KEGG   Cucurbita moschata (crookneck pumpkin): 111445069
Entry
111445069         CDS       T05248                                 
Name
(RefSeq) chromatin structure-remodeling complex protein SYD-like isoform X1
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C SnAC ResIII DEAD DEAD_2 IKKbetaNEMObind
Other DBs
NCBI-GeneID: 111445069
NCBI-ProteinID: XP_022939059
UniProt: A0A6J1FFZ2
LinkDB
Position
Unknown
AA seq 3381 aa
MASAQNVELEAAKFLHKLIQESRDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMET
VINQHGLDIEALRASRLPLTGGTQMGDSTTAQYAGSSSVVGTAKDSKMGISGSDTRSGSL
APSKPPVAPSSTDHDYYQGPATHRSGQSFDQGSPSSLDSRSANSQSQEKHDSVSWDKQLN
DKDGKKGTKKRKKVDTSVMEPSSDDTHQLDSRNLSVNPRNVKTNRVEPPAYLVKGGNIEQ
VKHGLTKAAEKAIDPPMYSVNRGGGISTSGEKVLESELPISSTSSVDAAKMIQGAWRNNG
PEMSMLRNPVSREAGKLPVSQVPTSSQSRLPFKEQQLKQLRAQCLVFLAFRNGLMPKKLH
LEIALGNNSPKEEGLHKDVDPRGIAQSFNEARSSSEVMMPSGKLDAARGTGTMIPGAVSA
GRTYEVDSMKEVDNRREEDNKGPLFDHSVQAEVRKPETELMREKAISQTFLSTASHPLDF
SSARGSLTANNPFEDLGNSNLLIGQTNQATATVGMSKPLNPRIDSTNEVSRGSLPAFASQ
HELVVDRNNDASARLHVVRNNSGLGSQRTNSWSSFSIGERWKPISGTYDQYHAVMPLRDA
SVISNLASHDYRNMPESEPRCITEVHKVTSVDEGINGSLNTMEQEDDGKSVASDLPMSRK
YTMSEKWIMDRQKKKLLNEQNWLLKQQKTEKRIATRFDKLKSTVSSSDDISAKTRSVIEL
KKLQLLQLQRRLRNDCLNDFFKPISNEMDRLKSFKKHKHGRRIKQLEKFEQRMKEERQKR
IRERQKEFFGEIEVHKERLDDVFKFKRERWKGFNKYVKEFHKKKERIHREKIDRIQREKI
NLLKINDVEGYLRMVQDAKSDRVKQLLKETEKYLQKLGSKLQEAKSTESRFGHDTDDGCD
VNTAEKSEFAIENEDESDQAKHYLESNEKYYLMAHSVKESITEQPACLHGGKLREYQMNG
LRWLVSLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGPFLVVVPSSVLPGWESE
INFWAPSVLKIVYSGPPEERRRLFKERIVHQKFNVLLTTYEYLMNKHDRPKLSKIHWHYI
IIDEGHRIKNASCKLNADLKYYRSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDF
SQWFNKPFQSNGDSSAEEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERL
VRCEASAYQKLLMRRVEDNLGSIGSTKVRSVHNSVMELRNICNHPYLSHLHAEEVDNLIP
KHYLPPIVRLCGKLEMLDRILPKLKATDHRVLFFSTMTRLLDVMEEYLHWKQYRYLRLDG
HTAGGDRGALIESFNGQNSPYFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQA
RAHRIGQKRDVLVLRFETVQTVEEQVRAAAEHKLGVANQSITAGFFDNNTSAEDRREYLE
SLLRECKKEEAAPVLDDDSLNDLLARSEPEIDVFETVDKERREHEMATWKKLVVGHGISE
SIPPMPSRLVTDNDLKEFYEVMKITEEVPKPREGAQVGGVKRKSEYLGGLDTHNYGRGKR
AREVRSYEEQWTEEEFEKMCKVDSPESPGPKEAVAGESSTSISGPVVGDVLKEELPAASP
LPPVEPMAQHQTPPSRRGRGRPKRAAVDKSPAPVVSPSPSIADDVDTGLQGETISSISKT
GGLDSLPSEGTTYQLVKEVSANSQLTTPVPSIIPASESAPACSPARVQVKGHGRKTQTGQ
QPPRRRGKKQGLVPPPVPGSLSSEVCQDDQGKSTNPVASQVNVASDIPSSLPGSGPSKPV
TGPNDQPAVEPVQPRGQSRKTQSAAGAPRRRGKKQVVAASLPNTMAGASLSSNANLQMNH
