KEGG   Cordyceps militaris: CCM_02533
Entry
CCM_02533         CDS       T03108                                 
Name
(RefSeq) DNA ligase, putative
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
cmt  Cordyceps militaris
Pathway
cmt03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cmt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    CCM_02533
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmt03400]
    CCM_02533
Enzymes [BR:cmt01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CCM_02533
DNA repair and recombination proteins [BR:cmt03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     CCM_02533
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N BRCT_2 RNA_ligase DNA_ligase_A_C BRCT DNA_ligase_IV
Other DBs
NCBI-GeneID: 18164560
NCBI-ProteinID: XP_006667748
UniProt: G3JA92
LinkDB
Position
Unknown
AA seq 1001 aa
MSEAEARAIDDDAEHEEQIQYGSEEARKELDEKYPNRPHNFAKTLLFSDLYRNLFNPLNE
NKRQPTGGVARKKGPRGQTQLSPQEQRRHIIDRFITRWRKEVGPDFYPALRLILPDKDRD
RGVYGLKENAIGKLLVKLMKIDKNSEDGYNLLHWKLPGQTTAARLAGDFAGRCYEAISKR
PMRTEPGTMTIAEVNEQLDKLAASAGESENVRVFETFYNRMNAEELLWLIRIVLRQMKVG
ATEKTLLYLWHPDGESLFSVSSSLRRVCWELYDPAVRLESEGASLTLMQCFQPQLAQFQT
PASFKKMTELLRPTPDDPEFWIEEKLDGERMQMHMMEDPSTPGGKRFCFWSRKAKEYTYL
YGHGFHDSNSSLTRHLQSAFASGVRNLILDGEMITWDMSVDKMVPFGTLKTAALAEQQNR
SGSDASGHRPLFRVFDILYLNDKQLTQYTLRDRHHALEKAVQPVHRRLEIHSYTSATSPD
AIEPLLRDVVASASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMSEFGESLDCLVIGGYYG
SGKRGGTLSSYLCGLRASPNQVQAGADPEKCFSFFKVGGGFRAEDYAEIRHRTEGKWIDW
DARHPPSQFIELGGGEAKQLERPDVWIRPKDSIVVSVKAASVGPSDSFARGYTLRFPRFR
RLRLDRAWDSALSVDEFQSLKQHADEESKDKAMTMEDKKRGRNPKRVKRELVIVGGESTK
GPLPLQTTRTTGLFDGIEFCVLSESLKPFKRTKAELEVIIKENGGTVSQRAAPATAMVLI
ADKKVVKVASLMKQGAVDIIRPRWIQDCLTQLQADTEAGAGLFLLPYEEVHLFHATDALK
HVAAQNTDQYGDSYARDLPLEELRALMRDMPKIESGEGPFDKRGFLDELADRGRDLSAQL
RSMMFQRCVVHVHRASAGDAGEEAEAERLARYVRYGGGVCVDGLESEGLTHVVLARDSQD
TAEELRRELSTRPKLPRLVRGSWIETCWKERSLVDEEQYSV
NT seq 3006 nt   +upstreamnt  +downstreamnt
atgagcgaagcggaagccagagcgatcgatgatgatgccgagcatgaggagcagatccag
tacggctctgaggaagcccgaaaggagcttgacgaaaaatatcccaacaggccgcataac
tttgccaaaacactgctcttttcagacttgtaccggaacctctttaacccgctcaatgag
aacaagcggcagcccactggcggcgtcgcgcgcaaaaagggcccccgcgggcagacgcag
ctctcgccgcaggagcagcgccgccacatcatcgaccgcttcatcacgcgctggcgcaag
gaggtcggcccagacttttaccctgcgctgcgccttatcctgcccgacaaggaccgcgac
cggggcgtctacggcttgaaggagaatgccataggaaagcttctcgtcaagctgatgaag
attgacaaaaactccgaggacggctacaacctgctgcactggaagctgccgggccagacc
acggcggcgcggctcgcgggcgactttgccgggcgctgctacgaggccatctcgaagcgc
