Cucurbita moschata (crookneck pumpkin): 111445956
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Entry
111445956 CDS
T05248
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111445956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmos03036
]
111445956
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
111445956
SWR1 complex
111445956
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
111445956
NCBI-ProteinID:
XP_022940291
UniProt:
A0A6J1FNW1
LinkDB
All DBs
Position
Unknown
AA seq
2053 aa
AA seq
DB search
MASKGPRFKLDHETRAKRQKTQEAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQA
KKVALRASKGMIDQATREERKLKEEEQRLRKLALNISKDVKKFWMKIEKLVLYKHQMELD
EKKKKALDKHLEFLLGQTERYSTMLAENLVETYKPSQVDSTHEPHNVHLQEMDENKAVET
TELNVEHEADSVDFDEEFDVRSDDESEDNEQTIDEDEALITEEERQEELEALQNEVDLPL
EELLKRYAREKDDLEVSPETSTAGTEETEVEENHERGNECSTSHKVDEMDSLSFAGRRCN
QSNGESSCVENHMKRETCRTKRPSMLPMEFPKDDAFYDFSEEREDDDYDVAGGEEKDDEA
TLSEEEKLEKVDSNNADDEILMLRNESEIPIEELLARYGKGPNNGYDSDYEDENASALSD
DLVDSSSYEEIEPKPLNVCVHENIDPGKSHSSASSPPERKGSLENSEERESEDRIFDAAA
AARSAQPTGNTFSTTKVRTKFPFLLKHSLREYQHIGLDWLVTMYEKRLNGILADEMGLGK
TIMTIALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKR
QGWMKLNSFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKR
RILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVLDRL
HNVLRPFILRRLKRDVEKQLPKKYEHVLNCRLSRRQRHLYEDYIASSETQATLASGNFFS
MINVIMQLRKVCNHPDLFEGRPIISSFDMAGIVMQLSSSVCSALSPDLFSRVDLKGLGFL
FTHHDFSMTSWERDEVRAIATPSNLIKCSTNVNKSEEIGSGFRYRKRLHGSSIFADIQNA
IMEERVRQAMERAEAIAWWNSLKCDKKPIYSASLRDLVTIRHPIYDIYHEKANPSSYCYS
SKIANIVLSPVERFQMMMGLVESFTFAIPAARAPPPLCWCSGSRSDVFMHPSYVQNCSRL
LFPLLTPIRSAIIRRQVYFPDRRLIQFDCGKLQELAILLRKLKSEGHRALIFTQMTKMLD
ILEAFINLYGYTYMRLDGSTQPEERQTLMQRFNTNPKFFLFILSTRSGGVGINLVGADTV
IFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDNLVIQS
GSYNTEFFQKLDPMELFSGHRSLAIKNMQKEKNHTISSNEVSVSNADVDAALKFVEDEAD
YMALKKLEEEEAVDNQEFTEEVIGRMEDDEFMNDDEIKLDEGGDQAGGITMSNKDNEAII
RGGNDLNEEKAVIVANKEDDVDMLADIKQMAAVAAATGQTISSIDDQLRPIDRYAIRFLE
LWDPLRDKAAMDSDVQFEETEWELDRLEKYKEEMEAEIDEDEEPLVYESWDADFATEAYR
QQVEVLAHHQLMEDLEYEAKRKEEEEAENCDPTRNATPSELKPKSKKKSKKAKFKSLKKG
SLSSELKSVKKEMSVEFMSTDDEDLCSEDVLESLSAQSSLQKKRKRGEFSLDSETGKSLK
KKSKKFKKNIADAFPLDLHLSESGVQYDEAIEIKPRETGADLEHKLVGRSRMGGKISITS
MPVKRVLMIKPEKIKKGNIWSRDCIPSPDFWLPQEDAILCAMVHEYGSHWSMISSTLFSM
TAGGFYRGRYRHPVHCCERYRELIQRYVISAPDNPNSEKTTNASSGKALLRITEEHIRVL
LDVAAEQPDSEYLLQKHFTALLSSVWKARIRGNRGFDTSLARNGLYSGGRYFPTGNHITR
YLGRETTGKLKFGNTSHNCKLIAAALNDAGCTRTDDKKSLSYHGGRASVATEQLELTLEF
EGENDINVSFPSSINLTVSDAVDLSPINLDAVESSGARRVTEVAEIRFRDAARTCNEDFH
GWASSVFPITDLKARSVPKSQSLGKHKLGGVTESSKSSKSKFRKAGPDHGESSHTIADPV
MYQMPSLIIQEDVHNLYSLSSPILTDDSFPFGMDEYPFLQDEPGTLEIVPDNDYILGSIS
GFDTIGPDFTDIG
NT seq
6162 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaaaggtcccaggtttaaacttgatcatgagacaagagccaagcgtcaaaag
acacaggaagctccaagagaacctaatcgacctaaaacacattgggatcatgttttagaa
gagatggtttggctttcgaaggactttgagtctgagcggaaatggaaattagctcaggca
aaaaaggttgctctaagagctagcaaaggcatgattgatcaagctacacgggaagaaagg
aagttgaaggaagaagagcagcggttgagaaaacttgctctcaatatttcaaaggatgta