IDSSLSTVNQEDKLEDNPNKSKETISLSTCGSTMEPQGPTPEQNQNADSRGISNVIKEAS
SGDCTSKANPSEHLSKSRAAQDATVTNNRVDETLKSHSLRDTTYPVTSTPETAVPTCGPP
AVSVAVGMSPKAVTDVARETAPISQPIHSSASVASSVQIASHCPPPVYVEPKRQGRKTAK
RVEPSQRRGKKPASLPSVVLDGSAGKESKDLNVLVQPGPLGDSSCKDIGLIGKTETENQE
STNVQNHAGCTQIIDTVDSQDLKRKEQVPKPAQHKQLLASSTKIVATGALDKTSASGRYQ
TANVNDVARVMKEVFSGTGLSKAKVGASSEIENKDASAMPVLSKSSVEVTKSHKSEAILN
SNIPVEAHEKEYSDVANEMRPDSANALEESIVLKIDDDGSGCAKADSVNKLVESRETYDG
CSTVVSGSAISSNFNNADHNPPESSPVSSSLGDSKVSKAPEVMDNVLENEANPVSGGSLK
SYPDRSDYKVPSPSKNDGVNHPAPSNNMAELPLEEPSECPLDMSSRSHTTVTVATTIVEN
AEISANQAHPSQSKTLDDQRITSVDCPCEPATDITKKTLDVEGFSEPSEFDHTSLECPAT
TSMPEMSGQCSIDYSPEKIGMDSGRGDNSKFSFEVSVEFIKASNNTEPYHTAVETLKARP
ARQDCPSVSSGTTENTMMNETVSVRAAVKMEGDLRPVMIVETSMEDPGQDCHSVCQSLSA
HRENLDHPDVSNFNESSDACMPGAEIEVQERVSVTTMNIESKHKEVNDTDPAVEHMDAAS
KQGRSSGSQDLSNAGAPNLVEQTLGNKLELTSEELPTLPSSDHRVEAAECTLKTDVEGQK
TSLNDSSNHIPDENLKVSDHVEENAEFVNPENVPEKSVPIPRIQDNEGNRADNHGACLRD
MDISSSDAVVQMDNSDEKRVSEGKTDDMVLLPASLQGGEENCSFTSVGDQVDNLGNQEEP
NKFGVKGSPGEKKQSDPLVEDVLGTSAQSLSSSEVKDSYKMTLLDTNLDNSGDQTDLPVS
SSTVTDREKIGDSSKDDSCGCTVTDSVEALEDSELLTNEVSDVSVVPASSSQMEPISSPV
SLEGPSDYQGSDHMVATQDNLVLSENVSSEEDKLRNSFEKTLLDSADPSEDRKESDISSK
GQLLSITENLRLNDPSNHLTVSKLEDSAGDQTGDVPQTGEAVSVNAVDTFTQPAPPTTME
EEKSDALLDSGLIASSSSRPLNDIQGSQPVTDPMDSSQAGVILEKNISGETIVSSSSPVS
EEVGADLMQSVAEVQTIDETDASEVGEPSLEKAVTEVANLPSSLPAETESMESSQVPSPI
DSAIAVVEAVIRDEADDVLTANERCQSAGGSSVQDPADSIAGVEMVIICDKSDVPPTCDT
AQGAVDTAAICAQIDVPPVCDTVQDPADSSTIHDRVDVPSACNSAQGTVDTAVECNQVDV
PPACNLVQSSTDSATAGAETTISNQVDVSSSSTLPENESANLDLPPSCSEVEDESIEHRL
EETPVNKSSVESESEDPKQSE
NT seq 10146 nt   +upstreamnt  +downstreamnt
atggcgtccgcacaaaatgtcgagttggaggcagcaaagtttctgcacaaactaattcaa
gaatctagagacgagccagcaaaattggctacaaaactctacgtgatattgcaacacatg
aagtcgagtgggaaagaacattccatgccatatcaagtaatatcaagagccatggagact
gtcatcaatcaacatggtcttgatattgaagctttgagggcttcacgccttcctctcact
ggtggaactcagatgggtgattctactactgcacaatatgcgggctcctccagtgttgtt
ggtacagctaaagattccaaaatgggtatatctggaagtgacaccagaagtggctcactt
gctccaagcaagccacctgttgccccaagtagtacagatcatgattactaccaaggacct
gcaactcatcggagtggtcaatcttttgatcaaggaagtccttctagtttggattcgagg
tctgccaactcacagtcacaagagaagcatgattcagtgagttgggacaaacaattaaat
gataaggatggtaagaagggcaccaagaagaggaagaaggtggatacatcagttatggaa
ccatctagtgacgatacccatcaacttgattcccgcaatctgtcggttaatcctaggaat
gtgaagacaaatagggtcgaaccacccgcatatctagttaagggaggcaatattgagcag
gtgaagcatggattaacaaaggctgctgaaaaggctattgaccctccaatgtattctgtg
