Cryptococcus neoformans var. neoformans B-3501A: CNBC6490
Help
Entry
CNBC6490 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
cnb
Cryptococcus neoformans var. neoformans B-3501A
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cnb01009
]
CNBC6490
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnb03019
]
CNBC6490
04131 Membrane trafficking [BR:
cnb04131
]
CNBC6490
03036 Chromosome and associated proteins [BR:
cnb03036
]
CNBC6490
Enzymes [BR:
cnb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
CNBC6490
Protein phosphatases and associated proteins [BR:
cnb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
CNBC6490
Messenger RNA biogenesis [BR:
cnb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
CNBC6490
Membrane trafficking [BR:
cnb04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
CNBC6490
Chromosome and associated proteins [BR:
cnb03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
CNBC6490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Arb2
DUF1749
Ser_hydrolase
Motif
Other DBs
NCBI-GeneID:
4935317
NCBI-ProteinID:
XP_776260
LinkDB
All DBs
Position
3:1861204..1864293
Genome browser
AA seq
737 aa
AA seq
DB search
MHSPSPLCAPPSLRPAPAHRRMAHTAAMHTGPPPAAPTNVGNSPSHTTMAMPGAAARIAR
TGYIYDPLMMLHCMEGYMPTAENVMDNGDGHPEDPMRIKRIFTRLAEQGLIRRMKRLDFE
EVKFEQVLLVHGEEMWDKVQATELLSDQQIQDMKEYYDQLSLYVCRETAHCARLSAGGVI
QACRSVCKNEVRNAFAIVRPPGHHAEPNEHMGFCFFNNVAVATREMQREGLAKKVLILDW
DVHHGNGTQRAFWHDGDVLYMSLHRHEGGTFYPNSDFGSLNMVGDGEGVGKSVNIPWPGP
GFGDADYIYAFQRIIMPIAYEFDPDLVIISAGFDAADGDMLGQCRVTPAAYGHMTHMLSS
LAGGKLVVALEGGYNLRAISDSALAVARVLLGEIPPELGIMRASEAATEVVYQVALEQSK
YWKCIDVKACEPPEVTELENGTSPVYTIPDLLKIHRAHHMFTKHQLYQIPLASQELEAAF
GGQIICNENMYEVGEKGVLVVFVHDFGNLRVETDGARSTNIHLANSYLLDTSDAVVSWVK
TKGYNIIDVNILKQLPTEYPEGPKMVVKQANDMESKLMKYIWDNYIELSECEKVVFIGHG
TGCQAIMDLVNARDVELKVKAVVQVAGLHSLVRPNPSNKEKLSWFKQCNQIYVPAEHVVL
EDEKVKRRLGDAVFTSQKAKVVDVLNDVLPRIKAFVESKVEDGLAPRAHSGLDGLYGLGG
AGAGGELVVVNGHVHVG
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgcactccccctcccccctttgtgctcccccttctctccgccccgcgccagcgcaccgc
aggatggcacacacagccgccatgcacactggcccgccccccgccgcccccacaaacgtc
ggcaactcgcccagccatacaaccatggccatgccaggcgcagcagcacgtatcgcccgt
accggctacatctacgaccctctcatgatgctgcactgcatggaaggctacatgcccacc
gcagaaaatgtaatggataacggcgacggacacccggaagatcccatgcggatcaagagg
atctttaccaggctggcggagcaagggttgatcaggcggatgaagaggctggattttgaa
gaggtcaagtttgagcaagtcttgctggtgcatggcgaggagatgtgggataaagtgcag
gctacggagctgttgagcgatcagcaaattcaagatatgaaagagtactacgatcagcta
tccctctacgtctgccgtgagactgcccactgtgctcgtctttctgcgggaggtgtgatt
caagcatgtcgatcagtctgcaagaatgaagtgcgcaacgcctttgccatcgtacgtccg
ccgggccatcacgcagagcccaacgaacatatgggtttctgtttcttcaacaacgttgca
gtggctaccagggagatgcagagggaagggttggccaaaaaggtcttgatcttggattgg
gacgtccaccatggtaacggtacacaaagagcattctggcatgatggtgatgtactttac
atgtcattacatagacatgaaggaggaacattctaccccaacagcgatttcggatctctc
aacatggtcggtgatggtgaaggtgtcggcaagtctgtcaacatcccctggcctggaccg
ggtttcggtgatgccgactatatctatgctttccagcggatcatcatgccaatagcatac
gagttcgaccccgatctcgtcatcatttctgccggattcgatgctgcggacggagacatg
ctcggtcaatgtcgtgtcacccctgcagcttacggacatatgacacatatgctcagctca
ttggctggtggcaagcttgtcgtcgctcttgaaggtggatacaatctccgagccatctcc
gattccgccctcgccgtcgcccgtgtcctcttgggtgaaatcccgcccgagctgggcatc
atgcgagcatccgaagcggctaccgaggtggtctaccaggtcgcgcttgaacagagcaag
tactggaagtgcatcgatgtaaaggcttgtgaaccgcctgaagttaccgagcttgagaat
ggcacttctcccgtgtatacaatcccagacctactgaaaatccatcgcgcacaccacatg
tttaccaaacaccagttgtatcaaataccattggccagccaagaattagaagctgcattt
ggcggtcagatcatctgcaatgagaatatgtatgaagttggagaaaagggagtgctggtg
gtgtttgtccatgattttggtaacctgagagtggagaccgacggcgcaaggtcgaccaac
atccacctggcgaacagctaccttctcgatacgagcgatgcggttgtctcatgggttaaa
acaaaaggctacaacatcatcgatgtcaatatcctaaagcaactacctaccgaatacccc
gaaggccccaagatggtcgtgaaacaagccaacgacatggaatccaaattaatgaagtac
atttgggataattacattgaactgtccgaatgcgaaaaggtcgtgttcatagggcacggt
acaggctgtcaggcgatcatggatcttgtcaatgcgagggatgtcgagctcaaggtgaag
gctgtggtgcaagtggccggcttacattccttggtcagaccaaatccgtcaaataaggaa
aagttgagctggttcaagcagtgtaatcaaatctacgtgcctgccgagcatgtggtattg
gaagatgaaaaggttaagcggagattaggcgacgcggtgtttacatcccaaaaagcaaaa
gtcgtcgacgttctcaacgatgtccttccgcgaatcaaggcctttgtcgaatccaaagtc
gaagatgggcttgcaccccgcgcgcattcgggtctggatggcttatacggtctaggaggt
gctggtgctggtggagagctggtagttgttaatggacatgtacatgtgggatga
DBGET
integrated database retrieval system
