Chelonia mydas (green sea turtle): 102933369
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Entry
102933369 CDS
T02989
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmy03021
]
102933369 (TAF1C)
Transcription machinery [BR:
cmy03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
102933369 (TAF1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
102933369
NCBI-ProteinID:
XP_037758691
LinkDB
All DBs
Position
5:complement(1100504..1111374)
Genome browser
AA seq
965 aa
AA seq
DB search
MAFPGSLFPAGCRAGPPRDLPRPAPLAGWGGYGQVQGAGPSQPQERFIPLRSKKGERWAP
AEACAVPFLSPNTSCRVPTLTPHDILYVGQIQRKHQASKTGGAALDFTGQLAHFFLDHPE
EAFGAMGQLLQEHFSLGEAQLQSKAQENTISVKTLVQELGRREDRRDCPWLQPSPRLRWF
SCLSRDWLFEVPLGLLAECVHEELALQWAKLLFDDAPTGGALAWLPTEDVAPAPGGCLVY
PGGEAMNLLCFQEVSLEQVAGALQPRAQGCHAQFELSGRVRQVATAQVAGEALVGVRSDH
HCGAWRLRAGTAPAPLQVIRTDAPASCLTVSPHLPGELSVCTLSGAVYLWNVETGLQRLR
QDPETAFFREASPWRWSEFTAHPRVLSCADRTGLQCLDVRAPASRQFDLFKVGGEAECQS
GERVMLPMYLGRAHPCQHLVATQFSVYVVDERFPLVPMLRWEHMLEAPPVFAHLSPGQSQ
ERSHKVLLGTQRTQELLLLQYTGGSHSACQLAGPPRRLHPIYQGLQHLPAQVTPQQGLLC
QRLTVPAAGVTAAHAGQGPLESLLVFQLSEAGDLFYQTLLHEPPAESESSAAPASPPSLP
APAAAGQPSPTWGASMGSGGEESGRLPPLPGTVSEGTADAGQAAAPEEARPSVGPSPAAA
ARYSCWLKALIRDWRRLPEQSQPQALPTISQRRLFTHGELSQPTGDGAPYCRARQLLRQA
MRERGCLAPWALGPPPAPLAMPHPVEPGAWPDDLSKRLTAAWAGGWGEWWEEKLGVTRAH
KLHVLRDRRRRWKQARSRRSLSGSFTSSVTYQSDLSDFSAGSQPPGQAHEEQRPPAPMCH
QDLSPPRAGRGALPPAPGQFWPASPLDSSSQRSGQGAQEAWGSQDVEDSSQLLSSQTLSS
RGIPKERRKTLRDYLALFTEPAPEPLSELPASQASSLGSQHWGPSSQSQRSTVSQPRRKR
PRMGF
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcccgggctcgctcttccccgccggctgccgcgccgggcccccgcgggacctg
ccccgcccggcgccgctcgcgggctggggcggctacgggcaggtgcagggggccggcccg
agccagccccaggagaggtttattccgcttcgcagcaagaagggcgagagatgggcccct
gccgaggcgtgtgccgtgccgttcctgtcccccaacacgagctgccgtgtccccacgctg
acaccccacgacatcctctacgtggggcagattcaaaggaagcaccaggccagcaagact
gggggggctgccctggacttcacagggcagctggctcacttcttcctggatcaccctgag
gaggccttcggcgccatggggcaacttcttcaggagcacttctccctgggggaggcgcag
ctgcagagcaaggcgcaggaaaacaccatctcagtgaagaccctggtgcaggagcttggc
cggagggaggacaggcgtgactgcccctggctccagcccagcccacggctgcgctggttc
tcctgcctgtcccgggactggctgttcgaggtgcccctgggcctgctggccgagtgcgtc
cacgaggagctggccctgcagtgggcgaagctcctgttcgacgacgccccgactgggggg
gcactggcttggctccccactgaggacgtggctcctgcccccggcggctgcctggtctac
ccaggaggggaggccatgaacctcctctgtttccaggaggtgtctctggagcaggtggct
ggtgccctgcagccccgcgcccaaggctgccacgcgcagtttgagctcagtggccgggtc
cgccaggtggccaccgcgcaggtggccggggaagcccttgttggcgttcgctcggatcat
cactgtggtgcctggcggctccgggctggcaccgcccctgccccgctccaggtcattcgc
actgacgcgcccgcctcctgcctcaccgtcagcccccacctccccggggagctgtccgtc
tgcaccctcagcggggccgtgtacctctggaacgtcgagactgggctgcagcgactgcgc
caggaccccgagacggcgttcttccgagaggcatccccatggcgctggagcgagttcacc
gcccacccgcgggtgctgagctgcgctgaccgcactggcctgcagtgcctcgacgtgcgg
gctcccgccagtcgccagtttgatctgttcaaggtgggaggagaagctgagtgccagagt
ggagagcgagtgatgctgcccatgtacctgggcagggcccacccctgccagcacctcgtc
gccacgcagttctcggtgtatgtggtggacgagcgcttccccctggtgccgatgctgcgt
tgggagcacatgctggaggccccgcccgtcttcgcccatctcagcccgggccagtcccag
gagaggagccacaaggtgctgctgggcacccaacgcacgcaggagctgctgctgctgcag
tacacgggtggcagccattcggcctgccagctcgcagggcccccccggcggctccatccc
atctaccagggtctgcagcacctccccgcgcaggtgaccccccagcagggcctgctgtgc
cagaggctgaccgtacccgcagctggtgtgacggccgcccacgccggacaggggccgctg
gagtccttgctggttttccagctctccgaggccggggacctgttctaccaaaccctgctg
cacgagccgccggcggagagcgagtcgtcggcagcccccgcctcgcccccatccctgcca
gctcctgctgcggccggccagccctcgcccacgtggggcgcctccatgggctcgggcggt
gaggagagcggccgcctgcctcccctgccagggaccgtctccgagggcaccgccgatgcc
gggcaggcagcagccccggaggaagccaggcccagcgtgggccccagcccggcagccgct
gcccgctacagctgctggctgaaggctctcatcagggactggaggcggctgccggagcag
agccagccccaggccctccccaccatcagccagcggcgcctcttcacccatggggagctg
agccagccgaccggggacggcgccccctactgccgagcccgccagctgctgcgccaggcc
atgcgggagcgtggctgcctggcgccctgggccctggggccgccccccgccccgctggcc
atgccgcaccccgtggagcccggggcctggcccgacgacctgagcaagcggctgacggcg
gcgtgggcgggcggctggggcgagtggtgggaggagaagctgggcgtgaccagggcccac
aagctgcacgtgctgcgggaccggagacggcgctggaagcaagcgcggagccgccgcagc
ctgtcgggcagcttcacctcctccgtcacctaccagtccgacctcagtgacttctccgcc
ggcagccagccccccggccaggcccacgaggagcagcggcccccggcccccatgtgccac
caggacctttccccaccgcgggcgggacggggggccctgcccccagccccggggcagttc
tggccggcctcccccctggacagcagctcccagcgcagtgggcagggtgcccaggaggcc
tggggcagccaggatgtggaggactcctcccagctgctctcgtcccagaccctgagctcg
cggggcatccccaaggagcgcaggaaaaccctgcgggactacctggccctcttcaccgag
cccgccccggagccgctgtccgagctgcctgcgagccaggcctccagcctgggcagccag
cactggggcccctcctcccagagccagcgctccaccgtgtcgcagccccgccgcaaacgg
ccccgcatgggcttctga
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