aacagaggtggtgggatatctacctcgggcgaaaaagttttggagagtgaactacctata
tctagcacatcatcagttgatgctgcgaaaatgattcagggtgcatggcggaacaacgga
ccagaaatgagtatgttacgtaaccccgtttctagagaagcaggaaagcttcctgtttct
caggttcctacctcatcccaatctcgtttgcctttcaaggaacaacaattaaagcaactt
agggctcagtgccttgtgtttttagcattcagaaatggtttaatgccaaagaaactgcat
cttgaaattgctctcgggaataattctcctaaagaagaggggcttcacaaagatgttgat
cctagaggcattgctcaatcttttaatgaggccagaagttccagtgaagtcatgatgcca
tcaggaaagttggatgctgcaaggggaacaggtacgatgatcccaggcgccgtatctgct
ggaagaacctatgaggttgactccatgaaggaagtagataatagaagagaagaggataac
aagggcccactttttgatcattctgttcaagcagaagtaagaaagccagaaactgaacta
atgcgggaaaaagcaatttctcaaacattcttgagcactgcatcgcatccccttgacttt
tcgagtgcaagggggagcttaactgcaaataatccttttgaggatttggggaatagcaat
cttctgattggacagaccaatcaagccactgctacagtgggtatgagtaagccactaaac
cctagaattgacagcacaaatgaggtttctaggggaagtctaccagcctttgctagtcag
catgagctggtagttgatagaaataatgatgcatctgctcggttgcacgttgttagaaac
aatagtggtttagggagtcaacgtactaatagttggtcttctttttcaataggggagcgg
tggaaacctatctctgggacatatgatcaataccatgctgtaatgcctttgagagatgct
agtgtgatctcaaatcttgcatctcatgattatagaaatatgccagaatctgaacctaga
tgcatcacagaagtgcacaaagtgacatctgtagatgaagggataaatggcagcctaaat
actatggaacaagaagatgatggtaagtcagtggcatctgatttgccgatgtctcgaaag
tacaccatgtcagagaaatggataatggatcggcagaaaaagaaactcctaaatgagcaa
aattggttactgaaacaacaaaaaactgagaaacgtattgccactcgttttgataagtta
aagagtactgtcagctcatcagatgatatatctgcaaaaactagaagtgtaatagaattg
aaaaaacttcaactcttgcagcttcagcgtcgcctcaggaatgattgtctaaatgatttc
ttcaaaccaatttcgaatgagatggaccgcttgaaatctttcaagaagcacaaacatggt
aggaggattaaacaacttgaaaaattcgagcagagaatgaaggaggagaggcaaaagaga
atacgagagaggcaaaaggagttctttggtgagattgaagttcacaaggaaagacttgat
gatgtatttaaatttaagagagagaggtggaagggtttcaataagtatgtcaaggagttc
cacaaaaagaaggaacgaattcatcgtgagaaaattgacagaatccaacgtgagaagatc
aatcttttgaagatcaatgatgtcgaggggtatctgcgaatggtgcaggatgcgaaatcg
gatcgtgttaagcaacttctcaaggagactgagaaatatcttcaaaagcttggatctaag
ctacaggaggcgaagtccacagaaagccggtttgggcatgatacagatgatggatgcgac
gtgaatactgctgaaaaaagtgaatttgctatcgagaatgaagatgaaagcgatcaggca
aagcattacttggaaagtaatgagaagtactacttgatggcacatagtgttaaagaaagc
ataactgagcagccagcctgccttcatggaggaaagttgagggagtatcagatgaatggc
cttaggtggctcgtttcgttatacaacaaccatttgaatggaattcttgctgatgaaatg
gggcttggaaaaactgttcaggtaatttccctgatctgttatttaatggagactaagaac
gatcgaggtccttttttggtggttgtaccatcatcagttttacctggatgggagtccgag
atcaacttctgggctccaagtgtgcttaaaattgtgtattctggacctccagaagagcgg
