Cucurbita moschata (crookneck pumpkin): 111454564
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Entry
111454564 CDS
T05248
Name
(RefSeq) lysine-specific histone demethylase 1 homolog 3-like
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
SWIRM
HI0933_like
Pyr_redox_2
Thi4
FAD_binding_3
FAD_oxidored
DAO
FAD_binding_2
NAD_binding_9
Pyr_redox_3
MurD-like_N
GIDA
AlaDh_PNT_C
Lycopene_cycl
Pyr_redox
Shikimate_DH
Med26
Motif
Other DBs
NCBI-GeneID:
111454564
NCBI-ProteinID:
XP_022951835
UniProt:
A0A6J1GIL1
LinkDB
All DBs
Position
Unknown
AA seq
1903 aa
AA seq
DB search
MEGDNKKSGFRKRTKPMEGGFDSDDDEPIGSLLKLKRSRNSMKNKVGVDFGGERDKMVDK
KVAKLPVQEEDFGGMDDTLASFRKKLRRPKKVSGFGTSKEQSSGFSRAESSDPISNACRG
RGDLDLSFRPENSESMGREGSDLSSKIDAETVCETPDFELKHMETGISRRRSSNCSFDEQ
LDDSLSAFAQKIQSGSTRKSLVSTTCKPDCKAETSEDKLSNFSRVVSGDQETYPVVSSSS
SAKLAEVAKKSDSELTRPYLISCSCYSRENRNPGLGQCQGVDGDREEIQCGVNNYDNADI
KPCIPNVVADEDGKNFSHIQFGDNFQSLERKVSCETKNQLKHCSCGDTMGLGKSHLNENM
HNSCHALEQANENNGLCGGVSNGDFCDVVAHESTVALSKTTSGVDCEGKDRSLAIHYDEL
PNSANVCESYSKGFCKSTKKLKISNPSSEGTTLSNLELLAAFESMKADKTCCDSGNLDTG
TDEPKTKVGSVQNENALISHRISDSTAVCPVGNCSMISDSQPAKASVEVDGPNNNIPADK
EVKVSSPGSLTPDDNDIEDVISAPGSEKDLKLSALQRVVRKTKKPRRDDMAYEGDIDWEV
LLNERAVDSDYSFRSRRDSTSTTFTEAETGGRAAVSAGLKAHAVSLLEKIKFKEVLKRKG
GLQEYLACRNQILGLWCKDVTRILHLVDCGITETPSMDEPTHFSLIREIYAFLNLRGYIN
AGIASEKAKSESGFKHDCERGEKKVGDISVASAADSEEGISAMVKNSDASNAKNSVSAGC
ELPEDTEGRDLVTANNLELQKFAEHEQELVHDLEYGTHDPSPGKLVGIDVPGEAVAHLAH
HSSNGWHPIGSSNECVGGDEQQQSNSEVRKKVIVIGAGPAGLTAAKHLHRQGFTVNVLEA
RNRLGGRVYTDRSSLSVPVDLGASIITGVEADVATERRPDPSSLICTQLGLELTVLNSDC
PLYDIVTCKKVPVDIDEALEAEYNSLLDDMVLLVAQRGEHAMTMSLEEGLEYALKRRRMA
RLGMDVRSEEEVLSPFERRVMNWHLANLEYGCAAMLKKVSLPHWNQDDLYGGFGGAHCMI
KGGYSTVVESLGGGLNIHLNHVVADISYSTADIGSNVNQCAKVKVSTTNGCEFLGDAVLI
TVPLGCLKAESIKFSPPLPEWKRLSIQRLGFGVLNKIVLEFPEVFWDDSVDYFGATAEET
KWRGQCFMFWNVRKTVGAPVLIALVVGQAAVERQYMSSSDNISHALMVLRKLFGEAVVPD
PVASVVTDWGRDPFSYGAYSYVAVGASGEDYDILARPVENCLFFAGEATCKEHPDTVGGA
MMSGLREAVRMIDVLSTGYDYTAEVEAMEAAQRQSECENDEVGDVITRLDDVKISDALYK
NSMDCAKEALLQDLFSSAKTTAGRLHVAKELLKLPVETLKSFAGTKEGLTVLNSWIMDSM
GKDGTQLLRQCVRILVLVSTDLLAVRLSGIGKTVKEKVCVHTSRDIRAIASQLVSIWLEV
FRKEKAAHGGLKLSKSVSTVESLKRKSNKDSSGRPPLHANNSTLDSRGNLQTSTIHLPSD
VNTKNDNSKQLKLEMENSSKSDISSSRSRGSLGKQDAEMEDNNIAMTEEEEAAFAVAEAA
RAAALAAAKAYASSEAKCALQLPKIPSFHKFARKEHCAQMDECESKRKLSGSVLGRQDCI
SEIDSRNCRVRNWSVEFSAACVNLESSRMSADNLSQRSHSNEIVSQLNFREHSGESAPVD
SSIYTKAWVDTAGSVGMKDYHAIERWRSQAAAAHVNDEEDSNTAGNKPTWNSDQLANESS
ISQVTINKEPLRNHHRGADRIKQAVVDYVASLLMPLYKARKIDKDGYKTIMKKSATKVME
QATDAEKGMTVSEFLDFKRRNKIRAFVDKLIERHMATKPVMDS
NT seq
5712 nt
NT seq
+upstream
nt +downstream
nt
atggagggagacaataagaagtctggttttaggaaaagaacgaagcccatggagggtggg
tttgactcagatgatgacgagcctattggatctctgctgaagttgaagagatcacgaaac
tccatgaagaataaggtaggtgtagattttggcggtgaaagagacaagatggttgacaag
aaagtagcgaagttgccagttcaagaggaggactttggggggatggatgatactttagca
