Cucurbita moschata (crookneck pumpkin): 111443400
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Entry
111443400 CDS
T05248
Name
(RefSeq) pre-mRNA-processing protein 40A-like isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111443400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmos03041
]
111443400
Spliceosome [BR:
cmos03041
]
Complex A
U1 snRNP components
U1 related factors
111443400
Complex B
111443400
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
Motif
Other DBs
NCBI-GeneID:
111443400
NCBI-ProteinID:
XP_022936969
UniProt:
A0A6J1F9U0
LinkDB
All DBs
Position
Unknown
AA seq
976 aa
AA seq
DB search
MENLSQSSGGQFRPVIPAQQGQTFISSSAQQFQLAGQNISSSNVGGPAGQIQQHQYPQSI
PQLVPRPGHPTYIASSSQPIQMPYVQTRPLTSVPPQSQQNVPAPNNHMHGLGAHGLPLSS
PYTFQSMSQMHAPVGVGNSQPWLSSVSQTTNTVSPIEQANQNSSVSATNPQSSSDWQEHS
SADGRRYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFTAPDGRKYYYNKVTKESKWT
IPEELKLAREQAQKEAAQGTQTDIAATTPQPTPAVGLSHTETPAISSVNSSISPTVSGVA
SSPVPVTPFVSVSNSPSVVASGSLTNTGTPIALTTSVPGTVSSQSVAAAGGTGPPAVLHA
NASSVTPFESLASHDVKNSVDGTSTEDIEEARKGMAVAGKVNETVLEEKSADDEPLIFAN
KLEAKNAFKALLESVNVKSDWTWEQAMREIINDKRYGALKTLGERKQAFHEYLGHRKKLD
AEERRIKQKKAREEFTKMLEESKELTSSTRWSKAVSMFENDERFKAVERSRDREDLFESY
IVELERKEKERAAEEHKKNIAEYRNFLESCDYIKVNSQWRKVQDRLEDDERCSRLEKLDR
LLIFQDYIRDLEKEEEEQKKIQKERVRRIERKNRDEFRKLLDEQITAGILTAKTFWRDYC
LKVKELPQYQAVASNISGSTPKDLFEDVLEELENKYHEEKAQIKDVMKAEKITITSSWTF
DDFKAAIEEGGSLAVSDINFKLVYEDLLERAKEKEEKEAKRRQRLADDFSGLLHTFKEIT
NSSIWEDSKHLFEESEEYRSIGEESFAKEVFEEYIIHLQEKAKEKERKREEEKAKKEKER
EEKEKRKEKERKEKEREREKEKGRVKKDETDSENVDASETHVYREDKKREKDKDRKHRKR
HHSATDDGGSDKDEREESKKSRKHGSDRKKSRKHAYSPESDSESRHRRHKRDHRDGSRRN
HDELEDGELGEDGEIQ
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatctgtctcagtcctcaggtggacagtttcggccagttatcccagcacaacaa
ggccagacgttcatttcatcatctgcccaacagttccagttagcagggcagaatatatct
tcttcaaatgttggagggccagctggtcaaatccagcaacatcaatatcctcaatcaata
ccgcagttagttccaaggcctggccatcctacctacatcgcttcttcatcccagcctata
caaatgccttatgttcagacaaggcctcttacttctgtcccacctcagtcccagcaaaat
gtgcctgcaccaaataatcatatgcatggcttgggtgctcatggactacctctttcttca
ccatataccttccagtcaatgtcacaaatgcatgcacccgttggagttggtaatagccaa
ccttggctgtcttctgtaagccaaactacaaacaccgtctcaccgatcgagcaagctaat
cagaactcttcagtttctgccacaaaccctcagtcttcatctgattggcaagagcattca
tcagctgatggaagaaggtattattacaacaaaaaaaccaaacagtccagttgggagaag
ccattggaacttatgacaccacttgagagggctgatgcatcaactgtgtggaaggaattt
