Cucurbita moschata (crookneck pumpkin): 111456423
Help
Entry
111456423 CDS
T05248
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X1
KO
K22803
structural maintenance of chromosomes protein 5
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmos03400
]
111456423
DNA repair and recombination proteins [BR:
cmos03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
111456423
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_29
AAA_21
AAA_27
ABC_tran
Motif
Other DBs
NCBI-GeneID:
111456423
NCBI-ProteinID:
XP_022954044
UniProt:
A0A6J1GRQ5
LinkDB
All DBs
Position
Unknown
AA seq
1053 aa
AA seq
DB search
MAEAKRRAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSS
IVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEENITITRKMDTHNKS
EWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQ
LPILHRVLVEKSHDIKNIERAVEKNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMK
KKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIEKQRKEKAKLDAKTKKY
STLINNNHKKRMELQETENHLGVQVQGKLKEMEDLRKQEESRQQRILQAKEELEAAELEL
QNLPPYKHPKDEIERLRAQILELEVSASQKRLTKSEIEKNISQKRNTLRQCLDKLKDMEN
TNTKLLQALRNSGTEKIFEAYHWLQEHRHEFKKEVYGPVLLEVNVSNRTHADYLEGHIPS
YAWKSFITQDSDDRDIMVKNLGSFGVPILNYVGGERRTNQHFELSEEVRAFGIYSRLDQI
FDAPAAVKEVLTMQFGLEHSYIGSKVTDQKADEVSKLGILDFWTPDNHYRWSRSRYGGHM
SGTVEPVDRSRLLLCNLDAGEIDGLRSRKNELEESISALEENCKSSQTELRLIEDEEAKL
RKHRDDILNTVQHEKRKRREMENRIDQRKKKLESMEREDDLDTVVAKLADQATNFNVQRF
NCAIEIKHLLVEAVSYRQNLTKSHMSSIEIEAKIRELEVNLKQHEKFALQASVQFEYCKK
EVEDYRQQLSVAKKYAESIAVITPDLEKEFLEMPTTIEELEAAIQDNISQANSILFLNHN
VLEEYEHRQRQINTIARKLEADKHELRKCMAEVDELKGNWLPTLRKLVSQINETFSRNFQ
EMAVAGEVLLDEHDMDFDQYGILIKVKFRQAGQLQVLSAHHQSGGERSVSTILYLVSLQD
LTNCPFRVVDEINQGMDPINERKMFQQLVRAASQTNTPQCFLLTPKLLPELEYSGACSIL
NIMNGPWIEQPSRAWSNGDSWGTLMNYVGASRC
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagccaagcgtcgcgcaaagcgccctagaattacgaggggggacgatgattat
atgcctggaagtataattgagattgagcttcataactttatgacctttaaccacttgaaa
tgtaaaccaggatcacgtctaaaccttgtaattgggcccaatggatctggtaaaagctct
attgtatgtgctattgcccttggccttggtggtgagcctcagctccttggaagggcgacc
agtgttggagcatatgtgaagcgcggggaggagtctggttatgtcagaataaccttgaga
gggaatactaaagaggagaatattacaattacacgtaaaatggacacacacaacaaatct
gagtggttgttcaatggaaaagttgtgccaaaaaaggatgtagctggaatcattcaaagt
tttaacattcaagttaataacttgactcaatttttacctcaggacagggtttgtgagttt
gccaaattaactcccgtccaacttttagaagagactgaaaaggcagttggcgatcctcaa
cttccaatcctacatcgtgtacttgttgagaaaagccatgacataaaaaatatagaacga
gctgttgagaaaaatggagacaccctagatcagctaaaggcattaaatgtcgagcaggag
aaagatgttgagcgtgttcgtcaaagagaagaacttttaaaaaaggttgagtccatgaaa
