Cucurbita moschata (crookneck pumpkin): 111449522
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Entry
111449522 CDS
T05248
Name
(RefSeq) RNA-binding protein 25-like isoform X1
KO
K12822
RNA-binding protein 25
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111449522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmos03041
]
111449522
Spliceosome [BR:
cmos03041
]
Complex A
U1 snRNP components
U1 related factors
111449522
Complex B
111449522
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
111449522
NCBI-ProteinID:
XP_022945211
UniProt:
A0A6J1G083
LinkDB
All DBs
Position
Unknown
AA seq
968 aa
AA seq
DB search
MADSSSPPATLDSNPQAAEPENPNPQAKKPESAASSFPPTQSLPPAPISVGINPTLHSPL
VSTPQPPPSLSYGPPPGTVAVPPTAPSFRPVPLGVHQFSPMPGTGMLNPSYPNPGVQPPG
VSSVPAPASGMASGVTGAVPVPAPQQMMAYQVPPGQVPNPAMRPYATMPNGFAAATPQGA
FLPPGVPRFASPFPGMIRTPFPPRPPGAMGMMPGMPRPPIPGIPGVRPIIPPVVRPAILP
SVTPAEKPQTTIYIGRIAQSVENDFMLSLLQLCGPVKSWKRAQDPSDGTPRTFGFCEFES
AEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKRYVEKKAENSKKLKETQVSETKEEEA
DAANVAKNETSKPPAEDSKEDRDSGEKEDHDIACSAVLSDEDREADREASEKLTNALEER
LKSRPLPPPPLLTTADVSGNSSAEPSAKLKDGEYDVDILKSDAADDRNDDDSTSDNKQTS
EQHDKPETSSPDRSRRYDRRSRERDRERDLKRDKEREIERYERETERERARKEREQRRKI
EEIERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRR
GALEEKRKKRSREKEDDSVDRQREEEEIAEAKRKAEEEQLQKLRDPPKLLPVQMMNINEK
IVLPEEPANEIKFLTSERDSELDSGRENHIGDGFLQNGSGDELNIIPSETRQSECLPAKR
LGFGIVGSGKRTTVPSVFHEEDDEAQKEKKMRPLVPIDYSAEELQAVQPSSTGALPPNLA
AAAEFAKRISNVNSKEEKPDSERERGRRPSERSSQRDRDRNDEDTYRSKDENKTTDRDRE
RDRVLDKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKHALHERMRPWISKKI
TEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVET
GLAFRSKA
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggcggactcttcttctccccctgcaaccctcgattcaaatcctcaagctgccgagccc
gaaaaccccaatccacaggccaagaaacctgaatctgccgcttcttcttttcctcctacg
caatcgttaccaccagcaccgatttcggttggaataaaccctaccttgcattcgccgttg
gtgtccacgccgcaaccgcctccttctttatcgtatggcccgccgcccggtactgtggct
gttcctccgacggctccgtcttttcggccggtgcctctcggagttcatcagttctcgcct
atgcctggcactggcatgctgaacccaagctatccaaaccctggggttcagcctcccggt
gttagttcggttccggcgcctgcttctggtatggcaagtggcgttacgggagctgttcct
gttccagcgccacaacagatgatggcttatcaagttccaccgggtcaggttccaaatccg
gcgatgaggccgtacgccactatgcctaatggtttcgcagctgctactcctcaaggagca
tttcttccccctggagttcctcgttttgcttctccatttcctggtatgattcggacacct
tttcctccacgcccacctggtgctatgggcatgatgccaggaatgccacggcctcctatt
ccagggattcctggtgttcgtccaatcatccctcctgtggttagacctgctattctccca
agtgtcacacctgctgaaaaaccacaaactacaatttatattggccgaattgctcaatca
gtggaaaatgatttcatgctgtcccttcttcagctatgtggaccagtgaagagttggaaa
cgggcccaagatccttcagatggaactcctagaacctttggattctgcgagtttgagtct
gctgaaggtgttcttcgtgcactacgattactgacgaagttaaacattgatggacaagag
ctagtgctaaaaggtactcaagcaacaagagattatctgaagcgttatgttgaaaagaaa
gcagagaattcaaaaaaactgaaagaaacacaagtttcggagactaaggaagaagaagct
gatgcagcgaatgtggcaaaaaatgaaacttcaaagccccctgcagaggattcaaaagag
gaccgtgattcaggggaaaaggaagatcatgacattgcctgttctgcagttttaagtgat
gaagatagagaggctgatcgagaggcatcagaaaagcttacaaatgctctggaggagagg
ttgaagtctagacctctgccaccacctcctctactgacaactgctgatgtttctggaaat
tcaagtgcagagccatctgctaaactgaaagatggtgaatatgacgttgatattttgaaa
agtgatgcagctgatgatagaaatgatgatgattcaactagcgacaataaacaaactagt
gagcagcacgacaagcctgaaacaagctcacctgatagaagtagaaggtatgacaggaga
agtcgagaaagagacagggagcgagatttaaaaagggacaaggagcgggaaattgagaga
tatgaaagagagacagagcgggaacgagctaggaaagagagggaacaaagaagaaagatt
gaagagattgagcgacagtatgaagaatgtcttaaagagtgggaatatcgagaaagagag
agagaaaagcagaggcagtatgagaaggagagagagaaagagaaagagcgtaaaaggaag
aaagagatattgtatgatgaagatgatgaggatgatgattcaagaagaaaatggcgcaga
ggtgctctggaggaaaagaggaagaagagatctagagaaaaggaagatgattcagttgat
agacagagagaggaagaagaaattgccgaggccaaaagaaaggccgaggaggaacagctg
caaaaactgagagatccaccaaaacttctacctgttcagatgatgaatatcaatgagaaa
attgttcttcctgaagaacctgctaacgagattaaatttttgacttcagaacgtgattct
gagcttgactcgggccgtgagaatcatataggggatgggtttttacaaaatggtagtggt
gatgaactaaatataataccatcagagacccgtcagagtgaatgcttgcctgcaaaaagg
ttaggatttggtatagtaggttccggaaaacggactactgtaccttcagtttttcacgag
gaggatgatgaagcacagaaagagaagaaaatgaggccactggttccaatcgattactca
gctgaggaactccaagctgtgcagccttctagtactggggctttgccaccaaatttagct
gcagcagccgaatttgcaaaacgtatatcaaatgtcaattctaaagaagagaagcctgat
agtgaaagggagcgaggaaggcgtcccagtgaaagatctagtcagcgggatagagaccga
aatgatgaggatacctatcgcagcaaagatgagaacaagacaacagacagagatagggag
cgagaccgtgttttggataaagtaaaaacaccagacaacaaaaagctgttggatgcgaaa
cagttgattgatatgattcccaagacaaaggaggaattattctcatacgacataaattgg
gcaatttatgaaaagcatgcattacatgagagaatgagaccgtggatttcgaaaaagata
acagagtttttgggggaagaggaaaccactcttgtcgattacatagtttcgagtactcag
gaacacgtaaaagcatctcaaatgctggagctgcttcagtcaattttggatgaagaagct
gaaatgttcgttctgaagatgtggagaatgcttatcttcgaaataaaaaaggtagaaact
ggtctagctttcagatcaaaagcatga
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