agtttcagaaagaagttgaggcgtcctaagaaggttagcgggttcggaacatctaaggaa
cagagttctggttttagtcgggcagaatcatcagatccgatatcgaacgcatgcagagga
cgaggggatttagacttgagttttagaccagaaaatagtgaatcaatgggccgtgaaggg
tctgatctatcttcaaagattgatgcagaaacggtgtgtgaaacacctgattttgaatta
aaacacatggagacaggtatctctaggaggagaagttctaattgctcttttgacgaacag
ttggatgattcattgtcagcatttgcccaaaagattcaatctggttcaactaggaaatca
ttggtatcgacaacatgtaaaccggattgcaaggctgagacttcagaagataaattgagt
aacttttctagagttgtatctggggatcaagaaacctaccctgtagtgagttctagttct
tctgctaagctggcagaggtggccaaaaaatcagattctgaacttactaggccatattta
atatcctgttcctgttacagtagagaaaatcgtaatcctggtctaggacaatgccaaggg
gttgatggagaccgagaagaaattcaatgcggtgtaaataattatgataatgctgacatc
aaaccatgcataccaaacgtagttgctgatgaagatggcaaaaactttagtcatattcaa
tttggggacaatttccagtcgctggaaaggaaggtctcctgtgaaacgaagaatcaacta
aaacattgctcatgtggcgatacgatggggctaggtaaaagtcatcttaatgaaaatatg
cacaattcttgtcatgccctagaacaggcaaatgaaaacaatggcctttgtgggggtgtt
tccaatggagatttttgtgacgtggtggcccatgagtccacagtcgctttgtctaaaaca
acttcaggtgtagattgcgaaggaaaagacagatcactggctatacattatgatgaattg
cctaactccgccaatgtttgtgaaagttattccaaaggtttctgtaaatctactaaaaaa
ttaaagatttctaatccttcttccgaaggaactacactctccaatcttgaattgttggca
gccttcgagtcgatgaaagcggataaaacttgctgtgactctggtaatttagatactggt
actgacgagccaaagactaaagttggttctgtgcagaatgaaaatgctctgatctctcat
aggatttcagattcaactgctgtctgcccagttgggaattgcagtatgatatcagatagt
caaccagccaaggcttctgtagaggtagatggtccaaataataatatacctgctgataaa
gaggtcaaggtatcttctcctgggtctctgactccagatgataatgacattgaggatgta
atatctgctcctggaagtgaaaaagatttaaagctttcagctttgcaacgtgttgtgcgc
aagacaaagaagcctagacgtgatgacatggcttatgaaggagatattgattgggaggtt
ttgcttaatgagcgtgcagttgatagtgactattcttttagatcaagaagggattctact
tcaacaacttttacggaggcggaaactgggggtagagctgctgtgtctgcagggcttaag
gctcatgcagttagcctacttgagaagattaaatttaaggaagtgcttaagagaaaaggt
gggcttcaagagtacttagcgtgcaggaatcagatcctgggcctttggtgtaaagatgtt
actcgcattttacatctcgttgactgtgggatcactgaaactccctctatggatgaacca
acgcatttttcccttattagggagatctatgcgtttcttaatcttcgtggttatataaat
gcgggaattgcttctgaaaaagccaaatcagaatctggcttcaagcatgactgtgaacgg
ggagaaaagaaagttggagacattagtgttgcttcagctgctgattctgaggaaggcatt
tctgccatggttaaaaattctgatgcttctaatgccaagaacagtgtttcagctggctgt
gaactaccagaagatactgaaggaagagaccttgtgactgcaaataatctggagttgcaa
aaatttgcagaacacgaacaagaattggtacatgacttggagtatggtactcatgatcct
tcaccgggaaaattggtaggtattgatgttccaggtgaagctgtcgcccatttagctcat
cattcaagtaatggttggcacccaattggctcctctaatgagtgtgtagggggtgatgaa
caacagcagagtaattcagaagtcagaaaaaaggtaattgttattggagctggccctgct
ggcttgactgctgccaagcacttgcatcgtcagggctttactgtcaacgtacttgaagcc
aggaatagattaggaggtcgtgtttatacagatcgctcctctctttcggttcctgtagat
cttggtgcaagtattattacaggagtagaggctgatgttgcaactgaaagaagacctgat
ccttcttcattgatttgcactcaattgggccttgagttgactgtgttaaatagtgactgt
cctctctatgatatcgttacatgcaaaaaagttccggtagacattgatgaagctttggaa
gcagaatataatagtcttcttgatgacatggtgttgcttgttgcacaaagaggggagcat