aagaagttctggatgaaaatagaaaagctggtgctttacaagcatcagatggagcttgat
gagaaaaagaaaaaggcgcttgacaaacacctcgagtttcttttagggcaaacagaaagg
tactcaacaatgctggcagaaaatcttgtggaaacttataaaccatcgcaggtggattct
acacatgagccacacaatgttcacttacaagaaatggatgaaaataaagctgttgaaacc
acagagttaaatgttgaacacgaggcagactctgtggactttgatgaagaatttgatgta
agatcagatgacgaatcagaagataacgagcagaccatagatgaagatgaggctctgata
actgaagaagaaaggcaagaagaactggaagccttgcaaaatgaagtggatcttcctctt
gaagagcttcttaaaagatatgcacgagagaaagatgatttagaagttagtcctgaaacg
agtacagcaggaaccgaagagacagaagtagaagaaaatcatgaaagagggaatgagtgt
tctacgtcgcataaggttgatgaaatggactcacttagttttgccggtcgtcgttgtaat
caaagcaatggggaatcatcttgtgtagaaaatcatatgaaaagagagacttgtcgaaca
aaacgtccatccatgctaccgatggagtttcccaaggatgatgcattttatgatttcagt
gaagaacgtgaagatgatgattatgatgttgctggtggagaagaaaaggatgatgaagca
actttatcagaggaggagaaactagaaaaagttgattcaaacaatgccgatgatgagatt
ttaatgctgcgaaatgagagtgaaatacctatagaagaactgcttgcaaggtatggaaag
ggtcccaacaatggttatgattcagattatgaagatgaaaatgcttctgctttgtcagac
gaccttgtggattcttcatcttatgaagaaattgagccaaagcccctcaatgtctgtgtg
catgaaaatattgaccccggtaaatctcattcatctgcaagttcacctccggagaggaaa
ggatcattagaaaactctgaagaaagggagagtgaggacagaatttttgatgctgcagca
gcagcacgatctgcacaacctactgggaacacattttccacaactaaagtgcgtacaaaa
ttccctttccttcttaagcactccctacgtgaatatcaacatattggcttggattggctt
gtgaccatgtatgagaaaagactaaatgggattcttgctgacgaaatggggcttgggaag
acaatcatgaccattgccttgcttgctcatcttgcttgtgaaaagggaatatggggtccc
catcttattgtggtcccaacaagtgtcatgcttaattgggagactgaatttcttaagtgg
tgtcctgcttttaaaattttaacttactttggaagtgcaaaagagcgcaagtttaagagg
caagggtggatgaaactgaactcatttcatgtatgcataacgacttacaggttggttatc
caggattctaaagttttcaaacgcaagaagtggaagtatctaatactagatgaagctcat
ctaattaagaattggaagtcacaaagatggcaaactcttttgaacttcaattccaagcga
cgaattttattaactggtaccccgcttcaaaatgatctgatggagctctggtccttgatg
cactttttgatgccccatatttttcagtctcatcaagaattcaaggattggttttgcaat
ccaatttcaggaatggtggaggggcaagaaaaagtgaataaggaagttcttgatcgtctg
cataatgttctccgcccctttatacttcgtaggctgaaaagagatgtagagaagcagctc
ccaaagaaatatgagcatgttttgaactgtagattgtctagaaggcagcgtcatttatat
gaggactatattgctagttcagaaacacaagctactcttgccagtggcaatttctttagt
atgattaacgttattatgcagcttaggaaagtttgtaatcatcctgatttgtttgagggt
cgtccaatcatcagttcttttgatatggcgggtatagtcatgcagttgagttcatctgta
tgttctgcattatcacctgacctattttctagagttgaccttaagggtttaggattttta
ttcactcatcatgactttagcatgacttcatgggagagagatgaagttagagctattgct
accccatcaaatttaattaagtgctctaccaatgtgaataaatctgaggaaattggatct
ggatttagatatcggaagagattgcatggatcaagtatttttgcagacattcaaaatgca
attatggaggaaagagtaaggcaggcaatggaacgagcagaagctatagcttggtggaat
tccttgaaatgtgacaaaaagccaatttattcggcatccctcagggatttagtgacgata
aggcatcccatctatgatatataccatgagaaggcgaacccttcatcctattgttattcc
tcaaaaattgctaacattgtcctttcaccagtggaacgtttccagatgatgatgggctta
gttgaaagctttacctttgcaataccagcagcacgggcccctccacctttgtgctggtgc
agtggaagccgttctgatgtgtttatgcatccttcttatgtgcaaaactgctcccgactc
ctgtttccccttctaactccaatcagatctgcaattattcggaggcaagtgtattttcca
gacaggaggctgatacaatttgactgtggaaaattgcaggaacttgctattctactcagg
aaactaaaatctgaaggtcaccgtgcattaatattcacccaaatgacaaagatgcttgat