cgcagactattcaaggagagaattgttcatcagaagtttaatgtacttctgaccacatat
gagtatctgatgaacaaacatgataggccaaaattaagcaaaattcattggcactatatt
ataattgatgaaggccatcgcataaagaatgcttcatgcaagttgaatgctgatctgaag
tactaccgtagttctcacagattactcttgaccgggacaccgctacagaacaaccttgag
gagctttgggcattactgaactttttgttgccaaatatttttaattcatcagaggatttt
tctcagtggttcaacaaaccattccagagtaatggtgatagttcagccgaagaagccttg
ctttctgaagaggagaatcttttgatcataaatcgacttcaccaagttcttcgcccgttt
gttcttcggaggcttaaacacaaggtggaaaatgaactgccagaaaagattgaaagactt
gtacgatgtgaagcttctgcatatcagaaacttttaatgaggagagtagaggataacctt
ggttcaataggaagtacaaaggtccgatcagtgcataactcggtgatggagctgcgtaat
atttgtaaccatccttatctaagccatcttcatgcagaggaggttgataatttgatacct
aagcattacctgccgccaattgttagactctgcggaaagcttgagatgttagatagaata
ttgccaaagctaaaagcaactgatcatcgggttctcttcttttccaccatgactaggctg
ctcgatgttatggaggaatatcttcactggaaacagtatcgatatctacgattggatgga
catacagctgggggagatcgtggtgctctcattgagtcatttaatgggcaaaattctccc
tattttatattccttcttagtattcgagctggtggtgtgggagtgaatcttcaagctgct
gacacagtgattattttcgacacagactggaacccacaggttgatttacaggcacaggca
agagctcataggatcggccagaagagggatgtgcttgttcttagatttgaaacagttcaa
acggtggaagaacaagtgagagctgctgcagagcataaacttggagtggctaaccagagt
attacagccggcttttttgacaacaatacaagtgctgaagatcgaagggaatatttggag
tctcttctacgcgagtgtaagaaagaagaagctgcacctgtactagatgatgattctctg
aatgatctcttagcacgcagtgagccagagattgacgtgtttgaaacagtggacaaagaa
cgacgagagcatgagatggccacatggaagaagctggtagttggtcatggaatttctgag
tctattcctcccatgccttcacgtcttgtaacagataatgacctgaaagaattctatgaa
gtaatgaagataactgaagaagtaccaaaacctagggagggagcccaagtcgggggggta
aagaggaagagcgaatatcttggaggtctcgacacacataattacgggagggggaagcgg
gcaagagaggtgcgatcctacgaggaacagtggacagaagaggagtttgaaaagatgtgc
aaggttgactcgcctgaatccccagggccaaaggaagctgtggcaggagaatcgtcgacc
agtattagtgggcccgttgtaggagatgttttgaaggaagaacttcctgctgcctcccct
ttgcctcctgttgagcctatggctcagcatcaaacaccaccctcgaggcgaggtcgtgga
agaccaaaaagagcggctgtcgataagtcacctgctccagtggtttctccgtctccttcc
atagcagacgacgtggacacagggttgcaaggagaaactatttcaagcatttctaaaact
ggcggtcttgattctttgcctagtgaaggaacaacatatcaacttgttaaagaggtttct
gcaaactctcagttaactacccctgtgccttctataattcctgcctctgagtcagctcca
gcttgctcgcctgcacgggttcaagtgaaaggtcatggtcgaaaaactcaaactggacaa
caacctcctcgacgaagggggaaaaaacaggggctggtcccacctcctgttcctggtagt
ctatcctctgaagtatgtcaagacgatcagggtaaatccacaaacccagtggcaagtcaa
gttaatgttgcaagtgacattccctctagtttacctggttctggcccttcaaaacctgtc
actggacctaatgatcagccggctgttgagcctgtacagcctagaggacaaagtcggaag
