KEGG   Cyclobacterium marinum: Cycma_1700
Entry
Cycma_1700        CDS       T01592                                 
Name
(GenBank) Alanine racemase
  KO
K01798  Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
Organism
cmr  Cyclobacterium marinum
Pathway
cmr00300  Lysine biosynthesis
cmr00470  D-Amino acid metabolism
cmr00550  Peptidoglycan biosynthesis
cmr01100  Metabolic pathways
cmr01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:cmr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Cycma_1700
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Cycma_1700
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Cycma_1700
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    Cycma_1700
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:cmr01011]
    Cycma_1700
Enzymes [BR:cmr01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.1  alanine racemase
     Cycma_1700
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.10  UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
     Cycma_1700
Peptidoglycan biosynthesis and degradation proteins [BR:cmr01011]
 Precursor biosynthesis
  Amino acid ligase
   Cycma_1700
  Racemase
   Cycma_1700
SSDB
Motif
Pfam: Ala_racemase_N Ala_racemase_C Mur_ligase_M T3SS_needle_F Mur_ligase
Other DBs
NCBI-ProteinID: AEL25454
UniProt: G0IUR2
LinkDB
Position
1991511..1993982
AA seq 823 aa
MQQINFSQFASNQSSLFIPGTPDESILFAVIDSRKIHSGKETLFIALQGSRHAGWEFATD
AYAKGVRNFILPKICPSSLLKKLANANILLSISPLKELQQLAQINREAFRGAVIGITGSN
GKTIVKEWLAQVLSAQFNLWKSPKSYNSQIGVALSALGINPQHQLAILEAGISAPDEMKA
LQEIIQPQLGIFTNIGSAHDENFKDTTSKIIEKCLLFKDVKFLVYNKDQELVSNYLASSF
DPSVRISWSDKPGADYVLSVKPHRNGTKIYMMGKDLRTFTFYTSFRDKASLENLRHVITA
ALSLGMEPLMIQQGLELLHAVDMRLTLKSGLNGCKLIDDSYNNDLAGLELALEFMHQQVT
TSGRKILILSEIQQDGDITATFKKIAWLLGQYDIDLFIGVGKGFEESKALFPCESRCFED
TDSLLKGMETLSLSNDLILIKGARVYKFERIVQKLEALAHETILEINLNALRHNFMHYRQ
KLKVGTKIMVMVKAFAYGGGAAEIGNYLQEIGADYLSVAYTDEGIFLRNNGISLPIMVMN
PGSFHLDLLQTHALEPVVYNLQQLRTLSASIDDYSGELPVHLEFDTGMRRLGMTEEDLDE
VIEILLHNKKIKVAGIFTHLAGADEAIHKDYTLSQLASFEIWSKKLMDNTGCRPLRHCLN
SAGIIRYPEYAHDMVRLGIGLYGIEVNKMEQNKLEPAMVLKTVVSQVKTLAKGATVGYGR
VGKMKTEGEVATLAIGYADGYDRRFSNGNAKVLIKGKLVPILGNVCMDMCMADVTGLNVC
VGDEAILFGEQPSIIDLADKIGTIPYELLTGIGPRVKRQYVLD
NT seq 2472 nt   +upstreamnt  +downstreamnt
atgcaacagatcaatttctctcaattcgcttcaaatcagagtagcctgtttatccctggc
acgcctgatgaaagcattctttttgcggtaattgactccagaaaaattcactccggaaaa
gaaactctttttatcgccctgcaaggatcgagacatgccgggtgggagtttgcaacagat
gcctatgccaaaggtgtgcgaaacttcatcttgcccaaaatatgtcccagctccctccta
aaaaagctggcaaatgccaacatccttctttctatttctcccctaaaggaattacaacaa
ctggcacaaatcaacagagaagccttcagaggagctgttataggaattaccggaagcaat
ggaaagaccattgttaaggaatggttagctcaggtattgtcagcccaattcaatttatgg
aaaagtcccaagagttacaatagtcaaattggcgtagcactttcagctttgggaatcaat
cctcaacatcaacttgccatactagaggcaggtatctcagcccctgatgaaatgaaggca
ctgcaagagatcatccaacctcaactaggcattttcaccaatattggaagtgctcatgac
gagaattttaaggataccacctcaaagatcattgaaaaatgcctcctttttaaagacgtt
aaattccttgtttacaataaggaccaagagttggtaagtaactatttagcctcatctttt
gacccttctgtacgcattagctggtctgataagcccggtgctgattatgttctctcggtt
aagccccataggaatggcactaagatttatatgatgggcaaagacctgcgaacttttact
ttttatacttcattcagagacaaggcttctctagaaaacctgaggcatgtgatcactgct
gcacttagtcttgggatggaacctctcatgattcagcaaggactggaactgctacatgca
gtagacatgaggcttaccctaaaatccggcctgaatggctgcaaactgatcgatgacagt
tataacaatgaccttgcaggacttgaattggctctggagtttatgcaccaacaagtaacc
acaagtggtagaaagattcttattctatcagaaattcaacaagatggagatattaccgct
acttttaaaaaaatagcttggctactaggacagtacgatatagacctttttataggtgtt
ggtaaaggatttgaagaatccaaggccttgttcccttgtgaaagcaggtgctttgaggac
actgactcactcttaaaaggcatggaaaccttgtccctttccaatgatctgatacttatc
aaaggggctagggtttataaatttgagcgaatcgtacaaaaactagaagcccttgctcat
gaaaccattttagaaattaacttaaatgcactccgccacaattttatgcattaccggcaa
aaactaaaagtgggaaccaagattatggtgatggtaaaggcttttgcttatggaggtgga
gctgctgaaatcggaaactatttacaagaaattggcgctgattacctatctgtagcctat
acggatgaaggaattttcctaagaaacaatggtatcagcctgccaatcatggtaatgaac
ccgggaagttttcatttggatttactgcagacccatgctttggagccggtagtttataac
ctacagcaacttcggactttgtctgccagcattgatgattattcaggtgaattacctgtt
catttggagtttgataccggtatgcgaagattaggaatgacagaagaagaccttgatgaa
gtcattgaaatcctactacacaataaaaaaatcaaagtcgccgggatttttacccatttg
gccggagcggatgaagccatccataaagattacaccttatcgcagcttgcttcatttgaa
atatggagcaaaaagttaatggataataccggctgccggcctttgaggcattgcctcaat
tcagcaggaatcattcgatatcccgaatatgcccatgatatggtaagattaggaattggc
ttatatggcatagaagtcaacaaaatggaacaaaataaactagaaccggccatggtcctg
aaaacagtggtgtctcaggtaaaaacgcttgccaaaggagcaacggttggctacggaaga
gtcggaaaaatgaaaacagaaggcgaagtggccacattggcaataggctatgctgatggc
tatgatagaagatttagcaacggaaatgcaaaggttttaattaaaggaaaattggtgcct
attcttggcaatgtttgcatggacatgtgtatggcagatgttaccggtttaaatgtctgt
gtgggagatgaagccatactcttcggtgagcaaccttctatcattgaccttgccgataaa
ataggaaccataccttatgagcttcttacagggattggccctagggtaaagcgacagtat
gtactagactaa

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