KEGG   Cryptococcus neoformans var. neoformans JEC21: CNA07480
Entry
CNA07480          CDS       T00243                                 
Name
(RefSeq) DNA mismatch repair protein MSH2, putative
  KO
K08735  DNA mismatch repair protein MSH2
Organism
cne  Cryptococcus neoformans var. neoformans JEC21
Pathway
cne03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cne00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    CNA07480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cne03400]
    CNA07480
DNA repair and recombination proteins [BR:cne03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     CNA07480
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_II MutS_I
Other DBs
NCBI-GeneID: 3253654
NCBI-ProteinID: XP_567098
UniProt: Q5KN74
LinkDB
Position
1:complement(join(2047683..2047930,2047992..2048031,2048089..2048338,2048389..2048480,2048538..2048866,2048913..2048974,2049029..2049092,2049140..2049311,2049370..2049630,2049685..2049777,2049831..2050000,2050055..2050351,2050403..2050477,2050523..2050646,2050697..2051176,2051235..2051270,2051349..2051398,2051456..2051507,2051578..2051580))
AA seq 965 aa
MPMYGNESTSAPKPLFDMDKDSEEKFVRFVERMPTKLDGMIRLFDRGDYYSAHGADAIFI
ANEVYRTTNVLKYLGSGSKPSSSSGQYARGLPSVTISMALTKAFLREALTTKQMRVEIYA
PTGGVAPGSRKDHSKWEISKTASPGNLSQVEDLLFSDRDLTANAVSMAIRVVVKDGINTV
GVGFVDVQEKVVGVSEFVDDENFSNTESLLIQLGVKECILQADEKRPELAKLRMLVEWCG
VIVTDRKSSEFQTKNVEQDLNRLLHESHAGAALPEFDLKIAMSALSALINYLSLLSDLSL
HGQLRLYRHDLSQYMKLDASALKALNLMPNPQELGGNKNMSIYGLLNRCKTSQGTRLLGR
WLKQPLVNRHEIIQRQTMVEVFVEDSVNRQSIQTKYLKQMPDFHRISKKFHKRVAGLEDV
VRVYQAVQLLPGLQEILENADTPEPGARDLIEEIWLKPLREHIEKLGNYSSMVEDTIDLD
ELANHNYVILPTIDEDLQRYREELLNVRDQLDDEHRRVGSDLGLDIDKKLHLENHQVYKY
SFRITKAEASLIRNKKEYIDLATQKSGTIFTTKTLKALSEEYFRLQELYEKQQRHLVKEV
VSIASSYTPVLEMLDNLIAAVDVIVSMAHVSSEAPIPYVKPILTEKGTGDVVVLGARHPC
LEVQDDIVFIPNDHEMRKGDSEFIILTGPNMGGKSTYIRQIGVIALMAQVGCFVPATEAR
LPIFDCILARVGAGDNQLKGVSTFMAEMLETATILRSATKDSLIIIDELGRGTSTYDGFG
LAWAISEYIAETIHCFCLFATHFHELTSLSEKNSHVKNLHVEALVKDKDGEGGAKERDIT
LLYQVKEGICDQSFGIHVAELANFPESVVKLAKRKAEELEDFGDDQTRAPSSKFSKTEID
AGTDIVKEFLDTWKSRVSAAGRGGGADAEMAMSEDEMVQLLKDTAEEFKDRLEGNEWVKS
LMSTF
NT seq 2898 nt   +upstreamnt  +downstreamnt
atgcccatgtatgggaacgaatccacctcggcgcccaagccgctcttcgatatggacaag
gacagcgaggaaaaatttgtgcgatttgtggagcgtatgccgactaaattggacggcatg
atcaggctgttcgatcgtggggactactactcggctcacggcgcggacgccatcttcatt
gccaacgaagtctacagaaccacaaatgtcctcaaataccttggttcaggttctaaaccc
tcttcctcttctggacaatatgctcgaggattaccttctgtcaccatatccatggctttg
accaaagctttcctccgggaggcccttacaaccaagcagatgcgtgtcgaaatctacgcc
cccacgggaggagtcgctcctggaagccgaaaggatcattccaaatgggagatctcaaag
