Cucurbita moschata (crookneck pumpkin): 111447040
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Entry
111447040 CDS
T05248
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmos03041
]
111447040
Spliceosome [BR:
cmos03041
]
Complex A
Other components
Complex A specific factors
111447040
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Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
RRM_1
KH_1
eIF3g
RRM_5
PHD_4
zf-CCHC
DUF6319
RapA_C
Motif
Other DBs
NCBI-GeneID:
111447040
NCBI-ProteinID:
XP_022941771
UniProt:
A0A6J1FM08
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MDSLNSNPNPNSAIETLVPYPPDYSTPENFEDHDRDSSIPPTSDYHNSSLFSGQEAQDFQ
GRNSSISHGENPGFSSGNGYADNQAADGAHIGANNVPKVEIQRPLLSENGFTNTHSGTDK
DFSGGEEETTSRRRRRSRWDPQPESNDQSGGESGSGTRKRKSRWADDEPKPVIQLPDFMG
GIEFDPEIQALNSRLLEISRMLQSGMPLDDRSEGARSPSPEPIYDNMGIRINTREYRARE
KLNTERQEIISQIIKKNPAFKPPADYRPPKLQKKLYIPMKEYPGYNFIGLIIGPRGNTQK
RMEKQTGAKIVIRGKGSVKEGRLQQKRDLKHDPAENEDLHVLVEAETQESLEAAAEMVEK
LLQPVDEVLNEHKRQQLRELAALNGTIRDEEFCRLCGEAGHRQYACPSRTSTFKSDVLCK
ICGDGGHPTIDCPVKGTTGKKMDDEYQNFLAELGGTIPESATKQTPTLAIGSGTSGNNPP
WANNTTSASNASQAGVGANGVKPAKEYDDTNLYIGYLPPTFDDDGLIRLFSTFGDIVMAK
VIKDRVSGLSKGYGFVKYSDVQMANNAIASMNGYRLEGRTIAVRVAGKPPQPTVPPCPPA
SAVPTYPVSSQPVGVYPSQQFMPGGPLGNVPPPSNYAGTPVPWGPPVPSPYASYPPPPPG
SNIYPPVQGQAMPPYGVQYSQVQTAPPGAPSQPVSSGEAQQSFPPGLPSENPISQPTTAY
GSTLYSMPPTAQPSYPPSSYGYPPYYSAASTHPLPMSTSNTDQPQPPSGNVPWSTNPPLP
PPMPSAGNTVSGADAEYEKFMADMK
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggactctctcaactcaaaccctaaccctaattccgccatcgaaaccctagttccttat
cctcctgattattctactcccgaaaatttcgaagaccacgatcgtgactcttctatcccg
cccacttccgattatcacaactcctccttattttcgggacaagaagctcaggatttccaa
ggtcgaaactcctcgatttctcatggtgagaatccggggtttagttctgggaatggatat
gctgacaaccaagcggccgatggtgctcatatcggtgccaataatgtgccgaaggtggag
attcagaggccgctgctgtcggagaatggatttacgaacactcatagtggcaccgacaag
gacttctccggtggcgaagaggagaccacgagtaggcgccgacgtcggagccgatgggac
cctcagcccgagagtaatgaccagagtggtggtgaatctgggagcggtacgcggaagaga
aagtctcgctgggctgatgatgagcccaagccggtaattcaacttcctgattttatggga
ggtattgagttcgaccctgaaattcaagctttgaatagtaggcttcttgagatcagtaga
atgttgcaatctggtatgcctctggatgatcgctctgaaggtgctcgttcgccttcaccg
gagccaatatatgacaatatgggaataagaatcaatactagggagtaccgtgctcgagaa
aaattgaacacagagagacaagagataatttctcagataattaagaaaaatcctgcattt
aagcccccagctgattacaggcccccgaagcttcagaagaagctttatataccgatgaag
gaatacccaggttacaattttattgggctgattattggtcctagaggaaatacacagaag
aggatggagaagcaaactggcgcaaaaattgtaattaggggcaaagggtctgtaaaagaa
ggtagattgcaacaaaagagggacctaaagcatgatccggctgagaacgaggatttgcat
gttctagttgaggctgaaacgcaggaatcactagaggctgcggcggagatggtagagaag
ctcttacaacctgttgacgaggtcttgaatgagcataagaggcagcagcttagggaactt
gctgccttgaatggaaccataagggatgaagaattctgtaggttgtgtggcgaggccggg
caccgtcaatatgcatgcccctcgcggacttcaacatttaagagtgacgtactttgtaaa
atatgtggcgatggtgggcatccgacaattgattgcccagtgaagggaaccactgggaaa
aagatggatgatgaatatcagaatttcttggcagagttgggaggcacgattccagaatca
gcaaccaagcagacccctacactggcaataggttcaggcacttcaggaaacaatcctcct
tgggctaacaatacaacaagcgccagcaatgcttcacaagctggcgttggtgcaaacggt
gtgaaacctgctaaggaatacgacgatacaaacttgtatataggctatttgcctccaact
tttgatgatgatggtttgattagattattttcaacatttggtgatattgtgatggctaag
gttattaaggatcgggtttctggattgagcaaaggttatggatttgtaaagtattctgat
gttcagatggcaaataatgcaattgccagcatgaatggttatcgactagagggccgaaca
attgctgttcgagttgctgggaagccaccgcagcctactgtacctccttgcccaccagca
tcggctgtgcccacttatccagtttcaagccagcctgttggtgtctatccatctcagcag
tttatgccgggtggtcctcttgggaatgttcctccaccttcaaattatgcaggaactcca
gttccatggggtcccccagttccttctccatatgcttcttatccccctccacctccaggt
tctaacatctatccgccagttcagggtcaggccatgcctccttatggcgtccagtattct
caagtccagacagcgccccctggtgctccatctcaaccagtgtcttcgggtgaagcacaa
cagagttttccgccaggattgccatctgaaaaccctattagtcagccaactactgcatac
gggagcactttatattcgatgccaccaactgctcaaccctcttacccgccttcttcatac
ggttacccaccttattatagtgcagcttctactcatccactacccatgtctacatcaaat
acggatcagcctcaaccacccagcgggaatgttccttggtctacaaatcctccattacct
cctcctatgccttctgcagggaatacagtatcaggtgcagatgctgagtatgaaaagttc
atggcagatatgaaatga
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