Cordyceps militaris: CCM_02684
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Entry
CCM_02684 CDS
T03108
Name
(RefSeq) tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cmt
Cordyceps militaris
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmt03016
]
CCM_02684
Enzymes [BR:
cmt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CCM_02684
Transfer RNA biogenesis [BR:
cmt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CCM_02684
Prokaryotic type
CCM_02684
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
18164711
NCBI-ProteinID:
XP_006667899
UniProt:
G3JB53
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MATNGESSDANPSAGGGSSSGQDRKQRFGGSRVTSNNQRKTGRGGKSSDGKRGEKREGNS
DWREYKRRKVDSAGEVIEAKNPFSKDEIAAEERRPKRKVAVMIGYSGTGYKGMQVNGDEP
TIERDLFRAFIKAGAISKANADDPRKSSLARCARTDKGVHAAGNVISLKLIIEEDDIVDK
INEALPEQIRIWGIQRTNNSFNCYQYCDSRFYEYLLPSYCLLPPHPQTFLGQKLVELNKE
YGYEEQYNTHMADVEGFWADVEENAIKPILAKLDPEVRAAVLERIHSMDDPEAAKDEATK
EETKTKTDEPAAPEAPVADTEPKPATENPVVLPSTKPKGRELGPVDFALRDIKAAYINAK
RNYRITPARRERLQAALNKYTGTRNFHNYTVQKAYGDPSAKRTIKSFRVNPTPVLINNTE
WLSLKVHGQSFMMHQIRKMVGLVSLMVRCGTPLERMDESYCNNKMAIPKAPGLGLLLEHP
VFTNYNRRATDNLGRPEIDFDKYEEKMGAFKDKEIYQRIFDVEEKENSFHAFFNQIDQFK
ANHFLWLTAGGLKVAEIANRDGGKGETVDKQLGDEDEEDPDGGQG
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaaacggcgagtcttctgatgcgaacccgtccgcaggtggcgggagcagttct
ggtcaggaccgtaagcagcgcttcggaggctctcgagtcaccagcaacaaccagcgcaag
acgggccgtggcggcaagtcgtcggatggcaagcgcggcgagaagcgcgagggtaacagc
gactggcgcgaatacaagagacgcaaggtagattccgcgggcgaggtcatcgaggccaag
aaccccttctccaaagacgagattgcggccgaggagcgacgcccgaagcgcaaggtggcc
gtcatgattggctacagcggcacggggtacaagggcatgcaggtcaacggcgacgagccc
accattgagagggacctgttccgcgcctttatcaaggctggcgctatttcaaaagccaac
gctgatgacccccgaaagtcgagcctcgcccggtgcgcccgcacggataaaggtgtccac
gctgccggcaacgtcatcagcctcaaacttatcatcgaagaggacgatattgtggacaag
atcaacgaggcgctgccggagcagattcgcatttggggcatccagcgcaccaacaacagc
ttcaactgctaccagtactgcgactcgcgcttctacgagtacctgctgcccagctactgt
ctgctgcccccccatccacagacgttccttggccagaagctggtggagctgaacaaggag
tacggttacgaggagcagtacaacacccacatggccgatgtcgaagggttttgggccgac
gtcgaggagaatgcgatcaagccgatcctcgcgaagctggaccccgaggtacgcgccgcc
gtattggagcgcatccactcgatggatgaccccgaagccgcaaaggacgaggcaaccaag
gaagagaccaagaccaagaccgacgagcccgcagctccagaagctcctgtcgcggatacc
gaaccgaagccagccaccgaaaaccccgtcgtcctgcccagcaccaagcccaaggggcgt
gaactaggccccgtcgactttgccctgcgcgacatcaaagccgcctacatcaacgccaag
cgcaactaccgcatcacgccggcgcgccgcgagcgcctgcaggcggcgctcaacaagtac
acgggcacgcgcaactttcacaactacacggtgcaaaaggcctacggcgacccgtcggcc
aagcgcaccatcaagtcgttccgcgtgaacccgacgccggtcctcatcaacaacaccgag
tggctttcgctcaaggtgcacgggcagagcttcatgatgcaccagatccgcaaaatggtt
ggcctggtcagcctgatggtgcgctgcggcacgccgctggagcgcatggacgagagctac
tgcaacaacaagatggcgattcccaaggcgcccggcctcggcctgctgctggagcacccc
gtgtttacaaactacaaccgccgcgcgacggacaacctgggccgccccgagattgacttt
gacaagtacgaggagaagatgggcgcgttcaaggacaaggagatttaccagcgcatcttt
gacgtggaggaaaaggagaattccttccacgccttttttaaccaaatcgaccagttcaag
gcgaaccacttcctgtggctgactgcgggcggtctcaaggtggccgagattgccaacagg
gacggcggcaagggggagactgtggacaagcagctgggcgatgaggatgaggaggatcct
gatggcggccagggctag
DBGET
integrated database retrieval system