aagaagctgccatggctgaagtatgacatgaaaaaggctgaatacatggaagttaaggaa
aaggaaaaggaggcaaaaaagaagttagatgaagctgcaaatactttgaatgatttaaag
gagccaattgagaaacaaagaaaggagaaggcaaagttggatgcgaaaactaagaagtat
agcactctcattaataataatcacaagaaaaggatggaacttcaggaaactgaaaatcat
ttgggggtgcaagtgcaaggaaaattgaaagaaatggaagacttgaggaaacaagaagaa
tctcgtcaacagagaatcttacaagctaaagaggaacttgaagctgctgaattggaactt
cagaatttgcctccttacaaacatcccaaggacgagattgaacggttgcgcgctcaaatt
ttggagctggaagtttcagcaagtcagaagagacttacgaagtcagagattgaaaaaaat
atatcccaaaaaagaaatactttgaggcagtgcttggataagttaaaggatatggagaat
actaatacaaaactactacaggcattgagaaattctggaacagagaagatttttgaagct
tatcactggcttcaagaacatcgccatgaattcaagaaggaggtgtatggtccagtgttg
ctagaggttaatgtgtcaaatcggactcatgctgactacttagaaggtcatatcccatca
tatgcctggaagtccttcataactcaagattcggacgatcgtgacataatggtaaaaaac
ttgggttcatttggcgttcccatcttaaactatgtgggaggtgaaaggcgcacaaatcag
cattttgagctgtctgaggaggttcgtgcatttggcatatattcccggctagaccaaatt
tttgatgctcctgcagctgtaaaggaggttttgaccatgcagtttggtttggagcattca
tatattggctcaaaggtaactgatcagaaggcagacgaggtctcaaaattgggaatttta
gatttttggactccagataatcattatcgatggtctcgctctagatacggtggtcatatg
tcgggaactgtggaaccagttgatcgctcacgtcttctcttgtgcaacttggatgcggga
gaaattgatgggcttcggtccaggaaaaatgagctagaagaatctatttctgcgttggaa
gaaaattgtaaatcaagtcagactgaactaagattgatagaggatgaagaagctaaactt
cgcaaacatcgggatgatattttaaatactgtgcaacatgagaagagaaaacgccgtgaa
atggaaaatcgcattgatcaaagaaaaaagaaattagaatctatggagcgggaagatgac
ttagatactgttgtggccaagcttgccgaccaagctacaaattttaacgttcaaaggttc
aattgtgcaattgaaattaagcatttgcttgttgaggccgtttcctatagacagaacttg
actaagagccatatgtcctccattgaaattgaagcaaagatcagagaattggaggtaaat
ctgaagcagcatgaaaagtttgctctgcaagcgtcagtgcagtttgagtactgcaagaag
gaagtcgaggactatcgacagcaactctcagttgccaagaagtatgcagaatctattgct
gtgatcacacctgaccttgagaaggaatttcttgagatgcctactacaattgaagaattg
gaagctgctattcaagataatatttctcaggctaattccattctgttcttaaaccataat
gtgcttgaggaatacgaacatcgtcagcgtcagataaataccattgcaagaaaactagaa
gctgataaacatgaactaaggaagtgtatggctgaagttgatgagctgaagggaaattgg
ctcccaactttaagaaaacttgtttctcagataaatgagacttttagtcgcaattttcaa
gagatggctgttgctggagaagtgttattggatgagcatgatatggacttcgatcaatat
gggattcttattaaagtgaagttcagacaagcaggtcagcttcaggttctcagtgcacat
catcagtcgggaggggaacgctcggtgtcgacaatcttgtatcttgtttcccttcaagac
cttaccaactgcccatttagagtagttgacgagataaaccaaggaatggatcccataaat
gaacggaagatgttccagcagttggtgagagctgccagccaaacaaatacaccacagtgc
ttcctactcactccaaagttacttccagaactggaatatagtggggcctgtagtatactg
aatataatgaatggtccttggatcgagcagccctcgagagcatggagcaatggagatagc
tggggaacattaatgaactacgttggagcaagccgatgttga
DBGET
integrated database retrieval system
