Clavibacter sepedonicus: CMS2047
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Entry
CMS2047 CDS
T00678
Symbol
ddl
Name
(GenBank) D-alanine-D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
cms
Clavibacter sepedonicus
Pathway
cms00470
D-Amino acid metabolism
cms00550
Peptidoglycan biosynthesis
cms01100
Metabolic pathways
cms01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CMS2047 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CMS2047 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CMS2047 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cms01011
]
CMS2047 (ddl)
Enzymes [BR:
cms01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
CMS2047 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
cms01011
]
Precursor biosynthesis
Amino acid ligase
CMS2047 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
GARS_A
Motif
Other DBs
NCBI-ProteinID:
CAQ02143
UniProt:
B0REX7
LinkDB
All DBs
Position
complement(2169982..2171097)
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AA seq
371 aa
AA seq
DB search
MTMTARIRVVLLFGGTSSEHSISCATASGVLGAIDRERFEVIPVGITPRGAFTLQEDDAS
ALALDAAALPEVVDDGSRVRWPEDAGSRELTVRDADGTERSLGPVDVVFPILHGTQGEDG
TVQGMLELAGLPYVGSGVLASALGMDKHYAKTVLRAAGIEVAPWTTVSRQEWAADPAGVR
ERAAALGLPAFVKPARAGSSVGVSRVVATDGLDAALEVAFREDDRVLVESGLVGREVECA
ILDEGPGRAPSASVAGEIVVSGRDFYDFDAKYLGADGIDLVCPADMTDAELAELRELSIR
AFRAVDARGLARVDFFLTADGFVLNEINTMPGFTPISMFPACWEASGLAYPDLISRLLDV
ALAWEADAARA
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
gtgaccatgaccgcacggatccgggtggtgctgctcttcggcggcacctccagcgagcac
tccatcagctgcgcgaccgcgagcggcgtgctgggcgcgatcgaccgggagcggttcgag
gtgatccccgtggggatcacgccccgcggcgccttcacgctgcaggaggacgacgcatcc
gccctcgcgctcgacgccgcggccctgcccgaggtcgtcgacgacggctcgcgcgtgcgc
tggcccgaggacgcgggcagccgcgagctcacggtgcgcgacgcggacggcaccgagcgg
tcgctcggcccggtcgacgtcgtgttcccgatcctgcacggcacgcagggcgaggacggg
acggtccagggcatgctcgagctcgccggcctgccgtacgtcgggtcgggcgttctcgcc
tcggcgctcggcatggacaagcactacgcgaagacggtgctgcgggcggcgggcatcgag
gtggcgccgtggaccacggtgtcgcgtcaagagtgggccgccgaccccgcgggcgtccgt
gagcgtgccgccgcgctcgggctgccggcgttcgtgaagcccgcgcgggccgggtccagc
gtgggcgtcagccgcgtcgtcgcgactgacgggctcgacgccgccctcgaggtcgcgttc
cgcgaggacgaccgcgtgctcgtcgagtcggggctcgtcggccgcgaggtcgagtgcgcg
atcctcgacgagggtccgggccgggcgccgagcgcatccgtcgcgggtgagatcgtggtg
tccggccgcgacttctacgacttcgacgcgaagtacctcggcgcggacggcatcgacctc
gtgtgccccgccgacatgaccgacgcggagctcgccgaactgcgggagctgtcgatccgc
gccttccgggcggtggacgcgcgcgggctggcccgcgtggacttcttcctcacggcggac
ggcttcgtgctcaacgagatcaacacgatgccgggcttcacgcccatctcgatgttcccc
gcgtgctgggaggcctcgggcctcgcgtacccggacctcatctcccgcctgctggacgtg
gcgctcgcgtgggaggcggatgccgcccgcgcttga
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