaatg
attcttagttaccccacatcagctgaacaccggaactccaaaatggctaacttaatgcag
tcaaaaatatacacagcttgggagaatgggcaaattatgtgtggcattagtttttgtttc
ttagaagattcatttgggtctgaagctttgaaatttcagaacttccccatcaaaccattc
aatgttcacacggctctcccatccccatcaccatgtttttttctttcttttctggagctg
attagagctttcttccaaaggcacatggctcttccaaatcctttagcttttcttttcatc
ttcttgcatatagcagctttctctgcagaatcttctttattatacaatggatttagccaa
ggaaaaagattggttcgcgatggagccgcagttgtgatgccatctggtgcattgaggctc
accaacacttcacaaaatgtcataggccatgcattctaccctgatgccattcacctgatt
aataacacttctctttcatctttctccacaacttttgtgtttgccattaaaccatccagc
cccggccatggcggccacgtctttgcattcaccttggctccatcaaccaagtttgaaggt
gctgaaagtgggcacttccttggattattcaatcgttctaacgatggaagcgtatccaac
catatatttgctgttgaatttgacactgttaaaggacatgatgagctcaagaactccaga
ggaaacgatgttgggattaacatcaatggtgttgtatctgtttcctcccaacatgcttct
tattcctattttaatgataccattttggaccatatcttgattgattccggtgacccaatt
gctgtttggattgaatatgatggttccagaaaaagtgcgagtgtttttataggccttttg
acagatcaaaaaccggagaagccactcctttcctgtcctattgatttaactcctgttcta
aaggaaaaaatgtacgttggcttcgctgcgtcgaccggaatcgaaacaagctctcattac
attctgggatggagtttcgccgtgaatgcaccggcacggccgctgaggtactctctcctt
cccatagaaccagaacggcagagccatcctcgtgcatccaatccccagtttatggttatt
gtattagtttcatcgattctggtcattgtgggaattgttgtcttagccttcttgtttaga
aaaatgaggaaagctgagagtttagaggactgggaaaaagattgccctcacagattcagt
tacaaagacctctacacagcaacaaacggatttaaagactgccagcaaatcggaatcgga
ggattcgggtcggtatataaaggctcgttacgttcaactggagctgagattgctgtaaag
cgagtaaaaagaaactcgagccaaggattgaaggaattcgcagcggaaatcgaaagcttg
ggaagattaagacacaagaacttggttaatcttcaaggatggtgcaagaaaaacaacgat
cttctcatagtttacgattatatctcaaatgggagccttcattctcttttgtatcatcca
attcaaaacttcgttttgaattgggagcaaagattgaacatcctcaaaggcattgctgca
ggattactatatctccatgaagattgggagcaagtggtaatccaccgagatgtaaagccg
agcaatgttctaatagacgacgacatgaatgctcgattgagcgatttcggtttgtcgagg
caatacgaccacaaccaagtatcgcacacgacgaaagttgtcgggacaatcggctacata
ccgccggagttgtttcgaacggggaaggcgtcgaagagcgcggatgtgtatgcgtatgga
gtagtggtgctggaagtggcatgtggaagaaagcctctgggatcagggcagtttgtattg
gtggattgggtgatgaagttgtatgaaacgggtaatgttgttcatgtggctgatccgaag
ttgggttcggattataaggtggaggagatggagatggtgctcaaacttgggcttctctgt
actcagtggaacccagaagctcgcccctgcataaggcaagtcacgaggttccttaatgga
gaagacccactgccagcactggagccgtgggctgtctatcaagctctgttcgagtctagt
tcaagatccatggctaaggaggtttcaacaatgtggaacagttcttcgtccatgtcggtc
ggccccatctcttctgcctccataaatataggaagatag
DBGET
integrated database retrieval system