KEGG   Cryptococcus neoformans var. neoformans JEC21: CNC01550
Entry
CNC01550          CDS       T00243                                 
Name
(RefSeq) conserved hypothetical protein
  KO
K08736  DNA mismatch repair protein MSH3
Organism
cne  Cryptococcus neoformans var. neoformans JEC21
Pathway
cne03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cne00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    CNC01550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cne03400]
    CNC01550
DNA repair and recombination proteins [BR:cne03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     CNC01550
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_II MutS_IV AAA_27 AAA_29
Other DBs
NCBI-GeneID: 3256655
NCBI-ProteinID: XP_024512380
LinkDB
Position
3:complement(join(431459..431678,431731..431809,431863..432032,432073..432196,432247..432257,432319..432401,432457..432482,432536..432632,432698..432929,432981..433025,433083..433147,433208..433309,433368..433746,433799..433864,433920..433929,433980..434032,434087..434136,434186..434232,434280..434360,434413..434663,434712..434838,434889..435103,435157..435282,435344..435409,435463..435491,435542..435563,435609..435624,435674..436434,436506..436528))
AA seq 1191 aa
MPSEGSQQPSLDSFFKRKNPRVEPYSRTGNNAIIDLTDSPPNKKIKLDDEGSQKNRSMTQ
TSSSYFKGHPTARPLSVDKRLPRKPSAAIQAYKLQDVIPPQPSHSGLAFETCSLVPQASF
VPDSQPEPSASPAPQRTTEQLKRHEEWKTRILAMSGSFRRKRSLALDEAVAAEAREAAGL
EDEGTPFDGSDGDDYKSESEKNAEEVGKQLKKYVAKELAGKGKSKGKKKEEIGPSGLAYT
PLEKQFMEIKEQNRDVLLLMEVGYKYKFHGEDAKTASRELGIVAFPNRNFFTASIPTHRL
HIHVKKLLSLGYKVGVITQTETAALKKIGDNRNAPFARKLTHLFTAATYVEDPSLSSSSS
SSSSVRFDDPVVPGTAPPPTNALVAIVEQPVDRASDDRVKVGLVCVVPGTGDITWDEFDD
SQIRTELETRLAHLSPAELLLPKQRLSKATEKVLTYFAGEPKHRGRNAVRIERIDNIPEY
DAAFDFLTNFYHCKEHKATVSKGDVNDERHLMTEGNKQWSLQPKLSQDGADISLDEEIYL
ASGVSSSKAILTLVDFPKQVVISMAVAIRYMKRFGLENAFKHTSSFVRFANRSHMLLSSN
TLANLEIYQNQTDGGLYGSLIWLLDHCKTRMGKRLLREWVGRPLLDVAALKARADAIEEI
MENNSYHMEKLRSLLINMPDLVRGLTRVQYGKATPNELATLLITLVRLASEFKPNMGNVF
RSCLLNNIPNTLPTILDTSQRFLNALNLKQARENDVANLWADPDRFPDIQDVKDCISVCE
MELNEHLMELRKILKKPTLRYITVSGIEYLVEVPIRDTKIVPAQWMKISATRTVNRYHTP
KILAITKERTQHLEKLSIVAREAFIAFQSEVAEYHELVVVSKQIAVIDCLMSLAQTAAAS
GYCKPKFVAEPELKILAGRHPMVEMLREESYVPFDIHFSKEEGTTKIITGPNMAGKSSTV
RAMALIVCMAQIGSFVPAASVTLSVHDSVQTRMGASDEIGRGKSTFMVELSETSDILQTI
TPRSLVVLDELGRGTSTYDGIAIAYATLSHIAEIGCNTLFVTHYPTVAQDLAREKPDKIS
NWHMSFDEIQMPDGGAEITFLYQLTRGLQEASFGVWCARLAGLPKPILDTAQMRSSSLKA
ETQERLRGIVARRVGWMLHNLFDNKTSSSQVLRNVEMLHNSLSSSSISFSQ
NT seq 3576 nt   +upstreamnt  +downstreamnt
atgccttccgaaggctctcaacaaccatcccttgactctttcttcaagcgtaaaaatcct
cgagtcgagccatactcaaggaccggcaataacgctattatagacctcacagactcccct
ccaaacaaaaaaatcaaacttgatgatgagggcagtcagaaaaatcgatctatgacacag
acgtcttccagttatttcaaaggacaccccacagcgagacctctctcggtagataaaagg
ctgcctcgcaagccatcggctgccatccaagcttacaagcttcaagatgtaataccgccg
caaccctctcattcaggtttagcttttgaaacatgctctttagtccctcaagcgtcgttc
gtgccagattctcaacctgagccgtcagcaagtcctgcaccacaacgcaccacagaacag
cttaagaggcatgaagaatggaagactaggatccttgccatgagtggttcgtttcgacga
aaaaggtctttggctctagatgaggcagttgcggcggaggcaagggaagctgctggtcta
gaagacgaaggcactccctttgacggcagtgatggggacgactataagagcgaaagcgaa
