Chelonia mydas (green sea turtle): 102941644
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Entry
102941644 CDS
T02989
Symbol
NPHP1
Name
(RefSeq) nephrocystin-1 isoform X3
KO
K19657
nephrocystin-1
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cmy03037
]
102941644 (NPHP1)
Cilium and associated proteins [BR:
cmy03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
102941644 (NPHP1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_1
SH3_9
SH3_2
SH3_10
NOA36
Motif
Other DBs
NCBI-GeneID:
102941644
NCBI-ProteinID:
XP_037752172
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All DBs
Position
3:complement(199924372..199961514)
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AA seq
730 aa
AA seq
DB search
MLGRVVRLWLHSGLPRPPMFRTRGDDDVQSVRLLSDAMSGRRGRSPLQGVQRRGRELRQQ
VEALVSDSKERGALDPAKRKYLFQRCMELKKSVDENTSVLQNLKKADEPAPVGNYNQRKE
EEEKQLLTLSQQLQKLAAVLSQDSVTKGYNVDGKCQNSPQTEQENEEEEEEDEESSGEED
AEEEDDDDDDNDEEEDDDDELEDQPTIKECITVGDFVAQQDGDLTFKKGEVLLILDKKPD
GWWMAKNSKGERGLVPKTYLMACNKGVGQEPSEEESEEDIEVVDETADRTEIKKRTDSHW
SAVRKAITENNTIDVLATMGAVPAGFRPSTLSQLLEKGNQFQASYFIQPELTPSQLAFKD
IVWNPEKDTIQPRPTRVSLILTLWSCKMIPLPGVSIQVLSRHVRLCLFDGNRVLSNIHTV
RATWQPKNPKTWTFSPRVTGILPSLLDGDCFIRSNSSSPDIGILFELGITYIRNSTGERG
ELSCGWTFLKLFDSSGIPVSSKTYELLLNGGTPYERGIEVDPSISRRASSGVFHQMITLK
KQPQLLVKLRSLSTRSKGILNLLPETLIGSMCYIHLLIFYRQILSDVLLKDRISMQSADL
ISNPILATFPKLMEQPDLMDALRSAWAEKESTLKRSEKRDQEFLKSVFFLVYHDCVFPLL
QSTFLPEHKWADEESEASRWKVIADFLKRNQEKDSALYSLLSSENVHKAFDISEITYDFL
GQARKSSASV
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgctgggacgcgtagttcgcctctggctccacagcgggctcccccgccctccgatgttc
cggacgcgcggcgatgacgacgtccaaagcgttcgtctccttagcgacgcgatgtccggg
cggaggggccgcagcccgctgcagggggttcagcggcggggccgcgagctacggcagcag
gtggaggcactggtttctgacagcaaggagaggggggccctagaccctgcgaaaaggaag
tacctttttcagagatgtatggagttgaagaaatcagtggatgaaaatacatctgttctt
caaaacttgaaaaaagctgatgagcctgcacctgtggggaattataatcagagaaaagaa
gaggaagaaaaacaattgttaacactctctcagcagctacagaaacttgctgcagtcctg
agtcaggacagtgtgaccaagggttacaatgtagatgggaaatgtcaaaatagtcctcaa
acagaacaggaaaatgaggaagaggaggaggaggatgaagaaagtagtggggaggaagat
gctgaagaggaggatgatgatgatgatgataatgatgaagaagaggatgatgatgatgaa
ttggaagatcaaccaacaattaaagaatgtatcacagttggtgattttgttgctcagcag
gacggggatctcacgtttaagaaaggtgaagtgttgctcatacttgacaaaaagcctgat
ggttggtggatggctaaaaattccaaaggggagagaggccttgttcctaaaacctatctc
atggcatgcaataaaggagttggccaagagccaagtgaagaggaaagtgaggaagacata
gaggtggttgatgaaacagcagatagaaccgaaattaaaaaaagaacagattctcactgg
agtgctgttagaaaagctatcacagagaataataccattgatgtgttagcaaccatggga
gctgttcctgcaggattccgaccatcaactctctcccagctcttagaaaaagggaatcag
tttcaagccagttacttcatacagcctgaattgactccttcacaactggctttcaaagac
atagtgtggaaccctgaaaaagacactattcagccaagaccaactcgagtgtcactgatt
ttaactttatggagttgtaaaatgattcctcttccaggagtgagcatacaggttctcagt
agacatgttcgactctgtctttttgatggtaacagggtactgagtaacattcatacagtt
agagctacatggcaacctaaaaatcccaaaacatggaccttctctccacgggtaacaggc
atcttacccagcttgcttgatggtgactgttttatcaggtccaattcttcatctccagac
attggtatattatttgaacttggcatcacttatattcgcaattcaactggtgaaagagga
gagttaagctgtggttggacatttctaaaactcttcgactccagtggaattccagtttct
tccaagacatatgagcttcttttgaatggtggcacaccctatgagagaggtattgaggtg
gacccatcaatatcaagaagagcaagcagtggtgttttccatcagatgataacactaaag
aaacagcctcaacttctagtgaaactgagatcattaagcacacgatcaaaaggcatcctg
aatctgctaccagaaacgttaattggcagtatgtgctacattcatctcttgatattttat
cgacaaattctcagtgatgtgctcctgaaggacagaataagcatgcaaagtgctgattta
atcagtaatcctattttagcaactttcccgaaactcatggagcagcctgaccttatggat
gcacttaggagtgcttgggcagaaaaggaaagcacattaaagcgatcagaaaagagagac
caagaatttctgaagtctgtgtttttcctggtgtaccatgactgtgtcttccctcttctc
cagtccactttcctcccagagcacaagtgggcagatgaagagtctgaagcctcgcgctgg
aaagtgattgctgacttcctgaagcggaaccaagaaaaagacagtgcactctactctctg
ctctcctcagaaaatgttcacaaagcttttgatatttcagagatcacatacgacttctta
gggcaagcaaggaagagcagtgcctcagtttga
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