acgcaaagtgcagctggagcaccacgacgtagaggaaagaaacaagtagtagcagcttca
ttgcccaacaccatggctggtgctagtctaagttcgaatgcgaatttgcaaatgaaccat
attgattcttctttgagtactgtcaatcaggaagataaactggaagataatcccaataaa
agcaaggagacaatcagcctatcaacttgtggtagtactatggaaccacaagggcctact
cctgaacaaaaccaaaatgctgattctcgtggcatttctaatgtgatcaaggaggcttct
tctggagattgcacgtccaaagcaaacccttctgagcacttgagtaagagtcgtgcggcc
caggatgcaactgtaacaaataatcgtgttgatgaaacactgaagagtcatagcttgcga
gacacaacttatccagttacatctactccagaaactgcagttccaacatgtggtcctcca
gccgtttctgttgctgtggggatgagtcccaaagctgtaacagatgttgctagagagact
gctcctatttcgcagccaattcattcgtctgcatcagtggcttcaagcgtgcaaattgca
tctcactgtccaccacccgtatatgtggaacctaaacggcaaggtcgtaagactgctaaa
agggtagagccctctcagcgtaggggaaaaaaaccggcctcgttgccttctgtcgttctt
gatggttcagctggcaaggaatctaaagatttgaatgtgcttgtgcaaccagggccattg
ggggattcaagttgtaaagacataggcctaataggtaaaactgagactgagaatcaagaa
tcaaccaatgttcagaatcacgcaggttgtacccaaattatagatactgtggattcccag
gatctgaaaagaaaggagcaagtacccaaacctgctcaacataaacagcttttggcatca
tcaacaaagattgttgctactggagccttggacaagacctctgcatcaggccgttatcaa
actgcaaatgtaaatgacgttgctcgggtaatgaaggaagtcttctctgggactggcttg
tcaaaagctaaagttggagcgtcatctgagattgaaaacaaggatgcttccgcgatgcct
gttttgagcaagtcctctgtggaggtgaccaaaagtcataaatcagaggctattttaaat
tccaacattccagttgaggcccatgaaaaagaatattcagatgtagctaatgaaatgaga
ccagattctgcaaatgctttagaagaatccatcgttctgaagatcgatgatgacggttct
ggatgtgcgaaggctgattcagtaaataaattggttgaatcaagagaaacatatgatgga
tgctcaactgtggttagtggctctgcaatttcatcaaacttcaacaatgctgatcataat
cccccagaatcctcacctgtttcctctagtctgggtgattccaaggtatcaaaggctcct
gaggtgatggataatgtattggaaaatgaagcaaaccctgttagtggaggatctttaaaa
tcttatcctgatagaagcgactacaaagttccctcgccttcgaagaacgatggtgtaaat
catcctgctccttcgaataacatggcagaactgcctttggaagagccttcagaatgccct
cttgatatgtcaagtagatctcatactacagtgaccgttgccacgaccattgttgaaaat
gcagaaatttctgctaaccaggctcatccgagtcaatcgaaaactcttgatgatcaaaga
ataacttctgtggactgtccctgtgaaccggccactgatatcacaaagaaaactcttgac
gtggagggattctcagaaccatcagaatttgatcatacaagtcttgaatgtcctgccacc
acatctatgcctgaaatgtcgggtcaatgttcgatcgactactctcctgagaagataggc
atggattctggaagaggtgataattctaaattttcttttgaagtttcagttgaatttatc
aaggcatctaacaacacagaaccttatcatacagctgttgaaactttaaaagcaagacct
gcgaggcaagattgtcccagtgtatcttctggtacaacagagaatactatgatgaatgaa
acggtgtctgttcgtgctgcagttaagatggaaggtgatcttagacctgttatgattgtt
gaaacttcgatggaggatcctggtcaagattgtcatagtgtctgtcaaagtctctcagct
catcgtgaaaatctcgatcatccagatgtttcaaattttaacgagagttccgacgcatgt
atgccaggtgctgaaattgaagttcaagaacgtgtttctgtaactactatgaatatcgag
