Cucurbita moschata (crookneck pumpkin): 111456589
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Entry
111456589 CDS
T05248
Name
(RefSeq) pre-mRNA-processing factor 39-like isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmos03041
]
111456589
Spliceosome [BR:
cmos03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111456589
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_14
Suf
TPR_7
TPR_MalT
TPR_11
Motif
Other DBs
NCBI-GeneID:
111456589
NCBI-ProteinID:
XP_022954297
UniProt:
A0A6J1GQQ2
LinkDB
All DBs
Position
Unknown
AA seq
831 aa
AA seq
DB search
MGDSETVVAQTSDVMGYASAGYVSSGYSDSSANLIPQPGAFQSGITGDFSVSHTSADMGN
GNAYVTDPNSLQQGNHVGEVDATKSDVVMTDHIQNAAVAETSGMETAEVASHDSSLNRSV
AASSVNASSIENGSVIENANDASEEQHFIDGSVPPLSAEEDRLWNIVRASSLDFNAWTSL
IEETEKVAEDNILKIRRVYDAFLVEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV
TYSVDIWLHYCIFALSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR
LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELESSEEAAVDVQTEVGDQVNGEEGRP
DVTEPSFKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV
AELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASDSMDLANNAL
ARASQVFVKRQPEIHLFAARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEHRL
GKLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREIMDKAVGHGEL
SKPLIEALIHYEAIQSSAKRIDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEFLNL
FGDVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLASEKAKIAKSYPSVSSPAQSLMGA
YPTVQNQWAAGYSVQPQAWPPVAQAQGQQWAPGYTQPASYSGYGSTYTNPQVSTSVSQTS
TYATYPPTYPVQPQAYSAQSYAQPTAQATIAPSQQPASVAQPYYGSYYMNG
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgggggacagtgaaactgtagttgcccaaacatctgacgtcatggggtatgcatctgct
ggatatgtttcgagtggctattctgatagcagtgcaaatctaattcctcaaccgggtgct
tttcaatctgggatcactggggacttttctgtttcacatacctctgcagatatgggcaac
ggcaatgcatatgttacggatcccaattctcttcagcaaggaaatcatgttggagaggtg
gatgcgacaaagtcagatgtggtaatgactgaccatattcagaatgctgctgtagcagaa
acttcaggaatggaaactgctgaagtagccagtcacgattcttctttaaataggagcgtt
gctgcctcatcagttaatgcttcatcaattgagaatggaagtgttattgagaatgccaat
gatgcttctgaggaacaacactttattgatggttctgtacctccactatctgctgaagaa
gatagactctggaacattgtgagggccagttctttagactttaatgcatggacttctttg
atcgaagagacagagaaggtggcagaggataacatactcaaaattcggagagtgtacgat
gcatttttagtggaatttcctttatgctatggttattggaagaagtatgcagatcatgag
gcccgttttggatctactgacaaagttgttgaggtgtatgaacgagcagtacatggagtc
acttactcagttgatatttggctgcattactgcatattcgctcttagtacatatggagat
ccagagaccatcagaagactttttgagagaggattagcttatgttgggacagattacctc
tcatttcccctttgggataaatatattgaatacgagtacatgcagcaggagtggggacgc
cttgccatgatatatacacgtatactggaaaatccaaatcaacagttggatcgttatttc
aatagttttaaggagttagctgcaagtcgaccattgtcagaattggagagttctgaggag
gctgctgtcgatgtgcaaacagaggttggtgatcaagtaaatggggaggaaggtcgtcct
gatgtcacggaaccatcgtttaaaactgtaagtgctggcttaacagaagcagaggagttg
gagaagtatatcgccattagagaagaaatctataagaaagctaaagagttcgattctaag
atcattggttttgaaacagctatcagaaggccctactttcacgttcggccactaaatgtt
gcagagcttgataattggcatagttacctggactttatagaacaagaaggagacttaaat
aaggtggtgaaattatacgagagatgtgtgattgcttgtgccaactatcctgagtactgg
atacgatatattttatgcatgcaagcaagcgatagtatggatcttgccaacaacgccctt
gctcgggcaagccaagtttttgtcaagagacaaccagagatccatttatttgctgctcgg
ttcaaggagcaaaatggggatattgctggcgctcgagcctcctatcaacttgtgcatact
gaaatttcacctggccttcttgaagcaattattaagcacgctaatatggaacatcgtctg
gggaagctggaagatgcatactctgtatatgaacaggccatcgccattgaaagaggaaaa
gaacattctcgtgcgttgccactgttatatgctcagtactcgaggtttctgaacttggta
tgtaagaatgaaggaaaagctagagaaattatggataaggcagttgggcatggtgaatta
tccaaaccactcattgaggccttgatacattatgaggcaattcagtcatcagcaaagaga
attgattatttagattcattagttgagaaggtaatagtgcccaatacagagaatgcaacg
gtcgtgagtgcttcaatgagggaggagttatcgagcattttcttggagtttctaaatctc
tttggagacgttcaatcaatcaagaaggctgaggacagacatgcaaagttattcatttca
cataagagtacatcagaacttaaaaaacgcctggcggatgattatctagcttctgaaaaa
gcaaagatagccaaatcctatcctagtgtttcttcaccagcacaatctttgatgggtgct
tatccaactgttcaaaaccagtgggcagctggctatagtgtacaaccacaagcctggcct
cctgtcgctcaagcacaggggcaacagtgggcacctggttacacccaaccggcctcgtat
agtgggtatggaagcacctacacgaatccacaagtgtccacatcggtgtcacaaacctcc
acttatgcgacgtatcctccaacataccctgtccagccgcaggcgtattctgctcagagt
tatgcccaaccgaccgctcaagcaacgatagcgccatcgcagcagccagcttcagtcgct
cagccatattacgggagttactatatgaatggatga
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