actgctccagatggaagaaagtactattacaataaggtgacgaaagaatcaaagtggacc
attccagaagaactgaagttggctcgtgagcaggctcagaaagaagctgcccaaggaaca
caaacagatatagctgctacaacacctcaacctacacctgctgttggtctctcccatact
gaaacaccagcaatttcatctgttaactccagcatttctccaacggtatctggggttgca
tcgagtccagttccagtcactccttttgtttccgtatccaattctccttcagtggtggct
tctgggtcattgaccaatactggcactcccattgctttaacaactagtgtgccaggaaca
gtttcttctcaatctgtcgctgctgctggaggtaccggtcctcctgctgtgctccatgcc
aatgcttcgtcagtgactcctttcgaaagccttgcatctcatgatgtcaaaaattctgtt
gacggaacttctacagaagacatcgaggaagcaaggaagggaatggcagttgcaggaaaa
gttaatgagaccgttttagaggaaaaatctgctgatgatgaacctttaatatttgccaac
aaactggaggcaaagaatgcattcaaagcgcttctggaatctgtcaacgtaaaatcggat
tggacgtgggagcaggctatgcgagaaataattaatgacaaaagatatggtgccttgaaa
actcttggtgaacggaagcaagcattccatgagtatttaggacacaggaaaaaattggat
gcggaggaaagacgtataaaacagaaaaaagctcgtgaggagttcaccaagatgttggaa
gagtccaaggaactcacatcatctaccagatggagcaaagctgttagtatgtttgagaat
gatgaacggttcaaagctgttgaacgttctagagaccgggaggatctttttgaaagctac
atagtggaacttgagaggaaggaaaaagaaagggctgcagaggagcacaagaaaaatatt
gctgaatataggaacttccttgagtcatgtgattatataaaggtgaacagccagtggcgt
aaagtacaagatcgattggaagacgatgaaagatgctcacgtcttgagaaacttgatcgc
ttgcttattttccaggactatatacgtgacttggaaaaggaggaagaggagcagaaaaag
atacaaaaggaacgtgtgagacgaattgaaagaaaaaaccgcgacgaatttcgcaaactc
ttggatgaacaaattactgctggtattcttacagctaagactttctggcgtgattactgt
ttgaaggtcaaggagttgcctcagtatcaagccgttgcttctaatatatctggctcaaca
ccaaaggacttgtttgaggatgttctggaggaattagagaataagtatcatgaagaaaaa
gctcagataaaagatgtgatgaaggcagagaagattaccatcacttcatcatggacgttt
gatgactttaaggctgccattgaagagggtggttctcttgcagtttcagatataaatttt
aagcttgtatacgaggacttactagaaagagccaaagaaaaggaggagaaagaagccaaa
aggcgtcaacgtctggctgatgacttctcaggacttctccatacattcaaggagattacg
aattcttccatctgggaggatagcaaacatctttttgaagagagtgaagaatatagatca
attggggaagagagctttgcgaaggaagtttttgaggaatacatcattcatttacaagaa
aaggcaaaagaaaaggaacgcaagcgtgaggaggagaaggctaagaaggaaaaagaacgt
gaggaaaaagagaagcggaaggagaaagagcgaaaggagaaggaaagagaacgtgaaaag
gaaaagggccgggttaagaaggatgaaacagatagtgaaaatgtggatgcaagcgaaact
catgtctacagagaagacaagaaaagggagaaggacaaagataggaaacatcgtaagcga
catcatagtgccactgatgatggtggttctgataaagatgagagagaggagtctaagaag
tcccgcaaacacggtagtgaccgaaagaaatcaaggaagcacgcatattcacctgaatca
gacagtgagagtaggcacagaaggcacaagagagatcatcgagatggttcccgtagaaat
cacgacgaactagaagacggggagcttggcgaggatggggaaattcaatag
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