gcaatgaccatgtctcttgaggagggtctagaatatgcccttaagcgacgacgcatggct
cgattgggaatggatgttcgttccgaggaagaagttttgagtccctttgagaggcgagtt
atgaactggcatttggctaacttggagtatggttgtgctgctatgctgaagaaagtatcg
cttcctcattggaaccaggatgatctttatggaggttttggaggagctcattgtatgatc
aaagggggttatagcactgttgttgaatctcttggtggaggactcaatattcacctaaac
catgttgtggctgatatttcttacagcaccgctgatattgggtcgaatgtaaatcaatgt
gcgaaggtaaaagtttccacaaccaatggatgtgagtttctaggagatgctgtccttatt
actgtgcctcttgggtgtttgaaagcagaatctattaagttttccccaccattgcctgaa
tggaagcgtctgtccatccagcgccttggttttggagttcttaacaaaattgttcttgaa
tttccagaagttttctgggatgactctgtggattattttggggcaactgcagaggaaaca
aagtggagggggcagtgtttcatgttttggaatgtaagaaaaacagttggtgctcccgtt
ctcattgcgctagtggttggtcaggcggctgtggagaggcaatacatgagctcttccgat
aacataagccatgcattaatggttcttcgcaaactttttggagaagctgtggtgcctgac
ccagttgcatctgtggtaacggattggggaagagatccgtttagttatggtgcttactcc
tatgttgctgttggagcgtctggagaggactatgacattttagccaggcctgttgaaaac
tgtttgttttttgctggtgaagctacatgcaaggagcatcctgacactgttgggggtgca
atgatgagtggtctaagagaggctgtacgcatgattgatgtattgagcactggttatgat
tatacagcagaagtagaggcaatggaagctgctcagaggcagtctgagtgtgagaatgat
gaagttggggacgtaattacacgactcgatgatgttaagatttcggatgctctctacaaa
aattctatggattgtgccaaagaagccttacttcaagacttgttttctagtgcgaaaacg
actgcagggagactgcatgtcgcaaaagagttgttgaaactccctgttgagacattgaag
tccttcgcaggtaccaaagaaggtcttacagttctcaactcatggattatggactcaatg
gggaaggatgggactcaacttcttcggcagtgtgttcgtattcttgttctagtttcaact
gatctacttgcagttcgcttatcaggcataggtaaaactgtcaaagaaaaggtatgtgtg
catacaagccgtgacattcgcgccattgcgagtcagttggttagcatttggcttgaagtt
ttccgtaaagaaaaagctgctcatggggggttaaaactctcaaagtcggtttctactgta
gaatcattgaagaggaaatctaataaagattcttctgggagacctcctttgcatgcaaac
aacagcacactggatagtagaggcaatttgcagacttctacaattcacttgccttctgat
gtcaatacgaaaaatgataatagcaaacaattgaaattagaaatggaaaattcatcaaaa
tcagatatcagttcatcaaggtcaaggggttcattaggaaagcaggatgcagaaatggaa
gacaacaacattgcaatgacagaagaagaggaggctgcctttgctgttgctgaggcagca
cgtgcagcagcacttgcagctgcgaaggcgtatgcatcttctgaagctaagtgtgcattg
cagctccctaaaatcccttcctttcacaaatttgctcgaaaggagcattgcgcacaaatg
gatgagtgtgagtctaaaaggaagttgtctggcagtgtgctaggaagacaggattgtata
tcagaaatagattcaaggaattgcagggtcaggaactggtctgtggaattttctgctgct
tgtgttaatctcgaaagttcacgaatgtctgcagataacctttcgcaaaggagccattca
aatgagattgttagccaattaaacttcagggagcactccggtgaaagtgcccctgtggat
agcagtatatacacgaaagcatgggttgatacagctggcagtgttggaatgaaagattat
catgcaattgagagatggcggtctcaagcagctgcagctcatgtaaacgacgaggaggat
tcaaacactgctgggaataaacccacttggaatagtgatcaattagcgaatgaaagctcg
atatcacaagtgacgatcaacaaggagcctttaagaaaccatcatcgtggggctgacaga
attaagcaggccgtagttgattatgttgcatcactcttgatgcccctttacaaagcaagg
aaaattgacaaggatggatacaagacaattatgaagaaaagtgcaaccaaggtcatggaa
caggctactgatgcagagaaaggcatgactgtttctgagtttcttgatttcaaacgtagg
aacaagattcgtgcctttgttgataaattaatagagaggcatatggctacgaagccagta
atggactcatga
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integrated database retrieval system
