Clostridium neonatale: CNEO_4483
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Entry
CNEO_4483 CDS
T08280
Symbol
ung
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cnn
Clostridium neonatale
Pathway
cnn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cnn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CNEO_4483 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cnn03400
]
CNEO_4483 (ung)
Enzymes [BR:
cnn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CNEO_4483 (ung)
DNA repair and recombination proteins [BR:
cnn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CNEO_4483 (ung)
Prokaryotic type
CNEO_4483 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Orbi_VP2
Motif
Other DBs
NCBI-ProteinID:
CAH0439001
LinkDB
All DBs
Position
CNEO:4479986..4480663
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AA seq
225 aa
AA seq
DB search
MSEILKNDWKNYLNTEFEKDYYLKLREFLKNEYNSKVIYPNMYDLFNALHFTSYEDTKVV
ILGQDPYHGPKQAHGLSFSVNPGVKTPPSLVNIYKELHDDLGCYIPNNGYLKKWADQGVL
LLNTVLSVRAGEANSHRNKGWEQFTNRVIEVLNQKETPIVFILWGNNAISKTSLITNPKH
FIIKSVHPSPLSASRGFFGSKPFSKANEFLISTNQKPIDWQIENI
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaatactaaaaaacgattggaaaaactatttaaatactgaatttgaaaaagac
tattatttaaaattaagagaatttttaaaaaacgaatataattccaaagtaatttatcct
aatatgtatgatttatttaatgccttacattttacaagttatgaggatacaaaggttgtc
atattaggccaagatccatatcacgggcctaaacaagcacacggattaagtttttctgtt
aaccctggagttaagacaccaccatctttagttaatatttataaagaactacatgatgat
ttaggttgttatattcctaataatggctacttaaagaaatgggctgatcaaggagtatta
ttattaaatacagtattaagcgtaagagctggtgaagccaattctcatagaaataaagga
tgggaacaattcactaatagagttatagaagttctaaaccaaaaagaaactcctatagta
tttatattatggggtaataatgctatatcaaaaactagtttaataacaaatccaaagcat
tttataattaaatcagtacatcctagtcctttgtctgcatcaagaggattctttggtagt
aaacctttttctaaagcaaatgagtttttgatatcaacaaatcaaaaacctattgattgg
caaatagaaaatatttaa
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