Cryptococcus neoformans var. grubii H99: CNAG_01342
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Entry
CNAG_01342 CDS
T08175
Name
(RefSeq) hypothetical protein
KO
K18716
nucleoporin NUP42
Organism
cng
Cryptococcus neoformans var. grubii H99
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cng03019
]
CNAG_01342
Messenger RNA biogenesis [BR:
cng03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CNAG_01342
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf-CCCH
zf_CCCH_4
zf-CCCH_2
Nucleoporin_FG
Torus
Motif
Other DBs
NCBI-GeneID:
23885066
NCBI-ProteinID:
XP_012049481
UniProt:
J9VKN0
LinkDB
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Position
5:547955..550178
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AA seq
577 aa
AA seq
DB search
MASAQVCRNYLNGNCRYGNSCKFYHPPRTAQSNPPTLKLPFQFTEDTIRSDLTVELPQWI
LSVYGAAKHEPNLIYEGELSPEELRWRSALALKEGKVQDYVREEESLVSNAKAKIASLVA
DLSATNKLAQKLHQMRFANGQHPGAPRPRDFSETAVVPSIQPFSPSGMANEPRPGNTSFG
ARSNVSAFGGGNSSSFGSGGSAFGAVNRVNPFSTAAAGGGTSSGSAFGQSAFGAGKPPAF
GSSAFGGGSQTGSTFGSSDTPTVSGGGAFGQTAFGQKSAGVPAFGTSAFGLTNSSTKSAF
GSSAFGQSAKPSVPSFGSSSPLSTFNQDSKPMKSAFGSSQAPSAFASTPQNTATPMPGTA
FGQSAFGNPPMTTAVNPAATSVFGQSAFGQEAKQNPFGTQPRETVASGSGFGLNQPASPV
TSGFGSFANTASTSTNPFGQSSVMTVAAPANAFGKSANVTHPTSFNSFAAPSTSAFGSTS
AFGATPSKSAFGFTNASDSRSPANSYSPLNSAFKQPQLSVPVPPGWSYDDPWTWLLYGNA
GTDNGGTLEEEFIDAFKQATFSLGNIPSMPPPLDLRT
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgctcaggtttgccgcaactatctcaatggcaactgccgctatggaaactcc
tgcaagttctatcatccaccaaggactgctcagagcaacccgccaacacttaagttacca
ttccagttcactgaggatacgatccgtagtgacctgaccgtcgaactacctcaatggata
ctttctgtttatggcgccgccaagcatgaacccaacctcatttacgagggcgaactctcg
cccgaggaacttagatggagaagtgctctggccttgaaagaagggaaagtgcaggattat
gttagggaagaagaatctcttgtctccaatgccaaagcaaaaattgccagcttagtcgcc
gacctttcggcgacgaataaattggcccaaaagctgcatcaaatgaggtttgccaatggt
caacaccccggagcccctcgcccgagagacttctcggaaactgccgtcgtaccatctata
cagcctttctccccttcggggatggctaatgagccacggcccggtaatacatcgttcggt
gcaagatcgaatgtgtcggctttcggaggtggaaatagttcgtcattcgggtcaggggga
tcagcgtttggagcagtgaatagagtcaacccattcagcacagctgctgctggtggtggc
acctcatcaggcagtgcttttggtcaaagtgcttttggcgcaggcaagcctcctgcgttc
ggttccagtgcttttgggggcggatctcaaaccggctctactttcggttcatctgataca
ccaactgtgtcgggtggtggcgcattcggacagaccgcttttggccaaaaatctgctggg
gttcctgcatttggtacgtcagctttcggcctcactaattcttcaacgaaatccgctttt
gggtcatcagcttttggacaaagcgcaaaaccttcagtcccctccttcggctcttctagc
ccattatcgactttcaaccaggacagcaaaccaatgaaatctgcttttggctcctcgcaa
gcaccgtcggcttttgcctctacaccacaaaacacagctactcccatgcctggtacggca
tttggtcagtctgcatttggtaaccctccaatgacgactgctgtcaatccagcagctact
tcggtattcggtcaatctgcatttgggcaagaagcaaagcaaaacccattcggaacgcag
cctcgagagactgtagcttctggctccggctttgggctcaatcaacctgcctctcctgtg
acgagcggttttggctctttcgccaataccgcctccacctcaaccaatccctttggtcaa
tcctcagtcatgacagtggctgctcctgcaaatgcttttggcaaatctgcgaacgttacg
caccctacgtctttcaattcgtttgctgcaccttcaacgtcggcgtttggatcaacttcc
gccttcggtgccacgccttccaaatcagcgtttggctttaccaatgcttctgatagcaga
tctcctgctaatagctattcgccattaaattctgcattcaagcagccgcaactatctgtg
cctgtccctccaggatggtcgtatgatgatccttggacatggcttttatatggaaacgca
ggaacagataatggcggtactctggaagaagaattcattgatgcgttcaagcaagcgaca
ttctctttgggcaatataccttctatgccacctcctcttgatttaagaacatga
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