agtaaacataaagaagtgaatgatactgatcctgctgttgaacacatggatgctgcctcg
aagcaggggaggtctagtggtagtcaagatctttcaaacgcaggtgcacctaatctggtg
gagcaaacattgggaaataaattagagcttacttcagaagaattgccaactttaccttca
tctgatcatagagttgaggctgcggaatgcactttaaaaactgatgttgaaggtcagaaa
acatcattaaatgatagtagtaatcatattccggatgagaatttgaaggtatcagatcat
gtcgaagaaaacgctgaatttgttaatcctgagaatgttcctgagaaaagcgttccgatt
cctcggattcaggataatgaaggtaaccgagctgacaaccatggtgcatgtctcagggat
atggatatctccagttctgatgctgttgttcaaatggacaattctgacgaaaaacgtgta
tcagaaggtaaaactgatgatatggttctgctaccagcctcattgcagggaggggaagaa
aattgttctttcacatctgtgggagatcaagttgataatttagggaaccaggaggaaccc
aacaaatttggagttaaagggtctcctggggagaaaaagcaatccgatccactagtcgag
gatgttcttggaacttcggcacaatctttatcttcttcagaagttaaggattcatataag
atgacattgctcgatacaaatttagataattcaggtgatcaaactgatttacctgtatcc
tcgtccacagtgacagacagagaaaagattggggattcttccaaggatgattcgtgtggc
tgcacggtcacagattcagtagaagctctcgaggatagtgaactgttaacaaacgaggtg
tcggatgtttcggttgtgcctgcttcatcgtctcaaatggaacccattagctccccagtc
tctctggaggggccaagtgattatcaaggtagtgaccatatggttgcaacacaggataac
ctggttttgtcagaaaacgtatcatctgaggaagacaagctgcgaaactcgttcgagaaa
accttattagatagtgcagacccgtcggaggatcgtaaggagtctgatattagcagcaag
ggacagcttttaagcatcactgaaaacctccgcttaaatgatccttccaatcatctaacg
gtatcaaagttggaagattcagctggtgatcagacaggggatgttcctcaaacaggggag
gctgtgtcagtaaatgcagttgatacctttactcagcccgcacctccaacaaccatggaa
gaagagaagtccgatgccttactcgacagtggtctaattgctagctcatcatcacggcca
ctgaacgacatacaaggttctcagcctgttacagatccaatggattcttctcaagctggt
gtgattttagaaaagaatatatcaggagaaacaattgtgtcttcgtcttctccggtttca
gaggaggtaggagcagatctaatgcaatctgttgctgaagttcagacgattgacgaaacc
gatgcatccgaggtgggggagccttctctagagaaggctgtaacagaagtagccaatctt
ccatcctccctacccgctgaaactgaaagtatggaaagctcacaagttccaagtccgatc
gatagcgccattgcagttgtagaagcagtcatacgcgacgaagccgatgatgtactcaca
gcaaatgaaaggtgccagtcagcaggtggctcatcagtgcaggatccggctgatagcatt
gcaggtgtagaaatggtcatcatatgtgataaatctgatgttcctccgacctgtgacaca
gcacagggtgcagttgatacagcagccatatgtgctcaaattgacgtacctccggtttgt
gacacggtgcaggatccagcagatagcagtaccatacatgatagagtcgatgtaccttca
gcttgcaattcagcacagggtacagttgatactgctgtcgagtgtaatcaagtcgatgta
cctccagcttgcaacttggtccagagttcgactgatagcgccactgcaggtgcagaaact
accataagcaatcaagttgatgtttcctccagttcgactctgccagaaaatgaatccgca
aatttggacctgcctcctagctgttcagaagtagaggacgaaagcatcgagcaccgactg
gaggaaactccagttaacaagagttcagttgaatcagaatcagaggatccaaagcaaagt
gaatga

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