Cyclobacterium marinum: Cycma_0369
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Entry
Cycma_0369 CDS
T01592
Name
(GenBank) Recombination protein recR
KO
K06187
recombination protein RecR
Organism
cmr
Cyclobacterium marinum
Pathway
cmr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Cycma_0369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmr03400
]
Cycma_0369
DNA repair and recombination proteins [BR:
cmr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Cycma_0369
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Cycma_0369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
RecR_C
RecR_ZnF
Toprim
HHH_5
HHH
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
AEL24148
UniProt:
G0IUF3
LinkDB
All DBs
Position
400572..401192
Genome browser
AA seq
206 aa
AA seq
DB search
MNFPSKLIEDAVTEISRLPGIGKKTALRLTLHLLKQKEPVTTALTDSLLNLRKNIQYCEV
CHNISDSTICSICEGNKRDKSVICVVEDLPDVLAIENTNQYTGLYHVLGGVISPIQGIGP
DELKIESLIKRIDSPSNETPVDEIILALPATMEGDTTSFFITRKLKDKNIKVSSIARGIP
VGSELEYTDEITLGRSILTRIKYSTE
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
ttgaactttccttccaaattaattgaagatgctgtaacagagataagtcgacttcccggc
attggaaaaaaaactgccctacgacttacattacatttgctcaaacaaaaggagcctgta
actacagcgcttacagattcattattaaaccttcgtaaaaacattcaatactgtgaagtc
tgtcacaatatttcagacagtaccatttgcagcatatgcgaggggaataaaagggacaaa
agtgtaatctgtgtggtggaagaccttccagatgtattggctatagaaaataccaaccaa
tatacagggctgtaccatgttttgggaggggttatctctcctatccaaggaattgggcct
gatgaactgaagattgaatcactaatcaaacgcatcgattctcccagcaatgaaactcct
gtcgatgagattattttggcccttccggctaccatggagggtgatactacttcttttttt
atcaccagaaaattaaaagataaaaacattaaagtttcttccatcgccagaggtatacct
gttggaagcgaattagagtatacggatgaaatcaccttagggagaagtattctgactcgc
ataaaatattctacagaataa
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