atcttggaggctttcatcaatctgtacggttacacttacatgcgtctggatggatccact
cagcctgaggagagacagacattaatgcaaagatttaacaccaacccaaaatttttcctt
ttcattttatcgactcgtagtgggggtgtaggtattaatcttgttggtgcggatactgtt
atcttttacgatagtgattggaaccctgctatggatcaacaagctcaagatcgctgtcac
cgcataggacagacgcgtgaagtccatatatatcgcctgattagtgagagtaccattgaa
gagaatattttgaagaaggcaaatcagaagcgtgctcttgataatcttgttattcaaagt
ggtagttacaacactgaattcttccagaagcttgatcctatggagttgttctctggtcac
aggtctcttgccattaaaaatatgcagaaagaaaaaaatcataccatcagttcgaatgaa
gtttctgtatctaatgcggatgtggacgctgctttaaagtttgttgaagatgaagctgat
tatatggctttgaagaaacttgaagaagaagaagctgtggataatcaggaatttacagaa
gaggttattgggaggatggaagatgatgagtttatgaatgacgatgaaattaagcttgat
gaaggtggagatcaagctggtggcattactatgtcaaataaagataatgaggcaataata
cgtggaggtaatgatcttaatgaagagaaggctgtaattgtagctaacaaagaagatgat
gttgacatgctggcagacatcaagcaaatggctgctgtagctgctgcaactggacaaacc
atctcgtccattgatgatcagctacggccaatagatcggtatgcaatacgttttctggaa
ctgtgggaccctttacgtgataaagcagctatggactctgatgtccagtttgaggagaca
gaatgggaactcgaccgtcttgagaagtataaagaggagatggaagccgagattgatgaa
gatgaagagcctcttgtatatgaaagttgggatgctgattttgcaactgaagcatataga
cagcaagtcgaggtcttggcacaccatcagttgatggaggatttggaatatgaagctaag
cggaaagaagaagaagaggctgaaaattgtgatcctacaaggaatgcaacacctagtgaa
ctaaaaccgaagtctaaaaagaaatcaaagaaagccaagttcaaatctctaaagaagggt
tctctttcttctgagctgaaatcagtgaaaaaagaaatgtccgtggaattcatgtctaca
gatgatgaagatttatgtagtgaagatgttcttgaatctttatcagctcagtcaagctta
cagaaaaaacgtaaaaggggtgagtttagtctggacagtgagacaggaaagtccctgaag
aagaaatctaaaaagttcaagaaaaatattgcggatgctttcccactagatctccatctc
agtgagtcaggagtgcaatatgatgaagctatagaaataaaaccacgggagactggtgcg
gatctcgaacataaattagttggtcgtagtagaatgggaggaaaaatatctattacttcc
atgccagtaaagagagttctaatgataaaaccagagaaaataaagaaggggaacatttgg
tcaagggactgtattccttcccctgacttttggttgccacaagaggatgcaatattgtgc
gcgatggtacatgaatatggttcgcattggagcatgattagttcaaccttattcagtatg
actgctggtgggttttatagagggagataccgacatcctgtccattgttgtgagaggtat
agggaactcatacaaaggtatgttatatctgcaccagataatccaaatagtgagaagacc
acaaatgctagctctggaaaagctcttctcagaatcacagaggaacatattcgagtactg
ttagacgttgctgctgagcagcctgatagtgagtacctacttcagaaacatttcactgcc
ctgctctcatctgtgtggaaggcaagaatacgtgggaaccgtggtttcgatacttcactt
gctaggaatggtctctattctggtggaaggtactttccaactggtaaccatattactcgg
tatttggggagggaaactacagggaagttgaaatttggcaacacaagccacaattgtaag
ttaatagctgctgcacttaatgatgctggttgtacgaggacggatgataagaagtccctt
tcctatcacggggggcgtgcatcagtcgctacagaacagttggagctaacactcgagttt
gagggagagaatgatattaacgtgtcattcccatcctcaattaacttaacagtatcggat
gcagttgacttgtccccgatcaacctggatgctgttgagtcttctggcgctcgaagggta
acagaagtcgcagagattcgtttcagggatgctgctagaacttgtaatgaagatttccac
gggtgggcttcatctgtgttccccataaccgatctcaaggctcgctctgtgccaaaatca
cagtcacttggaaagcataagctgggaggagtcactgagtcttccaagtccagtaaatcc
aagttcagaaaggcaggacctgaccacggggagagttcccacacgatagctgacccagtg
atgtaccagatgccatctcttattatccaggaggacgtccataacttatattccctcagc
tcaccaattctcacagacgattcattcccatttggcatggatgagtatccattcctacaa
gacgaaccagggactctagagattgtccctgacaacgactacatcctgggatcgatttca
ggtttcgacacgataggccccgacttcacagatattggttag
DBGET
integrated database retrieval system
