Chelonia mydas (green sea turtle): 102935796
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Entry
102935796 CDS
T02989
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102935796 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmy03041
]
102935796 (PRPF38B)
Spliceosome [BR:
cmy03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
102935796 (PRPF38B)
Complex C
U4/U6.U5 tri-SnRNP related factors
102935796 (PRPF38B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
102935796
NCBI-ProteinID:
XP_037762341
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All DBs
Position
8:complement(65265213..65277303)
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AA seq
546 aa
AA seq
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MANNSPALGAGNCQQQQQAAQHQAGSVPPAQPPLQSGAPKPAASGKQGNVLPLWGNEKTM
NLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGV
RGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWD
WFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTR
PRKIKKDAKEGVEEIDRHAERRRSRSPRRSVSPRRSPRRSRSRSHHREGHGSSSFDRELE
RERERQRLEREAKEKEKERRRSRSTDRALERRRSRSRERHRSRSRSRDRKGDRRDRDRER
EKENERSRKKDRDYDKEKGNERERSRERSKDRKSKGEIEEKRHKDDKDEKKHRDDKRDSK
KDRKHSRSRSRERKHRSRSISKNTGKHSRSRSKEKLSKHKNEGKDKSNKRSRSGSRGRTD
SVEKSRKRDHSPSKERSRKRSRSKERSHKHDHSDSKDHSDKHDHRRSQSTERESQEKQHK
NKDETV
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaatagccccgcgttaggcgccggcaactgccagcagcagcagcaggcggcc
cagcaccaggccggatccgtcccgccggcccagccgccgctacagagcggggcccccaaa
ccggcggcctcgggcaagcagggcaacgtgctgccgctgtgggggaacgagaagaccatg
aacctgaatcccatgatcctcaccaacatcctctcctcgccctacttcaaggtgcagctc
tacgagctcaagacctaccacgaggtggtggacgagatctacttcaaggttacacatgtt
gaaccatgggagaaagggagcagaaaaacagcaggccagacagggatgtgcggaggggtg
cgaggtgttggaactggtggaattgtgtctacagctttttgcctgctttacaaattattt
actctgaaactcactcgtaagcaagtgatgggcctcataacacacacagattctccgtac
attagggctcttggatttatgtatattaggtacacacagcctcctactgatctatgggac
tggtttgaatcgttccttgatgatgaagaggacctggatgtgaaggcaggtgggggttgt
gttatgaccattggggagatgcttcgttcctttcttactaagctcgaatggttttcaaca
ttgtttccaagaattcctgtgccagtccagaaaaacattgatcagcaaataaaaaccaga
cctagaaaaatcaagaaggatgccaaggagggagtggaagaaatagatcgacatgcagag
cgtagacgttcaaggtctccaagaaggtctgtgagccccaggaggtctcctagaagatcc
agaagcagaagtcatcatcgggaaggtcatggatcatctagttttgatagagaactagaa
agggagagagaacggcagagattagaacgtgaagctaaggagaaagaaaaagaaaggcga
agatcacgaagtactgatcgtgcattagagcggaggcgaagcagaagcagagagagacac
agaagccgtagtcgaagtcgtgatagaaagggagatagaagagacagggatagagagcgg
gagaaagaaaatgaacgaagcaggaaaaaagatagagactatgacaaggaaaagggtaat
gaaagagagagatctagggaacggtcaaaagacaggaaaagtaagggtgaaatagaagag
aaaagacacaaagatgacaaggatgaaaagaagcacagggatgataagagagattccaaa
aaagacagaaaacatagtagaagtcgaagcagggagaggaagcataggagtaggagtata
agtaagaatacaggtaaacacagtagaagcaggagcaaggagaaattaagtaaacataaa
aatgaaggtaaagataaatcaaataaacgaagtagaagtggaagcagaggaagaaccgat
agtgttgaaaagtccagaaaacgagaccacagtcccagcaaagagagatcccgaaagcgt
agtagaagcaaagaacgatcccataaacatgatcacagtgatagcaaggaccattcagac
aaacatgatcatcgaaggagccaaagtacagaacgagagagccaagaaaagcaacataaa
aacaaagatgaaactgtgtga
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