Cryptococcus neoformans var. grubii H99: CNAG_01199
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Entry
CNAG_01199 CDS
T08175
Name
(RefSeq) nuclear pore complex protein Nup62
KO
K14306
nuclear pore complex protein Nup62
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CNAG_01199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cng03019
]
CNAG_01199
Messenger RNA biogenesis [BR:
cng03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CNAG_01199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
AAA_13
Synaptonemal_3
CHAD
COG3_N
TACC_C
Exonuc_VII_L
DUF724
Motif
Other DBs
NCBI-GeneID:
23884940
NCBI-ProteinID:
XP_012049027
UniProt:
J9VQT0
LinkDB
All DBs
Position
5:complement(942407..945014)
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AA seq
746 aa
AA seq
DB search
MAAPNPFAGFGSKPQPSASGNSLFGNTSSQPSSGGGLFGSSSTTNNSTAAPAASGGGLFG
GGTQTSGGLFGNNTATSTNSNNNPATAAANSSTPAAPSGGSLFGGFGTNNTATGSTTPAS
KPAFGGFGQSTTPAAAPPASTGASLFGGAATGTSTGGGLFGAKPAEGTGASGAASTTGGF
AGFGAKPAGTTSAPTAGGLFGSKPAESASAASASPAPSSGGGLFSFGAKPATTTTPAAPS
LFGSAPAKDASSSTPASGTPPTTSGGGLFGGGGLFGAKPAPPATEAPKADTASAAPAAPA
GGLFGGVGASKPAEAPKPAAGGFSFGNLGSKPATPSTTEAPKTGGFSFGASAPSTDKKDE
KPAEAPKTGGFSFGAPATTASNEEKKTDKPAEAPKTGGFSFGNIGTSATTASGDDKGKAP
EAPKAGGFSFGGLGAKADGDKDKTPAAPAPAPAAGGLFGAKPGDAGQSATTTAAPPASGG
LFGAKPSTTASASITTPAVPTAPTASAPANVEKPSEPAPNLLRGKALDDIVEGWNKDLEE
QVREFERQAGEVREWDKILVRNGNQITALRRQVLEAQQTQAAVDEPLNYFEAQQNQLESM
LDVYEKEIAKMSNDSTRPLAAKMPADREREKAYTLAEDLNKQLDDLSRNLSQMIEQVNKI
STSQSSLDASTSSLTNRPGTPSASAADAASQMPDDPVSQLSAILGAHLRALSSIDSSAGK
LSTKVGELETKMGSSGSARGWGLPRR
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggccgctccaaacccctttgcaggcttcggctcaaaaccccaaccctccgcttccggt
aactcactatttggaaacacttcgtctcaaccctcttccggtggcggcctattcggctcg
tcatctaccacaaacaactccactgctgcccctgccgcctccgggggcggcttatttggc
ggcgggacacaaacttctggcggtttgtttggaaacaacaccgccaccagcacaaacagt
aacaataacccagcaacggcagctgcaaacagctcgactcctgcagcaccctctggaggt
agtctatttggagggtttggaacgaacaatacggctactgggtccacgactccagcttct
aaacctgcctttggtggctttggtcaatccactacaccagccgcagctcctcctgctagt
acaggggcaagcttatttggaggcgctgctaccggcacaagcacaggtggtggcttgttc
ggtgctaaacctgcagaaggcactggagcatctggcgcagcgtcaacaacgggaggattt
gcagggtttggtgcaaaacctgccggcaccacgtctgcgcctacagcaggtggacttttt
ggttcaaaacctgcagaatctgcttctgccgcttctgcttctcctgcgccctcatccggt
ggtggcctcttttcattcggtgctaaacccgccaccactacaacgcctgctgccccttcg
cttttcggctctgctcctgccaaggatgcttcttcatcaactcccgcatctggcacacca
cctactacatctggaggtggactttttggcggcgggggtctttttggtgccaagcccgct
cctcctgctacagaggctcctaaagctgacaccgctagcgctgccccggccgctccagcc
ggtggtctgtttgggggagtaggtgcctcgaaacccgctgaagcacctaaacccgctgct
ggagggttctcgttcggtaacctgggatccaaacctgctactccttctaccactgaagct
ccaaaaacaggaggtttcagctttggagcttctgccccaagcactgataagaaggatgag
aagccggctgaagcgcccaagacgggagggttcagttttggcgcccccgctactactgct
tccaacgaagaaaagaagactgataagcctgcagaggctcccaaaacaggtggattcagc
tttggtaacattggtacatccgcaacaaccgcctccggagatgataaaggcaaggcgcct
gaggctcctaaggctggcggattcagttttggtgggcttggtgcaaaggcagatggtgac
aaggataagactccggctgcgcctgcgcctgcgcctgctgctggtggtttgtttggagcc
aagcccggtgatgctggtcaaagcgccaccaccaccgccgcccctccggctagcggtggt
ctctttggtgctaagcccagcactaccgcatcggcttctatcactacacctgctgtacca
actgctcccactgcttccgccccagccaatgtggagaagcccagcgaacccgctcccaac
cttcttcgcggcaaagctttggatgatatagtggaaggatggaataaggatttagaagaa
caagtgagggagtttgagaggcaggcaggagaggtgagggaatgggataagattttggtc
aggaatggtaaccagattacagcccttagaagacaagtgttggaggctcagcagacccaa
gctgctgtcgatgaaccgttgaactactttgaggctcagcaaaatcaattggagagtatg
ttggatgtgtatgagaaggagattgcaaaaatgtcaaacgacagcaccaggccgttggcg
gcgaagatgccggctgatcgagaacgggagaaggcttacacacttgccgaggatcttaat
aaacagcttgatgatctgtctcgtaacctgtcacagatgattgaacaagtaaacaaaatt
tcgacctcccaatcatccctcgacgcaagcacgtcctctcttacgaaccgtcccgggaca
ccctcggcgtctgctgctgatgcagcttcacaaatgccagatgacccagttagccagctt
tctgctattcttggcgcccacttgagggcattgagctcaatcgactccagtgcgggcaaa
ctatctaccaaggttggagaattggaaaccaagatgggcagtagcgggtctgcccgggga
tggggattacccaggagatga
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