Cryptococcus neoformans var. neoformans JEC21: CNG03015
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Entry
CNG03015 CDS
T00243
Name
(RefSeq) hypothetical protein
KO
K14328
regulator of nonsense transcripts 3
Organism
cne
Cryptococcus neoformans var. neoformans JEC21
Pathway
cne03013
Nucleocytoplasmic transport
cne03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CNG03015
03015 mRNA surveillance pathway
CNG03015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cne03019
]
CNG03015
Messenger RNA biogenesis [BR:
cne03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
CNG03015
mRNA cycle factors
P-body specific factors
CNG03015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
36392948
NCBI-ProteinID:
XP_024514558
LinkDB
All DBs
Position
7:complement(join(836293..837134,837184..837252,837305..837403,837450..837562,837614..837774))
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AA seq
427 aa
AA seq
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MAPQLSTAAPRNKLVIRRLPPTLPEDIFWQSVSAWITDKNCLWKSFIKGKAGDSNYDSHP
VYSRAYVLMADPESLVNFHRAFDGHIYKSKTGSEFQAVVEYAPFQKAPLKTKVKVDNRQG
TIDEDPDYLSYIQTLNAPVTKPVLEVATPVAQPTTTPLLEHLRSQKSASKNKSKAAKTAQ
NQAQSSATAPESARRAAALASINAASQRRGGQTNTGPVMVAGKGREVMITPSSTPPVPDG
AKQKQQGEQAQQGAKPEQADKDKKSRGGRKRNKGKDKQKEGVNSVPSGRQTPSAPSASST
TTQAPLSGRPVRSARIDNPVPNVPSQSQFVPAPKTASGSARAPQAPAGKSGPGAGNNGEP
RGNESGRGRQRGGRGRGGGGQPKTSSAGPQVKILSRNPVPPVGSGPRRGDREGAGSDAGA
AFARIDM
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgccacagctctcgactgctgcgcctcgcaacaaactcgtcatccgccgtcttccg
cccactttgcccgaagacattttttggcaatcagtctcagcatggattactgacaagaat
tgtctctggaaaagtttcataaaaggaaaggcaggcgacagtaattacgactcccacccc
gtctattccagggcatacgtgttgatggcggatcccgaatccttggtaaacttccatcgt
gcctttgatggacacatctacaaatcgaagactggttccgagttccaagctgtcgtcgag
tatgctccgtttcaaaaagctcccctcaagacgaaagtgaaagttgacaaccgacaaggt
acaattgacgaagatccagactatttgtcatacatccaaactcttaatgcgccagtcaca
aagcctgttctggaagttgccacgccggtcgcccagcccactacaactcccctcctcgag
catctccgctctcaaaaatcagcaagcaagaacaagtccaaggcagccaagactgctcaa
aatcaagcccaatcatccgctactgcacctgaatctgctcgacgagcggccgctctagct
tctatcaacgctgcttcgcagcgacgcggtggtcagacaaacaccggcccagtcatggtg
gctgggaaaggtagagaagtgatgatcactccttcttcgacaccccctgtgcctgatggc
gctaagcaaaagcagcagggcgaacaggctcaacaaggcgccaaacccgagcaagcggac
aaggataaaaagtcaagaggcggaagaaagaggaataaaggaaaggataaacaaaaggaa
ggagtgaatagcgttccgagcgggcgacaaactccttcagccccatctgcttcgtcaacg
acaacccaagcgcccttaagtggtagacctgtacgatcagcacgcatcgataatcctgtc
cctaacgtgccctcacagagccaatttgtccctgccccaaaaacagcttctggttccgcc
agggctccacaggctccagcaggaaaatctgggccaggtgctggtaataacggcgaaccg
agaggtaatgagtctgggcgtggaagacaacgcggtggtaggggacggggaggtgggggc
cagccgaaaacatcttctgcaggcccccaagtcaagattttatcacgaaatccagttccg
ccggtcggatcgggtccccggcgtggcgatagggaaggggctggttctgatgctggcgct
gcttttgctcgtatcgacatgtaa
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