aagaatgcagaagaagtgggaaagcagcttaaaaaatacgttgctaaagagctagcaggg
aaagggaaaagtaaagggaaaaagaaggaggaaatagggcctagcgggttagcatacacg
cctttagagaagcaattcatggaaatcaaggagcaaaacagggacgttctccttcttatg
gaagtggggtataagtacaaatttcacggcgaagacgcaaaaacagccagtcgcgaatta
ggcatcgttgcctttcctaacaggaattttttcactgcgtcgatacccactcatcgactg
cacatacatgtcaaaaaactgctgtcattgggatacaaagtgggcgtgattactcagaca
gaaacggcggcccttaaaaagattggcgataacaggaatgccccgtttgctcgcaaactc
actcaccttttcactgctgccacctatgtcgaagatccctctctatcatcatcatcgtca
tcatcttcatccgtccgctttgatgatcctgtcgtccctggcaccgctcctccacctaca
aatgctctcgttgctatcgtggaacagcctgtggatagggccagcgatgacagagttaag
gttggcctagtttgtgtcgtcccagggacaggagatatcacatgggatgaatttgacgac
tctcaaattcggacagaattggaaacccgccttgctcacctatcacctgccgaacttctt
cttccaaagcagaggcttagcaaggcgacggagaaggtgctgacgtatttcgctggcgaa
ccgaaacatcgaggcagaaacgctgtccggattgaaaggatagacaatattccagaatac
gatgcggcgtttgattttctgacgaatttctatcattgtaaagagcacaaagctacagta
tccaaaggggatgtgaatgatgaacggcaccttatgacagagggaaataagcaatggagc
ttgcaacccaagttgagccaggatggggcagatatctcattggatgaagagatctatcta
gcatccggtgttagctctagcaaagcaatcctaaccctagttgattttcccaaacaagtc
gtgatctccatggctgtcgctattcgatacatgaaaaggttcggtttggaaaatgctttt
aagcatacttcctcgtttgtcagatttgcaaaccggtctcatatgttactgtcaagtaac
actctggccaatttagagatctatcagaaccagactgatggaggattgtatggaagcctg
atttggttgcttgaccactgcaagacccgcatgggcaagcgtcttcttcgcgaatgggtg
ggaagaccattacttgatgttgcggccttgaaagctcgggccgacgccattgaagaaatc
atggaaaataatagctaccatatggagaaacttcgcagccttttgatcaacatgccggat
cttgttagaggcctaactcgagttcagtatggaaaagcaacgccgaacgagctcgcgact
ttacttattaccctcgtacgcttggcttcagagttcaagcccaacatgggcaatgttttc
cgatcatgccttttaaacaacatacccaatacgctgccgacaattctagatacttcccaa
agatttctaaatgccttgaacttaaaacaagcaagggaaaatgacgtggccaatttatgg
gctgacccagaccgattcccggatatacaggatgtcaaagattgtataagcgtctgcgag
atggagttgaacgaacacctcatggaattgcggaaaatactgaaaaagcctacacttagg
tatattacagtctcgggcattgagtatcttgtggaagttccaatccgagatacgaaaatc
gtacctgctcagtggatgaaaattagcgccactaggactgttaatcgatatcatactcct
aaaatccttgcaatcacgaaagagagaacacagcatctagagaagctgtctattgtcgct
cgtgaagcatttatagccttccagtctgaagttgccgaatatcatgagcttgttgtggtt
tccaaacaaattgccgtcatcgactgtctgatgtccctggctcaaacggctgctgcctcc
ggatactgtaaaccgaaatttgtagctgaaccggagctgaaaatattagctggcagacac
ccaatggtggaaatgctcagagaagagtcatatgtcccatttgatatccacttttcgaaa
gaggagggaacgaccaaaattatcactgggccgaatatggcaggtaaaagttcgactgtt
cgtgcgatggccttgatcgtatgtatggcacaaatcggatctttcgtgcctgcggcctcc
gtgacacttagtgtacatgattctgttcaaacgaggatgggggcttctgatgaaattgga
cgagggaagtccacgttcatggtagaattatcagagacgagcgacattcttcaaaccata
acaccaagatctttggtagttttggatgagctcggccggggaacaagtacttacgatggc
attgctattgcttatgctactttgtcgcacatcgccgagatcggatgtaacacgctattt
gtcacacattatcctacggttgcgcaggacttggccagagaaaagcctgacaaaattagt
aactggcacatgagttttgacgagattcagatgcctgatggcggtgcagagatcactttc
ttgtatcagctcacacgcggattacaagaggcctcttttggagtatggtgtgctcgattg
gcaggtctaccaaaacctatcctcgacactgctcaaatgcggtccagttctctcaaggca
gagacgcaagaaagattgagaggtatagtggcaagaagggttggttggatgctgcacaat
ctgtttgacaacaaaaccagctccagccaagtgctcaggaatgtagagatgttgcacaac
tctttgtcttcaagttctatttcattctctcagtag

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