Chelonia mydas (green sea turtle): 102943424
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Entry
102943424 CDS
T02989
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102943424 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmy03041
]
102943424 (PRPF38A)
Spliceosome [BR:
cmy03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
102943424 (PRPF38A)
Complex C
U4/U6.U5 tri-SnRNP related factors
102943424 (PRPF38A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
102943424
NCBI-ProteinID:
XP_037762619
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All DBs
Position
8:complement(95425720..95430661)
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AA seq
312 aa
AA seq
DB search
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRYVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLETR
VSALEEDMDDVESSEEEEEEDEKLERAPSPDHRRRGYRDLDKPRRSPALRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccggacggtgaaggacgcgcacagcatccacggcaccaacccgcagtacctg
gtggagaagatcatccgcacccgcatctatgagtccaagtactggaaggaggagtgtttc
ggcctcacggctgagctggtggtggataaagccatggaactgagatatgttggtggcgtt
tatggtggaaacatcaagcctacaccattcctctgcttgaccctgaaaatgctgcagatc
cagcctgaaaaggacatcattgttgagtttataaagaacgaggatttcaaatatgtcaga
atgcttggtgcattgtatatgagattgacgggcactgccattgactgctacaagtacctt
gaaccactgtacaatgactaccgaaaaataaaaagtcaaaacagaaatggggaatttgag
ctgatgcatgtggatgagtttattgatgaactccttcacagtgaacgtgtgtgtgatatc
attttgcctcgactgcagaaacgttatgttctggaagaagcggaacaactggagactcgg
gttagtgctttagaagaagatatggatgatgtagagtccagtgaggaggaggaggaggaa
gatgagaagctggagagggcaccttcccctgatcatcgcagaagaggctacagagaccta
gataaaccccgcagatctccagctctgcgatacaggaggagtcgaagcaggtctccaaga
aggcgaagcagatctccaaagaggagaagcccctccccacgtcgggagagacatcgcagc
aaaagcccaaggcgacaccggagcaggtccagggagaggcgccacagatcaagatctaaa
tctccagggcatcatcgtagccaccgacacagaagccattctaagtcacctgaaagatct
aagaaaagccataagaagagtcggcgagggaatgaataa
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