Cucurbita moschata (crookneck pumpkin): 111458604
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Entry
111458604 CDS
T05248
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03040
Spliceosome
cmos04141
Protein processing in endoplasmic reticulum
cmos04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111458604
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111458604
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111458604
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmos01009
]
111458604
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmos03041
]
111458604
03009 Ribosome biogenesis [BR:
cmos03009
]
111458604
03110 Chaperones and folding catalysts [BR:
cmos03110
]
111458604
04131 Membrane trafficking [BR:
cmos04131
]
111458604
03051 Proteasome [BR:
cmos03051
]
111458604
03029 Mitochondrial biogenesis [BR:
cmos03029
]
111458604
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmos04147
]
111458604
Protein phosphatases and associated proteins [BR:
cmos01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
111458604
Spliceosome [BR:
cmos03041
]
Complex B
Other components
Prp19 complex
111458604
Complex C
Prp19-CDC5 complex
111458604
Ribosome biogenesis [BR:
cmos03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
111458604
Chaperones and folding catalysts [BR:
cmos03110
]
Heat shock proteins
HSP70 / DNAK
111458604
Membrane trafficking [BR:
cmos04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
111458604
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
111458604
Proteasome [BR:
cmos03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
111458604
Mitochondrial biogenesis [BR:
cmos03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
111458604
Exosome [BR:
cmos04147
]
Exosomal proteins
Proteins found in most exosomes
111458604
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
111458604
NCBI-ProteinID:
XP_022957133
UniProt:
A0A6J1GZC8
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKN
QVAMNPLNTVFDAKRLIGRRFTDPTVQNDMKMWPFKVIAGPGDKPMIVVNYKGEEKQFAA
EEISSMVLTKMREIAEAYLGSSVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEP
TAAAIAYGLDKKASSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRLVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY
TTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFF
NGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI
PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKLVQEAEKFKAEDEEHKK
KVESKNALENYAYNMRNTIRDEKIGGKLAPADKKKIEDAVEQAIQWLDGNQLAESDEFED
KMKELESICNPIIAKMYQGGADMGGVAMDDDTPPSGGSGAGPKIEEVD
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaaagggcgagggtccggccatcggtatcgatctcggtactacttattcctgt
gttggagtttggcagcacgatcgtgttgagattatcgccaatgatcaggggaatcggaca
acgccgtcgtatgttgctttcactgatagcgagcggcttatcggcgatgctgcgaagaac
caggttgccatgaatcctctcaacaccgtcttcgatgcgaagcggttgattggaaggaga
ttcaccgatcccacggtccagaacgatatgaaaatgtggccgttcaaggtcatcgccggt
ccaggtgacaaacccatgattgttgtcaactacaaaggcgaagagaagcagttcgctgct
gaggaaatttcatccatggtcctcacgaaaatgcgtgagatagcagaagcttacctcggt
tcctccgtgaagaacgctgtcgttactgtccctgcttatttcaatgactctcagcgtcag
gccaccaaagacgcaggtgtcattgccggcctcaatgttatgaggatcatcaatgagccc
actgcggcagccatcgcttatggactagacaagaaagcatccagtgttggcgagaagaat
gtactcatatttgatttaggtggaggaacatttgatgtctctcttctcacaattgaggag
ggtatttttgaagtgaaggcgactgccggtgacacccatctcggaggtgaggacttcgac
aacagattggttaaccatttcgtacaggaattcaagaggaagcataagaaggacatcagt
ggaaatccaagggctctgaggagattgaggactgcttgtgaaagggcgaagagaaccctt
tcatccactgctcaaactacaattgagattgattctttgtatgaaggaattgatttctac
acaaccatcactcgtgctagattcgaggagctcaacatggacctgttccgaaagtgcatg
gagccagttgagaagtgtctgagagatgcaaagatggacaaaagcagcgtccatgatgtt
gtccttgttggtggctctacgaggattcctaaggtgcagcagctactgcaggatttcttc
aatggcaaggagctctgcaagagtatcaatcctgacgaggcagttgcttatggggctgct
gttcaagctgctatcttgagtggtgagggaaatgagaaagtgcaggatcttcttcttttg
gatgtcactcctctgtctcttggcttggagactgctggaggtgtgatgacagttttgatc
ccaaggaacaccaccatacccacaaagaaggagcaagtattttccacatactcagacaac
cagcctggtgttcttattcaggtctatgagggcgagaggacaagaaccagagataacaac
ttgctgggcaagtttgaactttccggcattcctccagctccaagaggtgttcctcagatc
actgtttgcttcgacatcgacgccaacggtattctaaacgtttccgctgaggataaaaca
actggacagaagaacaagatcaccattaccaacgacaaaggaaggttgtccaaagaggag
attgaaaaactggttcaagaagcagagaagttcaaggctgaagatgaggaacacaagaag
aaagttgaatcaaagaatgctttagagaactatgcatacaatatgaggaacacaatcaga
gatgaaaagataggtggtaaacttgccccagcagacaagaagaagattgaagatgcagtt
gaacaggccattcaatggctagacggcaaccagcttgcagagtccgacgaatttgaggac
aaaatgaaagaactcgaatctatttgcaaccccatcatagccaagatgtatcaaggtggg
gctgacatgggcggcgtcgcaatggacgatgatactcctccatcaggcggcagtggcgct
ggtcctaagatcgaggaagttgattaa
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integrated database retrieval system