ccgatgcgcaccgagcccggcaccatgaccattgccgaggtgaatgagcagctggacaag
ctggccgcgtcggccggcgagagcgagaatgtgcgcgtctttgaaacgttttacaaccgc
atgaatgcagaggagttgctgtggcttatccgcatcgtcctgcgacagatgaaggtcggc
gcgacggaaaagacgctgctgtacctgtggcaccctgacggggagtcactgtttagcgtg
tcgtcgagcctgcgccgcgtgtgctgggagctatacgacccggcggtgcggctcgagtcg
gagggcgcgagcctcacgctgatgcagtgcttccagccgcagctggcgcagtttcagacg
ccagcgtcgttcaagaagatgactgagctgctgcggccgacccctgacgaccctgagttc
tggatcgaggagaaactcgacggcgagcgcatgcagatgcacatgatggaggaccccagt
accccaggcggcaagcgattctgcttctggtcacgcaaggccaaggagtacacctacctc
tatggtcacggcttccacgacagcaattccagcctgacgcgccacctccagagcgccttt
gcatcaggcgtgcgcaacctcatccttgacggcgaaatgattacatgggacatgagcgtt
gacaagatggtcccgtttggcacgctcaagacggccgcgctggctgagcagcagaaccgc
tcaggctccgacgcctcgggccaccgcccgctgttccgtgtctttgatatcctgtacctc
aacgacaagcagctgacgcagtatacgctgcgcgaccgccaccacgcgctagaaaaggcc
gtccagcccgtgcaccgccgactggagattcacagctacacgagcgccacatcacccgac
gccatcgagccgctgctgcgcgacgtcgtggccagcgcctccgagggcctggtgctcaag
aatccgcggtccatgtaccgcctcaacagccgcaacgacgactggctcaaggtcaagccc
gaatacatgtccgagtttggcgagtcgctcgactgcctcgtcattggcggctactacggc
tccggcaagcgcggtggcacgctgtccagctacctctgcggtctgcgcgcctcgcccaac
caggttcaggctggtgccgacccagaaaagtgcttcagcttcttcaaggtcggtggcggc
ttccgcgctgaagactacgccgagattcggcaccgcaccgagggcaagtggatcgactgg
gacgcgcgccacccgccctctcagttcattgagctcggcggcggcgaggccaagcagctg
gagcggcccgacgtgtggatccgccccaaggactccatcgtcgtgtcggtcaaggcggcg
agcgttgggccttcggactcgtttgcgcgcggctacacgctgcgttttccgcgcttccga
cggctgcggctggatcgcgcgtgggatagcgccctctccgtggacgagtttcagagctta
aagcagcacgccgatgaagagtccaaagacaaggccatgacgatggaggacaagaagcgc
gggcgcaacccgaagcgtgtgaagcgcgagctcgtcatcgtcggcggcgagagcaccaag
ggcccgctgccgctgcagacaacccggacaacggggctgtttgacggcatcgagttttgt
gtcctatccgagtcgctcaagccgtttaagcgcaccaaggcggagctggaagtcatcatc
aaggagaacggcggcaccgtctcgcagcgcgcggcaccggcgacggccatggtcctcatc
gcggacaagaaggtcgtcaaggtcgcgagcctgatgaagcagggcgccgtggacataatc
cggccccggtggatccaggattgcttgacgcagctgcaggccgacacggaggcgggtgcg
ggcctcttcttgctgccgtacgaggaggtgcacctgttccacgcgacggacgcgctcaag
cacgtggcggcgcaaaacacagaccagtacggcgacagctacgcgcgggacctgcctctc
gaggagctgcgggcgctgatgcgcgacatgcccaagattgagagcggggaggggccgttc
gacaagcgcgggtttctggacgagctggcggacagagggcgagatctgtcggcgcagctg
cggagcatgatgtttcaacggtgcgtggtgcatgttcatcgtgcttcggctggtgatgcg
ggtgaggaggcggaagcggagaggttggcgcgctatgtacgctatggaggcggtgtctgt
gtggatggcctggaaagtgagggcctcacgcatgtggtgcttgctcgagatagtcaggat
actgcagaggagctgcgtcgggagctgagcacgaggccaaagctgccccgtctggtacgt
ggcagctggatcgagacttgctggaaggagaggtcgctcgtcgatgaagaacagtacagt
gtatga

DBGET integrated database retrieval system