acagcttcgcccggcaatctgagccaagtagaagacctgctattcagtgacagagatctg
acagcgaatgcggtctcaatggccatcagggtggtggtcaaagatgggataaacactgtc
ggtgtgggtttcgtagatgtacaagaaaaggtggtaggagtgtctgaattcgttgatgat
gagaacttttcgaacaccgagtcgctattgatccaacttggtgtaaaggaatgtatattg
caagcagatgagaagcgtccagagctggccaaattaaggatgttggtggagtggtgtggt
gtcatcgtcaccgatcgcaaatcgagcgagttccaaaccaaaaatgttgaacaagacctt
aatcggttgttgcacgagtctcatgctggtgccgctttaccggagtttgacctcaaaatc
gccatgtcagctctatcagcacttatcaattatctctcacttctatccgacctctccctc
catggtcaactccgattatatcgtcatgatctttctcagtacatgaagcttgacgcgtcc
gccctcaaggctttgaacctgatgccaaatcctcaagagctgggtggtaacaagaatatg
agcatatatgggttgttaaacagatgcaagactagtcaagggacaaggttgttgggaagg
tggttgaaacagccactggtgaatcgccatgagattattcagagacagactatggttgag
gttttcgttgaggattctgtcaatcgccaatctattcaaacaaagtacctcaagcagatg
cctgactttcacagaatctcgaaaaagttccacaaacgagtggctggattggaagacgtt
gtcagggtgtaccaagctgtgcagctgctgcctggtttgcaggaaattctggaaaatgcc
gacaccccagaaccaggagccagggatcttattgaggaaatttggctcaagcctttacgc
gaacatattgaaaagcttggaaattattcttccatggtagaagacaccatcgatcttgac
gaacttgctaatcacaactatgtgatacttcctactatcgatgaagatcttcagagatac
agagaagagttgttaaacgtgcgagatcagcttgatgatgaacacaggcgagttggaagt
gatctgggtctggatatcgacaagaagcttcatttggagaatcatcaagtttacaagtac
tccttcaggattactaaggcggaggctagcctcattcgtaacaagaaggaatatattgac
ctcgctacccaaaaatctggtaccatattcaccactaaaaccctcaaggcgctgagcgag
gagtacttcagactgcaggagttgtacgagaagcagcaaaggcaccttgtcaaggaggtc
gtctcgatcgcttcctcgtacacaccggttttggaaatgctggataacttgattgcggct
gtcgatgtcattgtcagtatggctcacgtctcttctgaggctcccattccttatgttaaa
cccatcttgactgaaaaaggtaccggtgacgtcgttgttctaggcgcccgtcatccttgt
cttgaagtccaagacgatattgtctttatccctaatgaccatgaaatgcgcaagggtgat
tccgagtttatcatccttaccggaccgaacatgggtggtaaatcgacgtacatccgacag
attggtgtcatcgcccttatggctcaggttggatgctttgtgcccgccacagaagctcgg
ctacccatctttgactgtatccttgcgagggttggtgctggggacaaccaactgaaagga
gtcagtacattcatggccgagatgttggagacggcgaccatcttgagatctgctaccaaa
gactctctgatcatcatcgatgagcttggtcgaggtacatctacatacgatggttttggt
cttgcttgggcaatatcagaatacattgccgaaacgattcactgcttctgtctcttcgcc
acccatttccacgagcttaccagcctttctgaaaagaattctcacgtgaagaacttgcac
gttgaagcccttgtcaaggacaaagatggagaagggggtgcgaaggaaagggacattacg
ttgctgtaccaagtcaaagaaggtatctgtgatcaaagtttcggtatccatgtggccgag
ttggcaaacttccctgagagtgtcgtcaagctcgccaagcgtaaagcggaagagttggaa
gattttggagacgaccaaacccgagccccatcatccaagttttcaaagacggaaatcgat
gctggtacagacatcgtcaaagagttcctcgacacttggaaatctcgcgtctctgccgct
ggaaggggaggaggggcggatgctgagatggccatgagtgaagatgagatggttcagctg
ttgaaggataccgcggaagaattcaaggaccgattggaagggaatgagtgggtgaagagc
ttgatgagcacattctag

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